BLASTX nr result
ID: Coptis25_contig00025321
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025321 (499 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI36340.3| unnamed protein product [Vitis vinifera] 202 2e-50 ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi... 202 2e-50 ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containi... 184 5e-45 ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|2... 179 3e-43 ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containi... 177 1e-42 >emb|CBI36340.3| unnamed protein product [Vitis vinifera] Length = 630 Score = 202 bits (514), Expect = 2e-50 Identities = 102/156 (65%), Positives = 123/156 (78%) Frame = +2 Query: 32 IKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDEM 211 I+LLK SADTKNLK G+ IHAHL+I+ T+ NI+Q NSLI+LY KC+Q+ +AR LFD M Sbjct: 260 IQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM 319 Query: 212 PERNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIMAVKEG 391 +RNVVSW +LMAGYFH+G LEVLRLFK M + + PNEYIFAT++SSCS V EG Sbjct: 320 RKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEG 379 Query: 392 MQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGAL 499 QCHGY LKSGLVFH YVKNALI MY+R D++GA+ Sbjct: 380 WQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAM 415 Score = 67.4 bits (163), Expect = 1e-09 Identities = 37/107 (34%), Positives = 62/107 (57%) Frame = +2 Query: 62 KNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDEMPERNVVSWSS 241 K+L+LG +H + + + + ++++I +Y KC + ARK+F+ + +NVVSW++ Sbjct: 443 KDLRLGLQVHCRMFRT--GAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTA 500 Query: 242 LMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIMAV 382 ++A Y +G E L F M PNEY FA +L+SC+ I AV Sbjct: 501 ILAAYSQNGCFEEALNFFPEM-EVDGLLPNEYTFAVLLNSCADIAAV 546 >ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39680-like [Vitis vinifera] Length = 703 Score = 202 bits (514), Expect = 2e-50 Identities = 102/156 (65%), Positives = 123/156 (78%) Frame = +2 Query: 32 IKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDEM 211 I+LLK SADTKNLK G+ IHAHL+I+ T+ NI+Q NSLI+LY KC+Q+ +AR LFD M Sbjct: 29 IQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM 88 Query: 212 PERNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIMAVKEG 391 +RNVVSW +LMAGYFH+G LEVLRLFK M + + PNEYIFAT++SSCS V EG Sbjct: 89 RKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEG 148 Query: 392 MQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGAL 499 QCHGY LKSGLVFH YVKNALI MY+R D++GA+ Sbjct: 149 WQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAM 184 Score = 90.5 bits (223), Expect = 1e-16 Identities = 51/145 (35%), Positives = 82/145 (56%) Frame = +2 Query: 62 KNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDEMPERNVVSWSS 241 K+L+LG +H + + + + ++++I +Y KC + ARK+F+ + +NVVSW++ Sbjct: 244 KDLRLGLQVHCRMFRT--GAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTA 301 Query: 242 LMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIMAVKEGMQCHGYVLKS 421 ++A Y +G E L F M PNEY FA +L+SC+ I A+ G H + KS Sbjct: 302 ILAAYSQNGCFEEALNFFPEMEVDGLL-PNEYTFAVLLNSCAGISALGHGKLLHTRIKKS 360 Query: 422 GLVFHSYVKNALIHMYTRCLDMEGA 496 G H V NALI+MY++ +E A Sbjct: 361 GFEDHIIVGNALINMYSKSGSIEAA 385 Score = 57.8 bits (138), Expect = 9e-07 Identities = 40/127 (31%), Positives = 65/127 (51%) Frame = +2 Query: 38 LLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDEMPE 217 LL A L G+ +H I + +II N+LI++Y K + A K+F EM Sbjct: 337 LLNSCAGISALGHGKLLHTR--IKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMIC 394 Query: 218 RNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIMAVKEGMQ 397 R+ ++WS+++ G H G E L +F+ M CP+ F VLS+C+ + +V+EG Sbjct: 395 RDSITWSAMICGLSHHGLGREALVVFQEMLA-AKECPHYVTFVGVLSACAHLGSVQEGFY 453 Query: 398 CHGYVLK 418 ++K Sbjct: 454 YLNQLMK 460 >ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39680-like [Cucumis sativus] Length = 697 Score = 184 bits (468), Expect = 5e-45 Identities = 96/161 (59%), Positives = 116/161 (72%), Gaps = 1/161 (0%) Frame = +2 Query: 20 HTLVIKLLKFSADTKNLKLGQTIHAHLLISTPNTQ-LNIIQTNSLIHLYVKCNQLSLARK 196 H IKLLK +AD KNLK G+TIHAHL I+ N + + Q NSLI+LYVKC+++S+ARK Sbjct: 19 HQDPIKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARK 78 Query: 197 LFDEMPERNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIM 376 LFD MP RNVVSWS+LMAGY +G LEV LFK M PNEY+ AT +SSC + M Sbjct: 79 LFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQM 138 Query: 377 AVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGAL 499 V EG QCHGY LKSGL FH YVKNALI +Y++C D+ A+ Sbjct: 139 YV-EGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAI 178 Score = 89.7 bits (221), Expect = 2e-16 Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 2/163 (1%) Frame = +2 Query: 14 YNHTLVIKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLAR 193 +N+ + + + A K++ LG+ +HA +L S + + I +S+I +Y KC + R Sbjct: 222 WNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYI--GSSIIDMYGKCGNVLSGR 279 Query: 194 KLFDEMPERNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFC--PNEYIFATVLSSCS 367 FD + RNVVSW+S++A YF + E L LF M C PNEY A + +S + Sbjct: 280 TFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKME---IDCIPPNEYTMAVLFNSAA 336 Query: 368 AIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGA 496 + A+ G Q H KSGL + V NALI MY + D+ A Sbjct: 337 GLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAA 379 Score = 55.1 bits (131), Expect = 6e-06 Identities = 37/137 (27%), Positives = 67/137 (48%) Frame = +2 Query: 8 PSYNHTLVIKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSL 187 P +T+ + L +A L LG +HA S + N++ N+LI +Y K + Sbjct: 322 PPNEYTMAV-LFNSAAGLSALCLGDQLHARAEKS--GLKGNVMVGNALIIMYFKSGDILA 378 Query: 188 ARKLFDEMPERNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCS 367 A+ +F M N+++W++++ G+ H G E L +F+ M PN F V+ +C+ Sbjct: 379 AQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMA-TGERPNYVTFIGVILACA 437 Query: 368 AIMAVKEGMQCHGYVLK 418 + V EG +++K Sbjct: 438 HLKLVDEGFYYFNHLMK 454 >ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa] Length = 707 Score = 179 bits (453), Expect = 3e-43 Identities = 87/157 (55%), Positives = 118/157 (75%) Frame = +2 Query: 29 VIKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDE 208 +IKLLK SADTKNLK+G+TIH+HL++++ T+ +II+ NSLI+ Y K NQ+S+A LFD Sbjct: 32 LIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDR 91 Query: 209 MPERNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIMAVKE 388 MPERNVVSWS+LM GY +G SL+V+RL K M + PNEYI A +SSC V+E Sbjct: 92 MPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEE 151 Query: 389 GMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGAL 499 G QCHG +LK+G FH+YV+NAL+ MY++C ++ A+ Sbjct: 152 GRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAM 188 Score = 95.1 bits (235), Expect = 5e-18 Identities = 53/155 (34%), Positives = 87/155 (56%) Frame = +2 Query: 32 IKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDEM 211 + A K+L+LG +H +L T + + + ++++I++Y KC + +AR +FD + Sbjct: 238 VNAFSLCASLKDLRLGLHVHGKML--TSDVECDAYVSSAIINMYGKCGKSLMARGVFDGL 295 Query: 212 PERNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIMAVKEG 391 RNVV W+++MA F +G E L LF M NE+ +A +L++C+ + A + G Sbjct: 296 QSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQ-ENVKSNEFTYAVLLNACAGLSARRNG 354 Query: 392 MQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGA 496 HG+ KSG H V NALI+MY + D+E A Sbjct: 355 SLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAA 389 Score = 62.0 bits (149), Expect = 5e-08 Identities = 44/162 (27%), Positives = 86/162 (53%), Gaps = 6/162 (3%) Frame = +2 Query: 11 SYNHTLVIKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLA 190 S N ++ + D ++ G+ H LL+ T + N ++ N+L+ +Y KC+ + A Sbjct: 130 SPNEYILAIAISSCCDRGRVEEGRQCHG-LLLKTGFSFHNYVR-NALVSMYSKCSIVQDA 187 Query: 191 RKLFDEMPERNVVSWSSLMA-----GYFHSGGSLEVLRLFKCMS-NWVFFCPNEYIFATV 352 +++E+P ++V+++S+++ GY G LEVLR S W ++ F Sbjct: 188 MGVWNEVPVNDIVAYNSILSSLVENGYLREG--LEVLRSMVSESVKW-----DKVTFVNA 240 Query: 353 LSSCSAIMAVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRC 478 S C+++ ++ G+ HG +L S + +YV +A+I+MY +C Sbjct: 241 FSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKC 282 Score = 57.8 bits (138), Expect = 9e-07 Identities = 35/127 (27%), Positives = 66/127 (51%) Frame = +2 Query: 38 LLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDEMPE 217 LL A + G +H H S + +++ N+LI++Y K + A+K+F +M Sbjct: 341 LLNACAGLSARRNGSLLHGHSEKS--GFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMH 398 Query: 218 RNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIMAVKEGMQ 397 R++++W++++ G+ H G + L +F+ M PN F VLS+C + V+EG Sbjct: 399 RDIITWNAMICGFSHHGLGKKALLVFQDMLA-AEEHPNYVTFTGVLSACGHLGLVQEGFY 457 Query: 398 CHGYVLK 418 +++K Sbjct: 458 YLHHLMK 464 >ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39680-like [Glycine max] Length = 703 Score = 177 bits (448), Expect = 1e-42 Identities = 90/158 (56%), Positives = 112/158 (70%), Gaps = 1/158 (0%) Frame = +2 Query: 29 VIKLLKFSADTKNLKLGQTIHAHLLISTPNTQ-LNIIQTNSLIHLYVKCNQLSLARKLFD 205 V+ LLKFSA K+L+ G+TIHA L++ ++ +I Q NSLI+LY KC Q ARKLFD Sbjct: 26 VVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFD 85 Query: 206 EMPERNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIMAVK 385 M +RNVVSWS+LM GY H G LEVL LF+ + + PNEYIF VLS C+ VK Sbjct: 86 RMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVK 145 Query: 386 EGMQCHGYVLKSGLVFHSYVKNALIHMYTRCLDMEGAL 499 EG QCHGY+LKSGL+ H YVKNALIHMY+RC ++ A+ Sbjct: 146 EGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAM 183 Score = 94.4 bits (233), Expect = 9e-18 Identities = 53/148 (35%), Positives = 88/148 (59%) Frame = +2 Query: 32 IKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDEM 211 + +L A ++L+LG IHA LL + ++ +++LI Y KC ++ ARK FD + Sbjct: 233 VSVLGLCAQIRDLQLGLQIHAQLLKT--GLVFDVFVSSTLIDTYGKCGEVLNARKQFDGL 290 Query: 212 PERNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIMAVKEG 391 +RNVV+W++++ Y +G E L LF M PNE+ FA +L++C++++A+ G Sbjct: 291 RDRNVVAWTAVLTAYLQNGHFEETLNLFTKM-ELEDTRPNEFTFAVLLNACASLVALAYG 349 Query: 392 MQCHGYVLKSGLVFHSYVKNALIHMYTR 475 HG ++ SG H V NALI+MY++ Sbjct: 350 DLLHGRIVMSGFKNHLIVGNALINMYSK 377 Score = 74.3 bits (181), Expect = 9e-12 Identities = 46/154 (29%), Positives = 81/154 (52%) Frame = +2 Query: 17 NHTLVIKLLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARK 196 N + +L AD+ +K G+ H +LL S L+ N+LIH+Y +C + A + Sbjct: 127 NEYIFTIVLSCCADSGRVKEGKQCHGYLLKS--GLLLHQYVKNALIHMYSRCFHVDSAMQ 184 Query: 197 LFDEMPERNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIM 376 + D +P +V S++S+++ SG E ++ K M + + + +VL C+ I Sbjct: 185 ILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIW-DSVTYVSVLGLCAQIR 243 Query: 377 AVKEGMQCHGYVLKSGLVFHSYVKNALIHMYTRC 478 ++ G+Q H +LK+GLVF +V + LI Y +C Sbjct: 244 DLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKC 277 Score = 63.9 bits (154), Expect = 1e-08 Identities = 37/127 (29%), Positives = 66/127 (51%) Frame = +2 Query: 38 LLKFSADTKNLKLGQTIHAHLLISTPNTQLNIIQTNSLIHLYVKCNQLSLARKLFDEMPE 217 LL A L G +H +++S + ++I N+LI++Y K + + +F M Sbjct: 336 LLNACASLVALAYGDLLHGRIVMS--GFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMN 393 Query: 218 RNVVSWSSLMAGYFHSGGSLEVLRLFKCMSNWVFFCPNEYIFATVLSSCSAIMAVKEGMQ 397 R+V++W++++ GY H G + L +F+ M + CPN F VLS+C + V+EG Sbjct: 394 RDVITWNAMICGYSHHGLGKQALLVFQDMMS-AGECPNYVTFIGVLSACVHLALVQEGFY 452 Query: 398 CHGYVLK 418 ++K Sbjct: 453 YFDQIMK 459