BLASTX nr result

ID: Coptis25_contig00025376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025376
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82493.1| hypothetical protein VITISV_017203 [Vitis vinifera]    63   3e-08
ref|XP_003635418.1| PREDICTED: probable xyloglucan glycosyltrans...    62   6e-08
emb|CBI35705.3| unnamed protein product [Vitis vinifera]               62   6e-08

>emb|CAN82493.1| hypothetical protein VITISV_017203 [Vitis vinifera]
          Length = 1172

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/69 (49%), Positives = 44/69 (63%)
 Frame = -2

Query: 207 FV*RTLLMAPPNYEFQEWWNKERAKNNELFLDPTSSHNSNLEIHTQINTNDQDHSVGKEH 28
           F  R  +  P NYEFQEWWNK+R K+++LF+D   S    L    +I+T   D +V KE 
Sbjct: 60  FFPRFCMSRPQNYEFQEWWNKQREKHHDLFID--KSETQRLFTSVEIHTPTADPAVDKE- 116

Query: 27  RTRNARQLS 1
           RTR+ARQLS
Sbjct: 117 RTRSARQLS 125


>ref|XP_003635418.1| PREDICTED: probable xyloglucan glycosyltransferase 6-like [Vitis
           vinifera]
          Length = 688

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = -2

Query: 180 PPNYEFQEWWNKERAKNNELFLDPTSSHNSNLEIHTQINTNDQDHSVGKEHRTRNARQLS 1
           P NYEFQEWWNK+R K+++LF+D   S    L    +I+T   D +V KE RTR+ARQLS
Sbjct: 4   PQNYEFQEWWNKQREKHHDLFID--KSETQRLFTSVEIHTPTADPAVDKE-RTRSARQLS 60


>emb|CBI35705.3| unnamed protein product [Vitis vinifera]
          Length = 630

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = -2

Query: 180 PPNYEFQEWWNKERAKNNELFLDPTSSHNSNLEIHTQINTNDQDHSVGKEHRTRNARQLS 1
           P NYEFQEWWNK+R K+++LF+D   S    L    +I+T   D +V KE RTR+ARQLS
Sbjct: 4   PQNYEFQEWWNKQREKHHDLFID--KSETQRLFTSVEIHTPTADPAVDKE-RTRSARQLS 60


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