BLASTX nr result
ID: Coptis25_contig00025351
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025351 (233 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 61 8e-08 emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 60 2e-07 gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 60 2e-07 gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 60 2e-07 dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ... 59 3e-07 >dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1223 Score = 61.2 bits (147), Expect = 8e-08 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Frame = +3 Query: 12 NHATNLKHIWHIVSGKETLWVNCVNKKLIKNRNFWHLK-VPNDYSWVWRNILHDRKFASP 188 N LK +W IVS +LWV V++ L++N +FW +K + SW+W+ +L R+ A Sbjct: 883 NDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKT 942 Query: 189 IALHQI*NGDNTKFW 233 ++ ++ NG T FW Sbjct: 943 LSKVEVGNGKQTSFW 957 >emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1389 Score = 60.1 bits (144), Expect = 2e-07 Identities = 26/76 (34%), Positives = 42/76 (55%) Frame = +3 Query: 6 ILNHATNLKHIWHIVSGKETLWVNCVNKKLIKNRNFWHLKVPNDYSWVWRNILHDRKFAS 185 + N A +K +W I+ K+ +WV V +K +K +N K+P++ SW W+N+L R F S Sbjct: 876 VTNIALQMKLLWKIMVSKDNIWVKLVTQKYLKEQNLLVCKIPSNASWQWKNLLRHRNFFS 935 Query: 186 PIALHQI*NGDNTKFW 233 I +G + FW Sbjct: 936 KGLRWLIGDGQDISFW 951 >gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1216 Score = 60.1 bits (144), Expect = 2e-07 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Frame = +3 Query: 12 NHATNLKHIWHIVSGKETLWVNCVNKKLIKNRNFWHLKVPNDY-SWVWRNILHDRKFASP 188 N ++LK IW ++S +++LWV L+K +FW + + SW+WR +L R+ A Sbjct: 604 NKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKS 663 Query: 189 IALHQI*NGDNTKFW 233 ++ NG NT FW Sbjct: 664 FCKIEVNNGVNTSFW 678 >gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1352 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Frame = +3 Query: 12 NHATNLKHIWHIVSGKETLWVNCVNKKLIKNRNFWHLKVPNDY-SWVWRNILHDRKFASP 188 N + LK IW I+S +++LWV VNK LI+ FW +K SW+WR IL R A Sbjct: 1030 NEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWLWRKILKQRDKARL 1089 Query: 189 IALHQI*NGDNTKFW 233 ++ +G T FW Sbjct: 1090 FHRMEVRSGTFTSFW 1104 >dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1115 Score = 59.3 bits (142), Expect = 3e-07 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 2/76 (2%) Frame = +3 Query: 12 NHATNLKHIWHIVSGKETLWVNCVNKKLIKNRNFWHLKVPNDY--SWVWRNILHDRKFAS 185 N + LK IW + S ++LWV L+K +FW LK PN SW+W+ +L R+ A Sbjct: 799 NVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLK-PNSSLGSWMWKKMLKYRETAK 857 Query: 186 PIALHQI*NGDNTKFW 233 P + ++ NG T FW Sbjct: 858 PFSRVEVNNGARTSFW 873