BLASTX nr result

ID: Coptis25_contig00025295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025295
         (1403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540865.1| PREDICTED: G-type lectin S-receptor-like ser...   119   3e-44
ref|XP_002271602.1| PREDICTED: wall-associated receptor kinase-l...   117   2e-41
ref|XP_003597066.1| Cysteine-rich receptor-like protein kinase [...   120   2e-41
emb|CAN69970.1| hypothetical protein VITISV_001450 [Vitis vinifera]   116   2e-41
ref|XP_002524225.1| kinase, putative [Ricinus communis] gi|22353...   118   5e-40

>ref|XP_003540865.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At4g03230-like [Glycine max]
          Length = 991

 Score =  119 bits (298), Expect(3) = 3e-44
 Identities = 55/84 (65%), Positives = 68/84 (80%)
 Frame = -1

Query: 335 ENDKFRGNGKEELDVPFFDFRSIAAATENFSDSNKLGQGGFGPVYKGKLSGGQEIAVKRL 156
           E+ +F+ +  + +D+P+F   SI  AT NF+++NKLGQGGFGPVYKGK  GGQEIAVKRL
Sbjct: 644 ESSRFKEDDAQAIDIPYFHLESILDATNNFANTNKLGQGGFGPVYKGKFPGGQEIAVKRL 703

Query: 155 SRTSGQGLEEFKTEIILIAKLQHR 84
           S  SGQGLEEFK E++LIAKLQHR
Sbjct: 704 SSCSGQGLEEFKNEVVLIAKLQHR 727



 Score = 61.2 bits (147), Expect(3) = 3e-44
 Identities = 25/55 (45%), Positives = 34/55 (61%)
 Frame = -2

Query: 589 VEIGWE*PLEPFCNLPKDCDDWPHSACMPERSGTGNRRCICISSFRWDPLAGYCT 425
           +E+ WE PLEP C+   DC +WP+S C    S  G +RC+C ++F WD L   CT
Sbjct: 565 IELSWEQPLEPICSSLLDCKEWPNSTC--NTSSDGKKRCLCNTNFLWDGLKLNCT 617



 Score = 46.6 bits (109), Expect(3) = 3e-44
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = -2

Query: 82  NLVRLLGCCIQGDEMLLLYEYMPKKSL 2
           NLVRLLG C++GDE +L+YEYMP +SL
Sbjct: 728 NLVRLLGYCVEGDEKMLVYEYMPNRSL 754



 Score = 73.6 bits (179), Expect(2) = 9e-21
 Identities = 43/111 (38%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
 Frame = -3

Query: 1377 DGFYPLKNVKAVVPTSAFEAATAESCRTECLSRC-CNAYAYTNGSS-----AGIISCLIW 1216
            D F  LK +K   P + F A   E C +ECL+ C C AY+Y +        +G + C IW
Sbjct: 365  DTFLSLKMMKVGNPDAQFNAKDEEECMSECLNNCQCYAYSYEDTEKGRLGDSGDVVCWIW 424

Query: 1215 DGSLRVFTGETTIDPYDIFVRIDASEIVTNRRLCQNCGIHAIPYPLSTGPN 1063
               L     E   D  D+ VR+  S+I +  R C  CG + IPYPLSTGP+
Sbjct: 425  SEDLNNLEEEYE-DGCDLHVRVAVSDIESTGRNCGTCGTNFIPYPLSTGPS 474



 Score = 54.3 bits (129), Expect(2) = 9e-21
 Identities = 29/73 (39%), Positives = 40/73 (54%)
 Frame = -2

Query: 1063 CGNPAYRNFECDDSTGYLTFNALDSSYAVNKIIPEMRTIVINSESSNFNSCYAKSYHSDI 884
            CG+P Y +F C+ STG L F     +Y V  I PE +  +I+ +  N  +C   S    +
Sbjct: 475  CGDPMYFSFHCNISTGELDFETPGGTYQVISINPEAQKFLIHRK--NVLNCDQSSRDKFL 532

Query: 883  QLNPSLPFHMTSN 845
             LN S PFH+TSN
Sbjct: 533  PLNKSFPFHLTSN 545


>ref|XP_002271602.1| PREDICTED: wall-associated receptor kinase-like 20 [Vitis vinifera]
            gi|297740320|emb|CBI30502.3| unnamed protein product
            [Vitis vinifera]
          Length = 636

 Score =  117 bits (294), Expect(4) = 2e-41
 Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 5/223 (2%)
 Frame = -2

Query: 1063 CGNPAYRNFECDDSTGYLTFNALD-SSYAVNKIIPEMRTIVINSESSNFNSCYAKSYH-S 890
            CG+ +Y+   C+   G L F+AL  SSY +  I P  R +++   S   N+C        
Sbjct: 46   CGDQSYK-VRCN--AGTLWFDALSQSSYVITSINPGTRRMIVKPASLLANTCITTDIQVG 102

Query: 889  DIQLNPSLPFHMTSNNTIFMFDCPSPLRSSGTDCNLSSLCPMIMLDKMQCFSSMRT--CC 716
             +QL+   P+++ S+NTI + +C + + +S  +C+ +S+C   + + +   +   T  CC
Sbjct: 103  GLQLDRISPYNIPSSNTIMLMNCSNAVLNSSVNCSPNSICHAYIRENVVAAACRSTAKCC 162

Query: 715  SYIAGKSS*TLHRIDVLNTGCEFYASVHNDLIRLPASDWSYV-VEIGWE*PLEPFCNLPK 539
             + AG      ++I V + GC  Y S  N    LP   W    +EI W  P EP C +PK
Sbjct: 163  WFKAGGPV-NAYKIGVRDEGCMAYQSFVNLATSLPVKRWPEPGLEIEWALPQEPICKIPK 221

Query: 538  DCDDWPHSACMPERSGTGNRRCICISSFRWDPLAGYCTKERLE 410
            DC    +S C+P+ +  G RRC C + F W P+ G C   + E
Sbjct: 222  DCSTLLNSMCLPDGAILGQRRCFCKAGFHWGPINGLCQNLKCE 264



 Score = 53.5 bits (127), Expect(4) = 2e-41
 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
 Frame = -1

Query: 407 SLSVIIPVTTIV-----GLLFLGTGKMFKENDKFRGNGKEELDVPFFDFRSIAAATENFS 243
           ++ +++PV  +V      L     G + K+ +              F  + I  AT NFS
Sbjct: 288 AILILVPVGILVCRHRQNLKREAQGSLIKKREDMLNANNSGKMAKIFSGKEIKRATNNFS 347

Query: 242 DSNKLGQGGFGPVYKGKLSGGQEIAVKRLSRTSGQGLEEFKTEIILIAKLQHR 84
             N +G GGF  V+KG L  G   AVKR    + +G ++   E+ ++ ++ HR
Sbjct: 348 KDNFIGSGGFSEVFKGILDDGTVTAVKRAKLGNTKGTDQVLNEVRILCQVNHR 400



 Score = 37.0 bits (84), Expect(4) = 2e-41
 Identities = 13/26 (50%), Positives = 22/26 (84%)
 Frame = -2

Query: 79  LVRLLGCCIQGDEMLLLYEYMPKKSL 2
           LVRLLGCC++ ++ +++YEY+P  +L
Sbjct: 402 LVRLLGCCVELEQPIMIYEYIPNGTL 427



 Score = 30.0 bits (66), Expect(4) = 2e-41
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 1116 CQNCGIHAIPYPLSTGP 1066
            C +CG   +PYPLSTGP
Sbjct: 28   CGDCGRIPVPYPLSTGP 44


>ref|XP_003597066.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]
           gi|355486114|gb|AES67317.1| Cysteine-rich receptor-like
           protein kinase [Medicago truncatula]
          Length = 950

 Score =  120 bits (300), Expect(3) = 2e-41
 Identities = 56/77 (72%), Positives = 65/77 (84%)
 Frame = -1

Query: 314 NGKEELDVPFFDFRSIAAATENFSDSNKLGQGGFGPVYKGKLSGGQEIAVKRLSRTSGQG 135
           N  E ++VP++ FRSI AAT NFSDSNKLGQGG+GPVYKG+  GGQEIA+KRLS  S QG
Sbjct: 613 NDSESIEVPYYTFRSIQAATNNFSDSNKLGQGGYGPVYKGRFPGGQEIAIKRLSSVSTQG 672

Query: 134 LEEFKTEIILIAKLQHR 84
           L+EFK EI+LIAKLQHR
Sbjct: 673 LQEFKNEIVLIAKLQHR 689



 Score = 54.3 bits (129), Expect(3) = 2e-41
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
 Frame = -2

Query: 655 CEFYASVHNDLIRLP--ASDWSYV---VEIGWE*PLEPFCNLPKDCDDWPHSACMPERSG 491
           C+  +S  ND    P   ++W +    +E+ W    +P C+    C  WPHS C+   SG
Sbjct: 502 CDDSSSYQNDKPSSPFNVTNWCFKDDQIEVNWAAAPQPQCDEYFSCKSWPHSTCIANSSG 561

Query: 490 TGNRRCICISSFRWDPLAGYCTKERLEDHCQ 398
            G  RC C S + W+P +  C K+++    Q
Sbjct: 562 -GENRCHCDSKYIWNPSSLSCIKDKVSIQIQ 591



 Score = 43.5 bits (101), Expect(3) = 2e-41
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = -2

Query: 82  NLVRLLGCCIQGDEMLLLYEYMPKKSL 2
           NLVRL G CI+GDE +LLYEYM  KSL
Sbjct: 690 NLVRLRGYCIKGDEKILLYEYMSNKSL 716



 Score = 71.2 bits (173), Expect(2) = 5e-15
 Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
 Frame = -3

Query: 1371 FYPLKNVKAVVPTSAFEAATAESCRTECLSRC-CNAYAY-TNGSSAGIISCLIWDGSLRV 1198
            F  L N+K   P   F + T   C++ CL++C CNAY+Y    +     SC IW   L  
Sbjct: 349  FIKLTNIKVGNPDQGFSSETKADCQSLCLNKCSCNAYSYKATYNDRSYFSCWIWTRQLPT 408

Query: 1197 FTGETTIDPYDIFVRIDASEIVTNRRLCQNCGIHAIPYPLSTGP 1066
               E   D  D  + +++S+I +  + C  CG + IPYPLSTGP
Sbjct: 409  LQEEQD-DGRDFSILVNSSDIESTAKSCGPCGTYIIPYPLSTGP 451



 Score = 37.4 bits (85), Expect(2) = 5e-15
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = -2

Query: 1063 CGNPAYRNFECDDSTGYLTFNALD-SSYAVNKIIPEMRTIVINSESSNFNSCYAKSYHSD 887
            CG+P Y  F C+  TG ++F   D  SY V  I    R   I +  +N +   + SY +D
Sbjct: 453  CGDPMYNKFNCNLLTGQVSFMMPDGKSYRVTLIDEAGRKFYIQTNDTN-HCDDSSSYQND 511

Query: 886  IQLNPSLPFHMTS 848
                PS PF++T+
Sbjct: 512  ---KPSSPFNVTN 521


>emb|CAN69970.1| hypothetical protein VITISV_001450 [Vitis vinifera]
          Length = 636

 Score =  116 bits (291), Expect(4) = 2e-41
 Identities = 69/223 (30%), Positives = 111/223 (49%), Gaps = 5/223 (2%)
 Frame = -2

Query: 1063 CGNPAYRNFECDDSTGYLTFNALD-SSYAVNKIIPEMRTIVINSESSNFNSCYAKSYH-S 890
            CG+ +Y+   C+   G L F+AL  SSY +  I P  R +++   S   N+C        
Sbjct: 46   CGDQSYK-VRCN--AGTLWFDALSQSSYVITSINPGTRRMIVKPASLLANTCITTDIQVG 102

Query: 889  DIQLNPSLPFHMTSNNTIFMFDCPSPLRSSGTDCNLSSLCPMIMLDKMQCFSSMRT--CC 716
             +QL+   P+++ S+NTI + +C + + +S  +C+ +S+C   + + +   +   T  CC
Sbjct: 103  GLQLDRISPYNIPSSNTIMLMNCSNAVLNSSVNCSPNSICHAYIRENVAAAACRSTXKCC 162

Query: 715  SYIAGKSS*TLHRIDVLNTGCEFYASVHNDLIRLPASDWSYV-VEIGWE*PLEPFCNLPK 539
             +  G      ++I V + GC  Y S  N    LP   W    +EI W  P EP C +PK
Sbjct: 163  WFKTGGPV-NAYKIGVRDEGCMAYQSFVNLATSLPVKRWPEPGLEIEWALPQEPICKIPK 221

Query: 538  DCDDWPHSACMPERSGTGNRRCICISSFRWDPLAGYCTKERLE 410
            DC    +S C+P+ +  G RRC C + F W P+ G C   + E
Sbjct: 222  DCSTLLNSMCLPDGAILGQRRCFCKAGFHWGPINGLCQNLKCE 264



 Score = 53.5 bits (127), Expect(4) = 2e-41
 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
 Frame = -1

Query: 407 SLSVIIPVTTIV-----GLLFLGTGKMFKENDKFRGNGKEELDVPFFDFRSIAAATENFS 243
           ++ +++PV  +V      L     G + K+ +              F  + I  AT NFS
Sbjct: 288 AILILVPVGILVCRHRQNLKREAQGSLIKKREDMLNANNSGKMAKIFSGKEIKRATNNFS 347

Query: 242 DSNKLGQGGFGPVYKGKLSGGQEIAVKRLSRTSGQGLEEFKTEIILIAKLQHR 84
             N +G GGF  V+KG L  G   AVKR    + +G ++   E+ ++ ++ HR
Sbjct: 348 KDNFIGSGGFSEVFKGILDDGTVTAVKRAKLGNTKGTDQVLNEVRILCQVNHR 400



 Score = 37.0 bits (84), Expect(4) = 2e-41
 Identities = 13/26 (50%), Positives = 22/26 (84%)
 Frame = -2

Query: 79  LVRLLGCCIQGDEMLLLYEYMPKKSL 2
           LVRLLGCC++ ++ +++YEY+P  +L
Sbjct: 402 LVRLLGCCVELEQPIMIYEYIPNGTL 427



 Score = 30.8 bits (68), Expect(4) = 2e-41
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 1116 CQNCGIHAIPYPLSTGP 1066
            C +CG   +PYPLSTGP
Sbjct: 28   CGDCGRXPVPYPLSTGP 44


>ref|XP_002524225.1| kinase, putative [Ricinus communis] gi|223536502|gb|EEF38149.1|
            kinase, putative [Ricinus communis]
          Length = 637

 Score =  118 bits (295), Expect(4) = 5e-40
 Identities = 76/222 (34%), Positives = 110/222 (49%), Gaps = 8/222 (3%)
 Frame = -2

Query: 1063 CGNPAYRNFECDDSTGYLTFNALDSSYAVNKIIPEMRTIVINSESSNFNSCYAKSY-HSD 887
            CG+ +Y+   C+ ST  L F+ +++SY +  I    + +VI       N+C    Y H  
Sbjct: 50   CGDQSYK-ITCNAST--LVFDTVNNSYPIISIDQSTQRLVIQPADIIPNTCMVSDYIHQG 106

Query: 886  IQLNPSLPFHMTSNNTIFMFDCPSPLRSSGTDCNLSSLCPMIM-----LDKMQCFSSMRT 722
            IQLN SLPF++TS+NT+ + +C   +     DC+ +SLC +         +  C +    
Sbjct: 107  IQLNSSLPFNITSSNTVMLMNCSESILDQPLDCSATSLCHLYANSTRGRQESPC-ADFSL 165

Query: 721  CCSYIAGKSS*TLHRIDVLNT-GCEFYASVHNDLIRLPASDWSYV-VEIGWE*PLEPFCN 548
            CC+Y AG S  + +RI +    GC  Y    N    LP   W    +EI WE P EP C 
Sbjct: 166  CCTYKAGGSP-SAYRIRIREAGGCRAYKIFVNLDTDLPVDRWQDPGLEIQWEQPQEPVCG 224

Query: 547  LPKDCDDWPHSACMPERSGTGNRRCICISSFRWDPLAGYCTK 422
               DCD    SAC P+ + +G +RC C    RWDP  G C +
Sbjct: 225  SQVDCDG--SSACGPDPNISGVKRCYCKVGLRWDPTQGICAQ 264



 Score = 50.4 bits (119), Expect(4) = 5e-40
 Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
 Frame = -1

Query: 407 SLSVIIPVTTIVGLLFLGTGKMFKENDKFRGNGKEEL-------DVPFFDFRSIAAATEN 249
           SLSV++   TI G+      K  KE  +     +EE+           F  + I  AT +
Sbjct: 290 SLSVLLLAITI-GVPLYKHNKGIKEAQERLARHREEILSADGSKTAKLFTGKEIKKATNS 348

Query: 248 FSDSNKLGQGGFGPVYKGKLSGGQEIAVKRLSRTSGQGLEEFKTEIILIAKLQHR 84
           FS    +G GG+G VYKG L  G  +AVK     + +  ++   E+ ++ ++ HR
Sbjct: 349 FSKDRLIGAGGYGEVYKGVLDDGTVVAVKCAKLGNTKSTDQLLNEVRILCQVNHR 403



 Score = 33.9 bits (76), Expect(4) = 5e-40
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -3

Query: 1116 CQNCGIHAIPYPLSTGPNAEIQLIAIS 1036
            C NCG  ++PYPLSTGP    Q   I+
Sbjct: 32   CPNCGNMSVPYPLSTGPTCGDQSYKIT 58



 Score = 30.8 bits (68), Expect(4) = 5e-40
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -2

Query: 91  NTGNLVRLLGCCIQGDEMLLLYEYMPKKSL 2
           N  +LV LLGCC++  + +L+YEY+   +L
Sbjct: 401 NHRSLVGLLGCCVELVQPILVYEYIQNGTL 430


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