BLASTX nr result

ID: Coptis25_contig00025282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025282
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_002879240.1| ATPDR3/PDR3 [Arabidopsis lyrata subsp. lyrat...   120   1e-25
gb|AAC31858.1| putative ABC transporter [Arabidopsis thaliana]        117   7e-25
ref|NP_180555.2| ABC transporter G family member 31 [Arabidopsis...   117   7e-25
ref|XP_002525637.1| ATP-binding cassette transporter, putative [...   115   3e-24

>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
            predicted protein [Populus trichocarpa]
          Length = 1432

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/69 (86%), Positives = 65/69 (94%)
 Frame = +3

Query: 3    EGDIRISGHPKEQSTFARISGYVEQTDIHSPQVTVEESLLFSSMLRLPKEVSKESRIEFV 182
            EGDI+ISG+PKEQ TFARISGYVEQ DIHSPQ+T+EESLLFSS LRLPKEVSKE R+EFV
Sbjct: 898  EGDIKISGYPKEQRTFARISGYVEQNDIHSPQLTIEESLLFSSSLRLPKEVSKEQRVEFV 957

Query: 183  EEVMRLVEL 209
            EEVMRLVEL
Sbjct: 958  EEVMRLVEL 966


>ref|XP_002879240.1| ATPDR3/PDR3 [Arabidopsis lyrata subsp. lyrata]
            gi|297325079|gb|EFH55499.1| ATPDR3/PDR3 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1428

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/69 (86%), Positives = 63/69 (91%)
 Frame = +3

Query: 3    EGDIRISGHPKEQSTFARISGYVEQTDIHSPQVTVEESLLFSSMLRLPKEVSKESRIEFV 182
            EGDIRISGHPKEQ TFARISGYVEQ DIHSPQVTVEESL FS+ LRLPKE+SKE + EFV
Sbjct: 896  EGDIRISGHPKEQQTFARISGYVEQNDIHSPQVTVEESLWFSASLRLPKEISKEQKKEFV 955

Query: 183  EEVMRLVEL 209
            EEVMRLVEL
Sbjct: 956  EEVMRLVEL 964


>gb|AAC31858.1| putative ABC transporter [Arabidopsis thaliana]
          Length = 1443

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/69 (84%), Positives = 63/69 (91%)
 Frame = +3

Query: 3    EGDIRISGHPKEQSTFARISGYVEQTDIHSPQVTVEESLLFSSMLRLPKEVSKESRIEFV 182
            EGDIRISGHPKEQ TFARISGYVEQ DIHSPQVTVEESL FS+ LRLPKE++KE + EFV
Sbjct: 911  EGDIRISGHPKEQQTFARISGYVEQNDIHSPQVTVEESLWFSASLRLPKEITKEQKKEFV 970

Query: 183  EEVMRLVEL 209
            E+VMRLVEL
Sbjct: 971  EQVMRLVEL 979


>ref|NP_180555.2| ABC transporter G family member 31 [Arabidopsis thaliana]
            gi|75326886|sp|Q7PC88.1|AB31G_ARATH RecName: Full=ABC
            transporter G family member 31; Short=ABC transporter
            ABCG.31; Short=AtABCG31; AltName: Full=Probable
            pleiotropic drug resistance protein 3
            gi|28144325|tpg|DAA00871.1| TPA_exp: PDR3 ABC transporter
            [Arabidopsis thaliana] gi|330253231|gb|AEC08325.1| ABC
            transporter G family member 31 [Arabidopsis thaliana]
          Length = 1426

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/69 (84%), Positives = 63/69 (91%)
 Frame = +3

Query: 3    EGDIRISGHPKEQSTFARISGYVEQTDIHSPQVTVEESLLFSSMLRLPKEVSKESRIEFV 182
            EGDIRISGHPKEQ TFARISGYVEQ DIHSPQVTVEESL FS+ LRLPKE++KE + EFV
Sbjct: 894  EGDIRISGHPKEQQTFARISGYVEQNDIHSPQVTVEESLWFSASLRLPKEITKEQKKEFV 953

Query: 183  EEVMRLVEL 209
            E+VMRLVEL
Sbjct: 954  EQVMRLVEL 962


>ref|XP_002525637.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223535073|gb|EEF36755.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1433

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/69 (84%), Positives = 63/69 (91%)
 Frame = +3

Query: 3    EGDIRISGHPKEQSTFARISGYVEQTDIHSPQVTVEESLLFSSMLRLPKEVSKESRIEFV 182
            EGDI+ISG+PKEQ TF+RISGYVEQ DIHSPQVTVEESL FSS LRLPK+V+KE R EFV
Sbjct: 901  EGDIKISGYPKEQGTFSRISGYVEQNDIHSPQVTVEESLWFSSSLRLPKDVTKEQRHEFV 960

Query: 183  EEVMRLVEL 209
            EEVMRLVEL
Sbjct: 961  EEVMRLVEL 969


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