BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025307
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL98862.1| DEAD-box ATP-dependent RNA helicase, partial [Sil...    84   9e-15
ref|XP_003557638.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    82   3e-14
ref|XP_003626109.1| DEAD-box ATP-dependent RNA helicase [Medicag...    82   6e-14
gb|AEL98861.1| DEAD-box ATP-dependent RNA helicase, partial [Sil...    82   6e-14
emb|CBI31778.3| unnamed protein product [Vitis vinifera]               81   1e-13

>gb|AEL98862.1| DEAD-box ATP-dependent RNA helicase, partial [Silene latifolia]
          Length = 782

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/84 (52%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
 Frame = +1

Query: 190 VVVGTPDLVALQFNADNLVLSDVESVVLYEAHEL--AGFDEDLKFILGKLPKKRQSMIFS 363
           VVVGTP  +    N ++L L +VE +VL EA ++   GF+ED++ IL KLPK+RQSM+FS
Sbjct: 254 VVVGTPGRIIDLVNGNSLKLGEVEFLVLDEADQMLAVGFEEDVEVILEKLPKERQSMLFS 313

Query: 364 SSMSTWLRKFSEKNLKDPFTIDLV 435
           ++M TW++K S K L +P TIDLV
Sbjct: 314 ATMPTWIKKLSRKYLDNPLTIDLV 337


>ref|XP_003557638.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like
           [Brachypodium distachyon]
          Length = 604

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
 Frame = +1

Query: 190 VVVGTPDLVALQFNADNLVLSDVESVVLYEAHEL--AGFDEDLKFILGKLPKKRQSMIFS 363
           VVVGTP  +       NL LS+++ VVL EA ++   GFDED++ I+ KLP+ RQSM+FS
Sbjct: 208 VVVGTPGRIIDLLRRGNLNLSEIQFVVLDEADQMLAVGFDEDVEVIMEKLPQNRQSMLFS 267

Query: 364 SSMSTWLRKFSEKNLKDPFTIDLV 435
           ++M +W+RK S + LKDP  IDLV
Sbjct: 268 ATMPSWIRKLSNQYLKDPVIIDLV 291


>ref|XP_003626109.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|87240993|gb|ABD32851.1| Helicase, C-terminal; Zinc
           finger, CCHC-type; GUCT [Medicago truncatula]
           gi|355501124|gb|AES82327.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 753

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = +1

Query: 190 VVVGTPDLVALQFNADNLVLSDVESVVLYEAHEL--AGFDEDLKFILGKLPKKRQSMIFS 363
           VVVGTP  +    N + L LS+VE +VL EA ++   GF+ED++ IL KLP KRQSM+FS
Sbjct: 235 VVVGTPGRLIDLINGNTLKLSEVEYLVLDEADQMLAVGFEEDVEVILEKLPAKRQSMLFS 294

Query: 364 SSMSTWLRKFSEKNLKDPFTIDLV 435
           ++M +W++K + K L +P TIDLV
Sbjct: 295 ATMPSWVKKLARKYLNNPLTIDLV 318


>gb|AEL98861.1| DEAD-box ATP-dependent RNA helicase, partial [Silene latifolia]
          Length = 782

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
 Frame = +1

Query: 190 VVVGTPDLVALQFNADNLVLSDVESVVLYEAHEL--AGFDEDLKFILGKLPKKRQSMIFS 363
           VVVGTP  +    N  +L L +VE +VL EA ++   GF+ED++ IL  LPK+RQSM+FS
Sbjct: 254 VVVGTPGRIIDLINGKSLKLGEVEFLVLDEADQMLAVGFEEDVEVILETLPKERQSMLFS 313

Query: 364 SSMSTWLRKFSEKNLKDPFTIDLV 435
           ++M TW++K S K L +P TIDLV
Sbjct: 314 ATMPTWIKKLSRKYLDNPLTIDLV 337


>emb|CBI31778.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = +1

Query: 190 VVVGTPDLVALQFNADNLVLSDVESVVLYEAHEL--AGFDEDLKFILGKLPKKRQSMIFS 363
           VVVGTP  +        L LS+V+ VVL EA ++   GF+ED++ IL KLP+ RQSM+FS
Sbjct: 240 VVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQSMMFS 299

Query: 364 SSMSTWLRKFSEKNLKDPFTIDLV 435
           ++M +W+RK ++K LK+P TIDLV
Sbjct: 300 ATMPSWIRKLTQKYLKNPLTIDLV 323