BLASTX nr result
ID: Coptis25_contig00025325
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025325 (485 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-... 57 4e-14 emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera] 57 7e-14 ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-... 56 1e-13 ref|XP_002271430.1| PREDICTED: Werner Syndrome-like exonuclease-... 42 2e-08 tpg|DAA58261.1| TPA: 3-5 exonuclease/ nucleic acid binding prote... 47 3e-07 >ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera] Length = 208 Score = 57.4 bits (137), Expect(2) = 4e-14 Identities = 31/79 (39%), Positives = 48/79 (60%) Frame = -1 Query: 485 PLMPKEFLNDSNISFVGVGLKADVTKLRKQYTLDFSCIQDITDLVKNSTWSSLLKSPGNQ 306 P K FL DSN +FVGV + AD+ KL+ +Y L+ SC D+ ++ W + PG Sbjct: 96 PQSLKGFLLDSNFTFVGVEVGADIDKLKNEYGLECSCSADVR-ILAMQRWPGRFRRPG-- 152 Query: 305 TSMKELASKILDLSVKKPK 249 +K+LA ++++L +KKPK Sbjct: 153 --LKDLAWEVVNLRMKKPK 169 Score = 45.1 bits (105), Expect(2) = 4e-14 Identities = 18/29 (62%), Positives = 24/29 (82%) Frame = -3 Query: 249 NWETRVLREDQIKYAYVDAYISYQMGFKL 163 NWE RVL E+Q++YA +DAY SY++G KL Sbjct: 175 NWEARVLNENQVEYACIDAYASYRIGHKL 203 >emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera] Length = 219 Score = 57.4 bits (137), Expect(2) = 7e-14 Identities = 31/79 (39%), Positives = 48/79 (60%) Frame = -1 Query: 485 PLMPKEFLNDSNISFVGVGLKADVTKLRKQYTLDFSCIQDITDLVKNSTWSSLLKSPGNQ 306 P K FL DSN +FVGV + AD+ KL+ +Y L+ SC D+ ++ W + PG Sbjct: 107 PQSLKGFLLDSNFTFVGVEVGADIDKLKNEYGLECSCSADVR-ILAMQRWPGRFRRPG-- 163 Query: 305 TSMKELASKILDLSVKKPK 249 +K+LA ++++L +KKPK Sbjct: 164 --LKDLAWEVVNLRMKKPK 180 Score = 44.3 bits (103), Expect(2) = 7e-14 Identities = 18/29 (62%), Positives = 23/29 (79%) Frame = -3 Query: 249 NWETRVLREDQIKYAYVDAYISYQMGFKL 163 NWE RVL E+Q+ YA +DAY SY++G KL Sbjct: 186 NWEARVLNENQVDYACIDAYASYRIGHKL 214 >ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera] Length = 210 Score = 55.8 bits (133), Expect(2) = 1e-13 Identities = 31/75 (41%), Positives = 44/75 (58%) Frame = -1 Query: 473 KEFLNDSNISFVGVGLKADVTKLRKQYTLDFSCIQDITDLVKNSTWSSLLKSPGNQTSMK 294 K FL DSN +FVG+ + D+ KL+ +Y LD S DI DL W + PG +K Sbjct: 103 KSFLADSNFTFVGIEVGDDIAKLKNEYGLDCSRSADIRDLAM-QRWPGRFRRPG----LK 157 Query: 293 ELASKILDLSVKKPK 249 +LA ++ +L +KKPK Sbjct: 158 DLAWEVTNLPMKKPK 172 Score = 45.1 bits (105), Expect(2) = 1e-13 Identities = 19/29 (65%), Positives = 24/29 (82%) Frame = -3 Query: 249 NWETRVLREDQIKYAYVDAYISYQMGFKL 163 NWE RVL E+QI+YA +DAY SY++G KL Sbjct: 178 NWEARVLSENQIEYACIDAYASYKIGHKL 206 >ref|XP_002271430.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera] Length = 196 Score = 42.0 bits (97), Expect(2) = 2e-08 Identities = 15/31 (48%), Positives = 24/31 (77%) Frame = -3 Query: 255 AQNWETRVLREDQIKYAYVDAYISYQMGFKL 163 + NWE R+L +Q++YA +DAY SY++G +L Sbjct: 162 SSNWEARILSNEQVEYASIDAYASYRIGHRL 192 Score = 41.6 bits (96), Expect(2) = 2e-08 Identities = 25/74 (33%), Positives = 43/74 (58%) Frame = -1 Query: 473 KEFLNDSNISFVGVGLKADVTKLRKQYTLDFSCIQDITDLVKNSTWSSLLKSPGNQTSMK 294 K FL++ ++FVGV +++D KLR +Y LD +I L + + + PG +K Sbjct: 88 KNFLSNPAVTFVGVEVESDAMKLRDEYELDCQETSNIRALACSFWPNRWYRRPG----LK 143 Query: 293 ELASKILDLSVKKP 252 +LA +I+ L ++KP Sbjct: 144 DLAFQIVGLLMQKP 157 >tpg|DAA58261.1| TPA: 3-5 exonuclease/ nucleic acid binding protein [Zea mays] Length = 200 Score = 46.6 bits (109), Expect(2) = 3e-07 Identities = 24/74 (32%), Positives = 43/74 (58%) Frame = -1 Query: 470 EFLNDSNISFVGVGLKADVTKLRKQYTLDFSCIQDITDLVKNSTWSSLLKSPGNQTSMKE 291 EFL+D + +FVGVG+ ADV +L Y L+ + +D+ +L L++ G ++ Sbjct: 92 EFLSDPDYTFVGVGVAADVERLENDYDLEVANAEDLAELAAKEMGHPDLRNAG----LQG 147 Query: 290 LASKILDLSVKKPK 249 +A ++D V+KP+ Sbjct: 148 IARVVMDAHVEKPQ 161 Score = 32.7 bits (73), Expect(2) = 3e-07 Identities = 12/30 (40%), Positives = 22/30 (73%) Frame = -3 Query: 246 WETRVLREDQIKYAYVDAYISYQMGFKLRS 157 W+ L ++QI+YA +DA++S+++G L S Sbjct: 168 WDASSLSDEQIEYATIDAFVSFEVGRMLLS 197