BLASTX nr result

ID: Coptis25_contig00025386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025386
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154994.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    84   9e-15
ref|XP_004138142.1| PREDICTED: uncharacterized protein LOC101216...    84   9e-15
ref|XP_002266231.1| PREDICTED: uncharacterized protein LOC100258...    84   9e-15
ref|XP_002511488.1| conserved hypothetical protein [Ricinus comm...    82   5e-14
emb|CAN75379.1| hypothetical protein VITISV_027594 [Vitis vinife...    81   1e-13

>ref|XP_004154994.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101216066
           [Cucumis sativus]
          Length = 388

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = -1

Query: 271 RRRRREKMVAISLYRGNLHRVPDVTRRWLMPSQSISLKNFKSLLNKRQKTLSRINSNTAA 92
           R R  E MVAISLYRGNLHRVPD+ RRWLMP+ +IS+K+FKSLL++R K LSR+ +  ++
Sbjct: 17  RAREEESMVAISLYRGNLHRVPDIPRRWLMPTHNISIKDFKSLLHRRSKALSRLRAPASS 76

Query: 91  T 89
           +
Sbjct: 77  S 77


>ref|XP_004138142.1| PREDICTED: uncharacterized protein LOC101216066 [Cucumis sativus]
          Length = 388

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = -1

Query: 271 RRRRREKMVAISLYRGNLHRVPDVTRRWLMPSQSISLKNFKSLLNKRQKTLSRINSNTAA 92
           R R  E MVAISLYRGNLHRVPD+ RRWLMP+ +IS+K+FKSLL++R K LSR+ +  ++
Sbjct: 17  RAREEESMVAISLYRGNLHRVPDIPRRWLMPTHNISIKDFKSLLHRRSKALSRLRAPASS 76

Query: 91  T 89
           +
Sbjct: 77  S 77


>ref|XP_002266231.1| PREDICTED: uncharacterized protein LOC100258784 [Vitis vinifera]
          Length = 739

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/61 (65%), Positives = 50/61 (81%)
 Frame = -1

Query: 265 RRREKMVAISLYRGNLHRVPDVTRRWLMPSQSISLKNFKSLLNKRQKTLSRINSNTAATS 86
           RR+ +MVAISLYRGNLHRVPDVTRRWLMP+  ISLK+F+SLL++R   LSR+ S    +S
Sbjct: 374 RRQIEMVAISLYRGNLHRVPDVTRRWLMPTNGISLKDFRSLLSRRSAALSRLRSAAGTSS 433

Query: 85  D 83
           +
Sbjct: 434 N 434


>ref|XP_002511488.1| conserved hypothetical protein [Ricinus communis]
           gi|223550603|gb|EEF52090.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
 Frame = -1

Query: 265 RRREKMVAISLYRGNLHRVPDVTRRWLMPSQSISLKNFKSLLNKRQKTLSRINSN---TA 95
           R +  MVAISLYRGNLHRVPDV RRWLMP++ ISLK+FKSLL++R K LSR+ S+     
Sbjct: 24  RGKANMVAISLYRGNLHRVPDVPRRWLMPTRQISLKDFKSLLSRRTKALSRLPSSAVTAV 83

Query: 94  ATSDEFVGD 68
           AT+  ++ +
Sbjct: 84  ATTSYYISN 92


>emb|CAN75379.1| hypothetical protein VITISV_027594 [Vitis vinifera]
           gi|297734055|emb|CBI15302.3| unnamed protein product
           [Vitis vinifera]
          Length = 361

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/56 (67%), Positives = 46/56 (82%)
 Frame = -1

Query: 250 MVAISLYRGNLHRVPDVTRRWLMPSQSISLKNFKSLLNKRQKTLSRINSNTAATSD 83
           MVAISLYRGNLHRVPDVTRRWLMP+  ISLK+F+SLL++R   LSR+ S    +S+
Sbjct: 1   MVAISLYRGNLHRVPDVTRRWLMPTNGISLKDFRSLLSRRSAALSRLRSAAGTSSN 56


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