BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025382
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251...   197   2e-48
emb|CBI25450.3| unnamed protein product [Vitis vinifera]              197   2e-48
emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]   197   2e-48
ref|XP_002512332.1| pentatricopeptide repeat-containing protein,...   180   2e-43
ref|XP_002879856.1| pentatricopeptide repeat-containing protein ...   177   2e-42

>ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251820 [Vitis vinifera]
          Length = 613

 Score =  197 bits (500), Expect = 2e-48
 Identities = 98/203 (48%), Positives = 144/203 (70%)
 Frame = -2

Query: 612 NETNFYPFTKTPKRFDTDIPTSAFYDKLIDEAGRSRDHTTLYRLLNKRYKDGCFNTSKTF 433
           N + F+  T+ P  ++   PT A+YD LI+ AGR+RD  ++  LLNKR +DGCFNT+ TF
Sbjct: 20  NTSRFFN-TQNPNPYE---PTVAYYDNLINTAGRNRDFASVCNLLNKRVRDGCFNTNHTF 75

Query: 432 KFLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDCVNESVRVIESMIEK 253
            F+T T+A  +  LD+L   +  +DKGF RK+A+D LI  LC+   V+ES+R++++M++ 
Sbjct: 76  DFITNTDAGLSV-LDELSQALAHLDKGFLRKSAYDSLIARLCRLKRVDESLRLVDTMVQS 134

Query: 252 EVGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMGHCFEGDMKKA 73
           + GVNA TF P+LN LTRKR+++EAW V+  MRE  V  D+TAYN++L  +CF G+++ A
Sbjct: 135 DHGVNACTFHPILNVLTRKRKMEEAWRVMTIMRESGVSPDVTAYNYLLTAYCFTGNLEAA 194

Query: 72  VEVLEKILEQGLKVDTRTYDALV 4
           V VL ++ E+G+  D RTYDALV
Sbjct: 195 VGVLTEMEEEGMAADARTYDALV 217


>emb|CBI25450.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  197 bits (500), Expect = 2e-48
 Identities = 98/203 (48%), Positives = 144/203 (70%)
 Frame = -2

Query: 612 NETNFYPFTKTPKRFDTDIPTSAFYDKLIDEAGRSRDHTTLYRLLNKRYKDGCFNTSKTF 433
           N + F+  T+ P  ++   PT A+YD LI+ AGR+RD  ++  LLNKR +DGCFNT+ TF
Sbjct: 20  NTSRFFN-TQNPNPYE---PTVAYYDNLINTAGRNRDFASVCNLLNKRVRDGCFNTNHTF 75

Query: 432 KFLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDCVNESVRVIESMIEK 253
            F+T T+A  +  LD+L   +  +DKGF RK+A+D LI  LC+   V+ES+R++++M++ 
Sbjct: 76  DFITNTDAGLSV-LDELSQALAHLDKGFLRKSAYDSLIARLCRLKRVDESLRLVDTMVQS 134

Query: 252 EVGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMGHCFEGDMKKA 73
           + GVNA TF P+LN LTRKR+++EAW V+  MRE  V  D+TAYN++L  +CF G+++ A
Sbjct: 135 DHGVNACTFHPILNVLTRKRKMEEAWRVMTIMRESGVSPDVTAYNYLLTAYCFTGNLEAA 194

Query: 72  VEVLEKILEQGLKVDTRTYDALV 4
           V VL ++ E+G+  D RTYDALV
Sbjct: 195 VGVLTEMEEEGMAADARTYDALV 217


>emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]
          Length = 330

 Score =  197 bits (500), Expect = 2e-48
 Identities = 98/203 (48%), Positives = 144/203 (70%)
 Frame = -2

Query: 612 NETNFYPFTKTPKRFDTDIPTSAFYDKLIDEAGRSRDHTTLYRLLNKRYKDGCFNTSKTF 433
           N + F+  T+ P  ++   PT A+YD LI+ AGR+RD  ++  LLNKR +DGCFNT+ TF
Sbjct: 20  NTSRFFN-TQNPNPYE---PTVAYYDNLINTAGRNRDFASVCNLLNKRVRDGCFNTNHTF 75

Query: 432 KFLTETNAHFNTDLDDLVHIICKVDKGFARKNAFDCLITCLCKSDCVNESVRVIESMIEK 253
            F+T T+A  +  LD+L   +  +DKGF RK+A+D LI  LC+   V+ES+R++++M++ 
Sbjct: 76  DFITNTDAGLSV-LDELSQALAHLDKGFXRKSAYDSLIARLCRLKRVDESLRLVDTMVQS 134

Query: 252 EVGVNAVTFWPLLNTLTRKRRIDEAWGVVEKMREYNVCVDITAYNFILMGHCFEGDMKKA 73
           + GVNA TF P+LN LTRKR+++EAW V+  MRE  V  D+TAYN++L  +CF G+++ A
Sbjct: 135 DHGVNACTFHPILNVLTRKRKMEEAWRVMTIMRESGVSPDVTAYNYLLTAYCFTGNLEAA 194

Query: 72  VEVLEKILEQGLKVDTRTYDALV 4
           V VL ++ E+G+  D RTYDALV
Sbjct: 195 VGVLTEMEEEGMAADARTYDALV 217


>ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548293|gb|EEF49784.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  180 bits (457), Expect = 2e-43
 Identities = 81/186 (43%), Positives = 132/186 (70%)
 Frame = -2

Query: 561 DIPTSAFYDKLIDEAGRSRDHTTLYRLLNKRYKDGCFNTSKTFKFLTETNAHFNTDLDDL 382
           D PT+A+YD L++ AG  RD  TL+ LLNKR +D CFNT+ TFKF+T T+   +  LDDL
Sbjct: 323 DKPTAAYYDGLVNAAGHERDFKTLHHLLNKRVRDHCFNTTNTFKFITNTDNSLSV-LDDL 381

Query: 381 VHIICKVDKGFARKNAFDCLITCLCKSDCVNESVRVIESMIEKEVGVNAVTFWPLLNTLT 202
           +  + ++DKG  R +A++ LI  LCK D + ES+ ++  M +++ G++  +F P+L++LT
Sbjct: 382 IQTLARLDKGIPRMSAYNMLIARLCKLDRIQESLHIVHIMADEQYGLSTCSFHPILSSLT 441

Query: 201 RKRRIDEAWGVVEKMREYNVCVDITAYNFILMGHCFEGDMKKAVEVLEKILEQGLKVDTR 22
           +K++++++W V+E MR   V  D+TA+N++L  +C+ G++  A +V+++I E+GL  D R
Sbjct: 442 QKKKMEDSWKVIEMMRAIGVLPDLTAFNYLLTAYCYNGNLVDACKVMKRIEEEGLGADAR 501

Query: 21  TYDALV 4
           TYDALV
Sbjct: 502 TYDALV 507


>ref|XP_002879856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325695|gb|EFH56115.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 338

 Score =  177 bits (449), Expect = 2e-42
 Identities = 89/179 (49%), Positives = 126/179 (70%)
 Frame = -2

Query: 540 YDKLIDEAGRSRDHTTLYRLLNKRYKDGCFNTSKTFKFLTETNAHFNTDLDDLVHIICKV 361
           +DKLI+EAG S D  T+ RLLN R   G FNTS+TFKFLT T   +++ L+D+  ++ ++
Sbjct: 42  FDKLINEAGSSGDFETVRRLLNNRIVLGSFNTSETFKFLTNT-VSYSSALEDIRRVLPQI 100

Query: 360 DKGFARKNAFDCLITCLCKSDCVNESVRVIESMIEKEVGVNAVTFWPLLNTLTRKRRIDE 181
           D GF+RKNA+D LI+ LCK   +N+++ VI  M    + +   TF P+L +LTRK +IDE
Sbjct: 101 DGGFSRKNAYDILISRLCKLGRINDALIVIGDMSNGRLSLTPSTFHPILCSLTRKNKIDE 160

Query: 180 AWGVVEKMREYNVCVDITAYNFILMGHCFEGDMKKAVEVLEKILEQGLKVDTRTYDALV 4
           AW VVE MR  +V +D+TAYN+ L  HC++G+M+ A EV+ KI E G+  D+R+YDALV
Sbjct: 161 AWRVVESMRSKSVPMDVTAYNYFLTSHCYDGEMESASEVMRKIEEDGISTDSRSYDALV 219