BLASTX nr result

ID: Coptis25_contig00025281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025281
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279155.1| PREDICTED: ABC transporter G family member 3...   147   1e-33
emb|CBI15958.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_002525637.1| ATP-binding cassette transporter, putative [...   142   2e-32
ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_003544291.1| PREDICTED: ABC transporter G family member 3...   142   3e-32

>ref|XP_002279155.1| PREDICTED: ABC transporter G family member 31-like [Vitis vinifera]
          Length = 1415

 Score =  147 bits (370), Expect = 1e-33
 Identities = 74/86 (86%), Positives = 79/86 (91%), Gaps = 2/86 (2%)
 Frame = +3

Query: 24   SVETGAAKKGMILPFQPLTMTFHNVNYFVDMPKEMS--DIPEKRLQLLSSVSGVFSPGVL 197
            + E G+ KKGM LPFQPLTMTFHNVNYFVDMPKEM+   IPEKRLQLLS+VSG+FSPGVL
Sbjct: 796  AAEEGSKKKGMSLPFQPLTMTFHNVNYFVDMPKEMTAKGIPEKRLQLLSNVSGIFSPGVL 855

Query: 198  TALVGSSGAGKTTLMDVLAGRKTGGY 275
            TALVGSSGAGKTTLMDVLAGRKTGGY
Sbjct: 856  TALVGSSGAGKTTLMDVLAGRKTGGY 881


>emb|CBI15958.3| unnamed protein product [Vitis vinifera]
          Length = 1483

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/82 (89%), Positives = 77/82 (93%), Gaps = 2/82 (2%)
 Frame = +3

Query: 36   GAAKKGMILPFQPLTMTFHNVNYFVDMPKEMS--DIPEKRLQLLSSVSGVFSPGVLTALV 209
            G+ KKGM LPFQPLTMTFHNVNYFVDMPKEM+   IPEKRLQLLS+VSG+FSPGVLTALV
Sbjct: 869  GSKKKGMSLPFQPLTMTFHNVNYFVDMPKEMTAKGIPEKRLQLLSNVSGIFSPGVLTALV 928

Query: 210  GSSGAGKTTLMDVLAGRKTGGY 275
            GSSGAGKTTLMDVLAGRKTGGY
Sbjct: 929  GSSGAGKTTLMDVLAGRKTGGY 950


>ref|XP_002525637.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223535073|gb|EEF36755.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1433

 Score =  142 bits (359), Expect = 2e-32
 Identities = 71/79 (89%), Positives = 76/79 (96%), Gaps = 2/79 (2%)
 Frame = +3

Query: 45   KKGMILPFQPLTMTFHNVNYFVDMPKEMSD--IPEKRLQLLSSVSGVFSPGVLTALVGSS 218
            +KGMILPFQPLTMTFHNVNYFVDMPKEMS   +PEK+LQLLS+VSGVFSPGVLTALVG+S
Sbjct: 821  RKGMILPFQPLTMTFHNVNYFVDMPKEMSKQGVPEKKLQLLSNVSGVFSPGVLTALVGAS 880

Query: 219  GAGKTTLMDVLAGRKTGGY 275
            GAGKTTLMDVLAGRKTGGY
Sbjct: 881  GAGKTTLMDVLAGRKTGGY 899


>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
            predicted protein [Populus trichocarpa]
          Length = 1432

 Score =  142 bits (359), Expect = 2e-32
 Identities = 74/90 (82%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
 Frame = +3

Query: 12   QRSASVETGAAKKGMILPFQPLTMTFHNVNYFVDMPKEMSD--IPEKRLQLLSSVSGVFS 185
            Q ++    G+  KGMILPFQPLTMTFHNVNYFVDMPKEMS   I EK+LQLLS VSGVFS
Sbjct: 807  QENSDGNDGSKNKGMILPFQPLTMTFHNVNYFVDMPKEMSKQGITEKKLQLLSYVSGVFS 866

Query: 186  PGVLTALVGSSGAGKTTLMDVLAGRKTGGY 275
            PGVLTALVGSSGAGKTTLMDVLAGRKTGGY
Sbjct: 867  PGVLTALVGSSGAGKTTLMDVLAGRKTGGY 896


>ref|XP_003544291.1| PREDICTED: ABC transporter G family member 31-like [Glycine max]
          Length = 1440

 Score =  142 bits (358), Expect = 3e-32
 Identities = 73/78 (93%), Positives = 74/78 (94%), Gaps = 2/78 (2%)
 Frame = +3

Query: 48   KGMILPFQPLTMTFHNVNYFVDMPKEMSD--IPEKRLQLLSSVSGVFSPGVLTALVGSSG 221
            KGMILPFQPLTMTFHNVNYFVDMPKE+S   IPE RLQLLSSVSGVFSPGVLTALVGSSG
Sbjct: 824  KGMILPFQPLTMTFHNVNYFVDMPKELSKQGIPETRLQLLSSVSGVFSPGVLTALVGSSG 883

Query: 222  AGKTTLMDVLAGRKTGGY 275
            AGKTTLMDVLAGRKTGGY
Sbjct: 884  AGKTTLMDVLAGRKTGGY 901


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