BLASTX nr result

ID: Coptis25_contig00025363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025363
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA36615.1| unnamed protein product [Solanum tuberosum]           122   3e-26
emb|CAN75434.1| hypothetical protein VITISV_027911 [Vitis vinifera]   120   1e-25
emb|CAN80061.1| hypothetical protein VITISV_007942 [Vitis vinifera]   119   2e-25
ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...   117   1e-24
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]   114   1e-23

>emb|CAA36615.1| unnamed protein product [Solanum tuberosum]
          Length = 675

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/105 (53%), Positives = 80/105 (76%), Gaps = 3/105 (2%)
 Frame = +2

Query: 2   PTNHVPSDMD-NRPVAVCKGLR--TKHPIDRFISYKALSPKYKSFVGAMSSISIPSSVAD 172
           PT+ + + +D + P+A  KG+R  +K+PI  F+SYK LSP Y +F   +SS+ IP++V D
Sbjct: 517 PTDSISNSLDLDLPIAKRKGVRNTSKYPISMFVSYKKLSPSYSAFTSQLSSVEIPTNVQD 576

Query: 173 ALSQPQWRKAMMEEMHALEKNKTWDLVPLPKGKKLVGCKWVFTVK 307
           AL  P+W++A++EE+ ALEKN+TW+LV LP+GKK VGCKWVFT K
Sbjct: 577 ALQVPEWKEAILEELRALEKNETWELVDLPEGKKPVGCKWVFTTK 621


>emb|CAN75434.1| hypothetical protein VITISV_027911 [Vitis vinifera]
          Length = 1162

 Score =  120 bits (301), Expect = 1e-25
 Identities = 53/102 (51%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
 Frame = +2

Query: 8   NHVPSDMDNRPVAVCKGLR--TKHPIDRFISYKALSPKYKSFVGAMSSISIPSSVADALS 181
           N   +D  + P+A+ KG+R  TKHPI  F+SY+ LSPK+K+FV  + +I +P+++ +AL 
Sbjct: 537 NPETNDDSDFPIAMRKGVRSCTKHPIYTFVSYEGLSPKFKTFVANLDNIQVPNNIQEALG 596

Query: 182 QPQWRKAMMEEMHALEKNKTWDLVPLPKGKKLVGCKWVFTVK 307
            P+W+ A+ EE+HALEKN TW++  LP GK+LVGCKW+FTVK
Sbjct: 597 SPEWKSAVYEEIHALEKNGTWEISELPVGKRLVGCKWIFTVK 638


>emb|CAN80061.1| hypothetical protein VITISV_007942 [Vitis vinifera]
          Length = 960

 Score =  119 bits (299), Expect = 2e-25
 Identities = 53/102 (51%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
 Frame = +2

Query: 8   NHVPSDMDNRPVAVCKGLR--TKHPIDRFISYKALSPKYKSFVGAMSSISIPSSVADALS 181
           N   +D  + P+AV KG+R  TKHPI  F+SY+ LSPK+K+FV  + +I +P+++ +ALS
Sbjct: 421 NXETNDDSDFPIAVRKGVRSCTKHPIHTFVSYEGLSPKFKTFVANLDNIQVPNNIKEALS 480

Query: 182 QPQWRKAMMEEMHALEKNKTWDLVPLPKGKKLVGCKWVFTVK 307
            P+W+  + EE+HALEKN TW++  LP GK+ VGCKW+FTVK
Sbjct: 481 SPEWKSIVYEEIHALEKNGTWEISELPVGKRPVGCKWIFTVK 522


>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/101 (55%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
 Frame = +2

Query: 17   PSDMDNR-PVAVCKGLRTK---HPIDRFISYKALSPKYKSFVGAMSSISIPSSVADALSQ 184
            PS  D+  P+A+ KG R+    HPI  F+SY  LSP Y SFV ++SS+++PS+V +AL  
Sbjct: 954  PSHSDSHWPIAIRKGTRSTRNPHPIYNFLSYHRLSPSYSSFVFSLSSLTVPSTVREALDH 1013

Query: 185  PQWRKAMMEEMHALEKNKTWDLVPLPKGKKLVGCKWVFTVK 307
            P WR+AM++EM ALE N TW+LVPLP GK  VGC+WV+TVK
Sbjct: 1014 PGWRQAMVDEMQALENNGTWELVPLPPGKTTVGCRWVYTVK 1054


>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 2/94 (2%)
 Frame = +2

Query: 32   NRPVAVCKGLR--TKHPIDRFISYKALSPKYKSFVGAMSSISIPSSVADALSQPQWRKAM 205
            N P+A  KG+R  TKHP+  ++SYK LSP + +F   +S + IP +V +AL  P+W+KA+
Sbjct: 952  NIPIATRKGVRSCTKHPMSNYMSYKNLSPSFFAFTSHLSLVEIPKNVQEALQVPEWKKAI 1011

Query: 206  MEEMHALEKNKTWDLVPLPKGKKLVGCKWVFTVK 307
             EEM ALEKN TW+++ LPKGK  VGCKWVFTVK
Sbjct: 1012 FEEMRALEKNHTWEVMGLPKGKTTVGCKWVFTVK 1045


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