BLASTX nr result
ID: Coptis25_contig00025284
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025284 (342 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266532.2| PREDICTED: uncharacterized protein LOC100255... 94 1e-17 emb|CBI31917.3| unnamed protein product [Vitis vinifera] 94 1e-17 ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212... 81 1e-13 ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicag... 70 1e-10 ref|XP_003525566.1| PREDICTED: uncharacterized protein LOC100814... 67 1e-09 >ref|XP_002266532.2| PREDICTED: uncharacterized protein LOC100255681 [Vitis vinifera] Length = 263 Score = 93.6 bits (231), Expect = 1e-17 Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 4/105 (3%) Frame = -3 Query: 304 TRTNLYKNPSFSYNKDLSLSSVLENLKAYNVATANT----PAPXXXXXXXXXXXXXXXXS 137 TRTN YKNPSFSYN+D SLSSVL+NLKAYN+AT + +P S Sbjct: 3 TRTNFYKNPSFSYNRDFSLSSVLQNLKAYNIATGSASPTDESPPANEKKVNRKRRPDRRS 62 Query: 136 TPKRNRDNPVYDLDGPLTHQNFIQKRRKETGSSAQFIQELSPDIL 2 P +N + + + DGP++HQ+FI+KRRKE SS Q QEL+PDIL Sbjct: 63 PPCQNPE--LKETDGPMSHQDFIKKRRKEV-SSGQVYQELTPDIL 104 >emb|CBI31917.3| unnamed protein product [Vitis vinifera] Length = 448 Score = 93.6 bits (231), Expect = 1e-17 Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 4/105 (3%) Frame = -3 Query: 304 TRTNLYKNPSFSYNKDLSLSSVLENLKAYNVATANT----PAPXXXXXXXXXXXXXXXXS 137 TRTN YKNPSFSYN+D SLSSVL+NLKAYN+AT + +P S Sbjct: 3 TRTNFYKNPSFSYNRDFSLSSVLQNLKAYNIATGSASPTDESPPANEKKVNRKRRPDRRS 62 Query: 136 TPKRNRDNPVYDLDGPLTHQNFIQKRRKETGSSAQFIQELSPDIL 2 P +N + + + DGP++HQ+FI+KRRKE SS Q QEL+PDIL Sbjct: 63 PPCQNPE--LKETDGPMSHQDFIKKRRKEV-SSGQVYQELTPDIL 104 >ref|XP_004152431.1| PREDICTED: uncharacterized protein LOC101212105 [Cucumis sativus] gi|449513293|ref|XP_004164287.1| PREDICTED: uncharacterized protein LOC101227135 [Cucumis sativus] Length = 443 Score = 80.9 bits (198), Expect = 1e-13 Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 8/109 (7%) Frame = -3 Query: 304 TRTNLYKNPSFSYNKDLSLSSVLENLKAYNVATANTPAPXXXXXXXXXXXXXXXXSTPKR 125 +RTN YKNPS SY KDL LSS L+NL+AYN+AT N P P KR Sbjct: 3 SRTNFYKNPSISYKKDLHLSSALQNLRAYNIATGNAP-PTDVQVQSPPVPVVKKNENRKR 61 Query: 124 NRD-----NPVYDL---DGPLTHQNFIQKRRKETGSSAQFIQELSPDIL 2 R+ +YD+ DGP++HQ++I++RRKE S + + L+ D+L Sbjct: 62 QREPELCGTQMYDVGNSDGPMSHQDYIERRRKEANKSQPY-ETLTEDVL 109 >ref|XP_003608723.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] gi|355509778|gb|AES90920.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula] Length = 452 Score = 70.5 bits (171), Expect = 1e-10 Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 7/109 (6%) Frame = -3 Query: 307 STRTNLYKNPSFSYNKDLSLSSVLENLKAYNVATAN-----TPAPXXXXXXXXXXXXXXX 143 S RTN YKNPS SYN++LSLSSVL+NL AYN+AT N P P Sbjct: 2 SNRTNFYKNPSISYNRNLSLSSVLQNLHAYNIATGNITSDDQPPPAPAPTASLKRRRHPR 61 Query: 142 XSTPKRN-RDNPVYDLDGPLTHQNFIQKRRKETGSSAQFIQ-ELSPDIL 2 + N N V D ++H ++I KRRKE S+ + EL+ D+L Sbjct: 62 PPQSRHNHHKNDVDDDPSSMSHTDYILKRRKEVDSAKNCDRVELTEDVL 110 >ref|XP_003525566.1| PREDICTED: uncharacterized protein LOC100814892 [Glycine max] Length = 446 Score = 67.4 bits (163), Expect = 1e-09 Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 15/116 (12%) Frame = -3 Query: 304 TRTNLYKNPSFSYNKDLSLSSVLENLKAYNVATANTPA--PXXXXXXXXXXXXXXXXSTP 131 TRTN YKNPS SY K LS+SSVL+NL AYN+A N P P TP Sbjct: 3 TRTNFYKNPSISYKKRLSISSVLQNLHAYNIAAGNVPPADPPQATSTANVPPGNPPHLTP 62 Query: 130 ------KRNRDNPVY------DLDGPLTHQNFIQKRRKETGSSAQFIQ-ELSPDIL 2 RN + P + D ++H ++IQ RRKE SS + EL+ ++L Sbjct: 63 SARLKRSRNPEPPEFLREYRDDAPSSMSHHDYIQNRRKEVVSSRNHDRVELTEEVL 118