BLASTX nr result

ID: Coptis25_contig00025312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025312
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283611.1| PREDICTED: uncharacterized protein LOC100250...   293   2e-77
ref|XP_002317443.1| predicted protein [Populus trichocarpa] gi|2...   291   1e-76
gb|AFK41428.1| unknown [Medicago truncatula]                          288   1e-75
ref|XP_003543193.1| PREDICTED: uncharacterized protein LOC100794...   281   9e-74
ref|XP_003540507.1| PREDICTED: uncharacterized protein LOC100817...   281   9e-74

>ref|XP_002283611.1| PREDICTED: uncharacterized protein LOC100250342 [Vitis vinifera]
           gi|302142825|emb|CBI20120.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score =  293 bits (751), Expect = 2e-77
 Identities = 126/176 (71%), Positives = 145/176 (82%)
 Frame = +3

Query: 3   GNAWRGIDTLVFNTWHWWNRRGTTQPWDYIEEGTKIYKDMNRVVAFEKALITWAKWVDTN 182
           G  W+ ID L+FNTWHWWNRRG  QPWDYI+ G KI+KDM+R++AFE+AL TWA WVD N
Sbjct: 173 GKLWKNIDMLIFNTWHWWNRRGPMQPWDYIQSGKKIFKDMDRMIAFEEALTTWANWVDLN 232

Query: 183 VDPTKTKVFFQGISPSHYNGSEWDEPNIKNCLIEKQPVKGSTYPGGSPPALAVLKNVLRT 362
           +DPTK+KVFFQG+SPSHYNG+ W EP  KNC+ EK+P+  STYPGG PPAL V K VL  
Sbjct: 233 IDPTKSKVFFQGVSPSHYNGTSWGEPGAKNCIHEKEPLLVSTYPGGLPPALGVQKGVLSK 292

Query: 363 VSKPVYLLDVTTLSQLRKDGHPSIYGLGGQRGMDCSHWCLAGVPDTWNQILYNALL 530
           + KPV LLDVT LS LRKDGHPS+YGLGG  GMDCSHWCLAGVPDTWN+ILYN +L
Sbjct: 293 MKKPVVLLDVTNLSLLRKDGHPSMYGLGGPTGMDCSHWCLAGVPDTWNEILYNLIL 348


>ref|XP_002317443.1| predicted protein [Populus trichocarpa] gi|222860508|gb|EEE98055.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  291 bits (744), Expect = 1e-76
 Identities = 127/173 (73%), Positives = 145/173 (83%)
 Frame = +3

Query: 12  WRGIDTLVFNTWHWWNRRGTTQPWDYIEEGTKIYKDMNRVVAFEKALITWAKWVDTNVDP 191
           W GID L+FNTWHWWNRRG TQPWDYI+ G +I KDM+R++AFE AL TWAKWVD+NVDP
Sbjct: 179 WNGIDMLIFNTWHWWNRRGPTQPWDYIQVGNEIKKDMDRMLAFETALTTWAKWVDSNVDP 238

Query: 192 TKTKVFFQGISPSHYNGSEWDEPNIKNCLIEKQPVKGSTYPGGSPPALAVLKNVLRTVSK 371
            KT VFFQGISPSHYNG+ WDEP+ K+C  +KQPV GSTYPGG PP + VLK VL  ++K
Sbjct: 239 AKTLVFFQGISPSHYNGTLWDEPSAKSCAGQKQPVAGSTYPGGLPPPVEVLKGVLSKITK 298

Query: 372 PVYLLDVTTLSQLRKDGHPSIYGLGGQRGMDCSHWCLAGVPDTWNQILYNALL 530
           PV LLDVT LS LRKDGHPSIYGLGG  G+DCSHWCL GVPDTWN+ILYN ++
Sbjct: 299 PVTLLDVTLLSLLRKDGHPSIYGLGGSTGLDCSHWCLPGVPDTWNEILYNLII 351


>gb|AFK41428.1| unknown [Medicago truncatula]
          Length = 353

 Score =  288 bits (736), Expect = 1e-75
 Identities = 123/172 (71%), Positives = 145/172 (84%)
 Frame = +3

Query: 12  WRGIDTLVFNTWHWWNRRGTTQPWDYIEEGTKIYKDMNRVVAFEKALITWAKWVDTNVDP 191
           W+GID L+FNTWHWW RRG TQPWDYI+ G ++ KDM+R+ AFE+AL TWA+WVD N+DP
Sbjct: 182 WKGIDMLIFNTWHWWYRRGPTQPWDYIQVGNQVLKDMDRMKAFERALTTWARWVDANIDP 241

Query: 192 TKTKVFFQGISPSHYNGSEWDEPNIKNCLIEKQPVKGSTYPGGSPPALAVLKNVLRTVSK 371
            K KVFFQGISPSHYNG+ W+EP+ K+C+ EK P+ GSTYPGG  PA+ VLK VL T+ K
Sbjct: 242 AKVKVFFQGISPSHYNGTLWNEPSAKSCIREKTPLTGSTYPGGLQPAVGVLKGVLSTIKK 301

Query: 372 PVYLLDVTTLSQLRKDGHPSIYGLGGQRGMDCSHWCLAGVPDTWNQILYNAL 527
           PV LLD+TTLS LRKDGHPSIYGL G +GMDCSHWCL+GVPDTWNQILYN +
Sbjct: 302 PVTLLDITTLSLLRKDGHPSIYGLFGSKGMDCSHWCLSGVPDTWNQILYNLI 353


>ref|XP_003543193.1| PREDICTED: uncharacterized protein LOC100794317 [Glycine max]
          Length = 344

 Score =  281 bits (719), Expect = 9e-74
 Identities = 123/174 (70%), Positives = 141/174 (81%)
 Frame = +3

Query: 6   NAWRGIDTLVFNTWHWWNRRGTTQPWDYIEEGTKIYKDMNRVVAFEKALITWAKWVDTNV 185
           N W G D L+FNTWHWW RRG TQPWD++E G  IYKD++R+ AFE AL TW  WVD NV
Sbjct: 171 NLWEGTDMLIFNTWHWWYRRGPTQPWDFVELGGHIYKDIDRMRAFEMALKTWGAWVDANV 230

Query: 186 DPTKTKVFFQGISPSHYNGSEWDEPNIKNCLIEKQPVKGSTYPGGSPPALAVLKNVLRTV 365
           DPT+ KVFFQGISPSHYNGS W+EP + +C+ +K PV GS YPGG PPA+AVLK+VL T+
Sbjct: 231 DPTRVKVFFQGISPSHYNGSLWNEPGVTSCVRQKTPVPGSIYPGGLPPAVAVLKSVLSTI 290

Query: 366 SKPVYLLDVTTLSQLRKDGHPSIYGLGGQRGMDCSHWCLAGVPDTWNQILYNAL 527
            KPV LLD+TTLS LRKDGHPSIYGL G  GMDCSHWCL GVPDTWN+ILYN +
Sbjct: 291 RKPVTLLDITTLSLLRKDGHPSIYGLTGAAGMDCSHWCLPGVPDTWNEILYNLI 344


>ref|XP_003540507.1| PREDICTED: uncharacterized protein LOC100817531 [Glycine max]
          Length = 358

 Score =  281 bits (719), Expect = 9e-74
 Identities = 123/172 (71%), Positives = 142/172 (82%)
 Frame = +3

Query: 12  WRGIDTLVFNTWHWWNRRGTTQPWDYIEEGTKIYKDMNRVVAFEKALITWAKWVDTNVDP 191
           W+GID L+FNTWHWW RRG TQPWD++E G   YKD++R+ AFE AL TW  WVD NVDP
Sbjct: 187 WQGIDMLIFNTWHWWYRRGPTQPWDFVELGGHTYKDIDRMRAFEIALKTWGAWVDANVDP 246

Query: 192 TKTKVFFQGISPSHYNGSEWDEPNIKNCLIEKQPVKGSTYPGGSPPALAVLKNVLRTVSK 371
           T+ KVFFQGISPSHYNGS W+EP+  +C+ +K PV GSTYPGG PPA+AVLK+VL T+ K
Sbjct: 247 TRVKVFFQGISPSHYNGSLWNEPSATSCIRQKTPVPGSTYPGGLPPAVAVLKSVLSTIRK 306

Query: 372 PVYLLDVTTLSQLRKDGHPSIYGLGGQRGMDCSHWCLAGVPDTWNQILYNAL 527
           PV LLD+TTLS LRKDGHPSIYGL G  GMDCSHWCL GVPDTWN+ILYN +
Sbjct: 307 PVTLLDITTLSLLRKDGHPSIYGLNGAAGMDCSHWCLPGVPDTWNEILYNLI 358


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