BLASTX nr result

ID: Coptis25_contig00025372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025372
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265598.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   247   1e-63
ref|XP_002312289.1| predicted protein [Populus trichocarpa] gi|2...   241   8e-62
ref|XP_004144165.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   240   2e-61
ref|XP_003518783.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   238   7e-61
ref|XP_002512060.1| glycine-rich RNA-binding protein, putative [...   237   2e-60

>ref|XP_002265598.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Vitis vinifera]
           gi|297743796|emb|CBI36679.3| unnamed protein product
           [Vitis vinifera]
          Length = 173

 Score =  247 bits (631), Expect = 1e-63
 Identities = 125/169 (73%), Positives = 135/169 (79%), Gaps = 1/169 (0%)
 Frame = +2

Query: 20  VQKNTLYVGGLAEEVNETILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEXXXX 199
           VQKNTLYVGGLAEEVNE+ILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE    
Sbjct: 5   VQKNTLYVGGLAEEVNESILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAAA 64

Query: 200 XXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFXXXXXXXXXXXXXXX 379
                   ELYGRVLTVNYALPE+IKGGEQGWAAQPIWADADTWF               
Sbjct: 65  AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRIQAE 124

Query: 380 NRAAMQAAEDLHRKKQAEERDGEKEDDT-NKNDPMAMAEAEVLNQKNST 523
           NRAAMQAAE+LHRKK A+ER+GEK+++   K+DPMA  EAEVLNQ NS+
Sbjct: 125 NRAAMQAAEELHRKKMAQEREGEKDEEVEGKDDPMARVEAEVLNQSNSS 173


>ref|XP_002312289.1| predicted protein [Populus trichocarpa] gi|222852109|gb|EEE89656.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  241 bits (616), Expect = 8e-62
 Identities = 124/168 (73%), Positives = 131/168 (77%), Gaps = 1/168 (0%)
 Frame = +2

Query: 20  VQKNTLYVGGLAEEVNETILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEXXXX 199
           VQKNTLYVGGLAEEVNE ILH+ FIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+E    
Sbjct: 7   VQKNTLYVGGLAEEVNEAILHATFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAAS 66

Query: 200 XXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFXXXXXXXXXXXXXXX 379
                   ELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWF               
Sbjct: 67  AMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFERQQQEEEMQRMQAE 126

Query: 380 NRAAMQAAEDLHRKKQAEERDGEKEDDTN-KNDPMAMAEAEVLNQKNS 520
           NRAAM+AAE+LHRKK AEER+GEKED+   K+DPMA AEAEVL Q  S
Sbjct: 127 NRAAMEAAEELHRKKMAEEREGEKEDEGQVKDDPMARAEAEVLKQNIS 174


>ref|XP_004144165.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cucumis
           sativus] gi|449529401|ref|XP_004171688.1| PREDICTED:
           peptidyl-prolyl cis-trans isomerase E-like [Cucumis
           sativus]
          Length = 171

 Score =  240 bits (613), Expect = 2e-61
 Identities = 122/171 (71%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
 Frame = +2

Query: 8   LPMAVQKNTLYVGGLAEEVNETILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 187
           +  AVQKNTLYVGGLAEEVNE+ILH+AFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE
Sbjct: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 60

Query: 188 XXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFXXXXXXXXXXX 367
                       ELYGRVLTVNYALPE+IKGGEQGWAAQPIWADADTWF           
Sbjct: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120

Query: 368 XXXXNRAAMQAAEDLHRKKQAEERDGEKEDDTN-KNDPMAMAEAEVLNQKN 517
               NRAAM+AAE+LHRKK A+ER+GEK+++ + K DPMA AEAEVL Q +
Sbjct: 121 LQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTKVDPMAKAEAEVLRQNS 171


>ref|XP_003518783.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Glycine max]
          Length = 172

 Score =  238 bits (608), Expect = 7e-61
 Identities = 120/171 (70%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
 Frame = +2

Query: 5   SLPMAVQKNTLYVGGLAEEVNETILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 184
           ++   VQKNTLYVGGLAEEVNE+ILH+AFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+
Sbjct: 2   AMMQGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLER 61

Query: 185 EXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFXXXXXXXXXX 364
           E            ELYGRVLTVNYALPE+IKGGEQGWAAQP+WADADTWF          
Sbjct: 62  EDASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPVWADADTWFERQQQEEEMK 121

Query: 365 XXXXXNRAAMQAAEDLHRKKQAEERDGEKEDDTN-KNDPMAMAEAEVLNQK 514
                NRAAMQAAEDLHRK+ AE+R+GEKE++   K+DPMA AEAEVL  +
Sbjct: 122 RIEAENRAAMQAAEDLHRKQVAEQREGEKEEEIEIKDDPMAKAEAEVLQNQ 172


>ref|XP_002512060.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223549240|gb|EEF50729.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 176

 Score =  237 bits (604), Expect = 2e-60
 Identities = 121/174 (69%), Positives = 131/174 (75%), Gaps = 1/174 (0%)
 Frame = +2

Query: 2   RSLPMAVQKNTLYVGGLAEEVNETILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 181
           + L   VQKNTLYVGGLA+EVNE ILH+AFIPFGDIKDVKTPLDQATQKHR+FGFVTFLE
Sbjct: 3   QQLLQQVQKNTLYVGGLADEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRAFGFVTFLE 62

Query: 182 KEXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFXXXXXXXXX 361
           KE            ELYGRVLTVNYALPEKIKGGEQGWAAQPIW DADTWF         
Sbjct: 63  KEDAAAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWKDADTWFERQRHQEEM 122

Query: 362 XXXXXXNRAAMQAAEDLHRKKQAEERDGEKEDDTN-KNDPMAMAEAEVLNQKNS 520
                 N+A MQAAE+LHRKK A+ER+GEKED+   K+DPMA AEAEV  Q  S
Sbjct: 123 ERIQAENKATMQAAEELHRKKMAQEREGEKEDEMEVKDDPMARAEAEVSKQNGS 176


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