BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025325
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-...    57   4e-14
emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera]    57   7e-14
ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-...    56   1e-13
ref|XP_002271430.1| PREDICTED: Werner Syndrome-like exonuclease-...    42   2e-08
tpg|DAA58261.1| TPA: 3-5 exonuclease/ nucleic acid binding prote...    47   3e-07

>ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
          Length = 208

 Score = 57.4 bits (137), Expect(2) = 4e-14
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = -1

Query: 485 PLMPKEFLNDSNISFVGVGLKADVTKLRKQYTLDFSCIQDITDLVKNSTWSSLLKSPGNQ 306
           P   K FL DSN +FVGV + AD+ KL+ +Y L+ SC  D+  ++    W    + PG  
Sbjct: 96  PQSLKGFLLDSNFTFVGVEVGADIDKLKNEYGLECSCSADVR-ILAMQRWPGRFRRPG-- 152

Query: 305 TSMKELASKILDLSVKKPK 249
             +K+LA ++++L +KKPK
Sbjct: 153 --LKDLAWEVVNLRMKKPK 169



 Score = 45.1 bits (105), Expect(2) = 4e-14
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = -3

Query: 249 NWETRVLREDQIKYAYVDAYISYQMGFKL 163
           NWE RVL E+Q++YA +DAY SY++G KL
Sbjct: 175 NWEARVLNENQVEYACIDAYASYRIGHKL 203


>emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera]
          Length = 219

 Score = 57.4 bits (137), Expect(2) = 7e-14
 Identities = 31/79 (39%), Positives = 48/79 (60%)
 Frame = -1

Query: 485 PLMPKEFLNDSNISFVGVGLKADVTKLRKQYTLDFSCIQDITDLVKNSTWSSLLKSPGNQ 306
           P   K FL DSN +FVGV + AD+ KL+ +Y L+ SC  D+  ++    W    + PG  
Sbjct: 107 PQSLKGFLLDSNFTFVGVEVGADIDKLKNEYGLECSCSADVR-ILAMQRWPGRFRRPG-- 163

Query: 305 TSMKELASKILDLSVKKPK 249
             +K+LA ++++L +KKPK
Sbjct: 164 --LKDLAWEVVNLRMKKPK 180



 Score = 44.3 bits (103), Expect(2) = 7e-14
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = -3

Query: 249 NWETRVLREDQIKYAYVDAYISYQMGFKL 163
           NWE RVL E+Q+ YA +DAY SY++G KL
Sbjct: 186 NWEARVLNENQVDYACIDAYASYRIGHKL 214


>ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
          Length = 210

 Score = 55.8 bits (133), Expect(2) = 1e-13
 Identities = 31/75 (41%), Positives = 44/75 (58%)
 Frame = -1

Query: 473 KEFLNDSNISFVGVGLKADVTKLRKQYTLDFSCIQDITDLVKNSTWSSLLKSPGNQTSMK 294
           K FL DSN +FVG+ +  D+ KL+ +Y LD S   DI DL     W    + PG    +K
Sbjct: 103 KSFLADSNFTFVGIEVGDDIAKLKNEYGLDCSRSADIRDLAM-QRWPGRFRRPG----LK 157

Query: 293 ELASKILDLSVKKPK 249
           +LA ++ +L +KKPK
Sbjct: 158 DLAWEVTNLPMKKPK 172



 Score = 45.1 bits (105), Expect(2) = 1e-13
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = -3

Query: 249 NWETRVLREDQIKYAYVDAYISYQMGFKL 163
           NWE RVL E+QI+YA +DAY SY++G KL
Sbjct: 178 NWEARVLSENQIEYACIDAYASYKIGHKL 206


>ref|XP_002271430.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
          Length = 196

 Score = 42.0 bits (97), Expect(2) = 2e-08
 Identities = 15/31 (48%), Positives = 24/31 (77%)
 Frame = -3

Query: 255 AQNWETRVLREDQIKYAYVDAYISYQMGFKL 163
           + NWE R+L  +Q++YA +DAY SY++G +L
Sbjct: 162 SSNWEARILSNEQVEYASIDAYASYRIGHRL 192



 Score = 41.6 bits (96), Expect(2) = 2e-08
 Identities = 25/74 (33%), Positives = 43/74 (58%)
 Frame = -1

Query: 473 KEFLNDSNISFVGVGLKADVTKLRKQYTLDFSCIQDITDLVKNSTWSSLLKSPGNQTSMK 294
           K FL++  ++FVGV +++D  KLR +Y LD     +I  L  +   +   + PG    +K
Sbjct: 88  KNFLSNPAVTFVGVEVESDAMKLRDEYELDCQETSNIRALACSFWPNRWYRRPG----LK 143

Query: 293 ELASKILDLSVKKP 252
           +LA +I+ L ++KP
Sbjct: 144 DLAFQIVGLLMQKP 157


>tpg|DAA58261.1| TPA: 3-5 exonuclease/ nucleic acid binding protein [Zea mays]
          Length = 200

 Score = 46.6 bits (109), Expect(2) = 3e-07
 Identities = 24/74 (32%), Positives = 43/74 (58%)
 Frame = -1

Query: 470 EFLNDSNISFVGVGLKADVTKLRKQYTLDFSCIQDITDLVKNSTWSSLLKSPGNQTSMKE 291
           EFL+D + +FVGVG+ ADV +L   Y L+ +  +D+ +L         L++ G    ++ 
Sbjct: 92  EFLSDPDYTFVGVGVAADVERLENDYDLEVANAEDLAELAAKEMGHPDLRNAG----LQG 147

Query: 290 LASKILDLSVKKPK 249
           +A  ++D  V+KP+
Sbjct: 148 IARVVMDAHVEKPQ 161



 Score = 32.7 bits (73), Expect(2) = 3e-07
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = -3

Query: 246 WETRVLREDQIKYAYVDAYISYQMGFKLRS 157
           W+   L ++QI+YA +DA++S+++G  L S
Sbjct: 168 WDASSLSDEQIEYATIDAFVSFEVGRMLLS 197