BLASTX nr result

ID: Coptis25_contig00025276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025276
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631218.1| PREDICTED: probable non-specific lipid-trans...   103   2e-20
gb|ACM78621.1| non-specific lipid-transfer protein type 2 [Tamar...   102   5e-20
ref|XP_002279379.2| PREDICTED: non-specific lipid-transfer prote...   100   2e-19
ref|XP_003555069.1| PREDICTED: probable non-specific lipid-trans...    98   9e-19
ref|XP_003620406.1| Non-specific lipid-transfer protein [Medicag...    96   3e-18

>ref|XP_003631218.1| PREDICTED: probable non-specific lipid-transfer protein AKCS9-like
           [Vitis vinifera]
          Length = 92

 Score =  103 bits (257), Expect = 2e-20
 Identities = 45/93 (48%), Positives = 66/93 (70%)
 Frame = +2

Query: 41  IKISYLSLFFTLILLMSVVNVSRAATCVVAELITPCLGSTTYGAPTPSTCCTQVQRQRAC 220
           +K+SY+++ F L+LL     VS A TC   EL T C  +    +P  +TCC++++ QR+C
Sbjct: 1   MKMSYIAVCFALLLLFGEAQVSTAVTCSPMELST-CANAIISSSPPTATCCSKLKEQRSC 59

Query: 221 LCQYLRNPSLKPFINTPNTRKVVTSCGVPFPNC 319
           LCQY++NP+L+ FIN+PN RKV ++CG PFPNC
Sbjct: 60  LCQYVKNPNLQKFINSPNARKVASTCGSPFPNC 92


>gb|ACM78621.1| non-specific lipid-transfer protein type 2 [Tamarix hispida]
          Length = 92

 Score =  102 bits (253), Expect = 5e-20
 Identities = 43/93 (46%), Positives = 65/93 (69%)
 Frame = +2

Query: 41  IKISYLSLFFTLILLMSVVNVSRAATCVVAELITPCLGSTTYGAPTPSTCCTQVQRQRAC 220
           +K SY ++F  ++LL+S   VS A TC  A+L +PC+G+ T  +P    CC++V++Q+ C
Sbjct: 1   MKASYAAVFAVVMLLLSQTQVSTAVTCSPAQL-SPCVGAITSSSPPSGLCCSKVRQQKPC 59

Query: 221 LCQYLRNPSLKPFINTPNTRKVVTSCGVPFPNC 319
           LCQY++NP L+ F+NTPN +KV + C  PFP C
Sbjct: 60  LCQYMKNPYLRKFVNTPNAKKVASQCRTPFPRC 92


>ref|XP_002279379.2| PREDICTED: non-specific lipid-transfer protein 2-like [Vitis
           vinifera]
          Length = 92

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 40/93 (43%), Positives = 65/93 (69%)
 Frame = +2

Query: 41  IKISYLSLFFTLILLMSVVNVSRAATCVVAELITPCLGSTTYGAPTPSTCCTQVQRQRAC 220
           +K+SY+++   L+LL++  +++ A TC   EL + C+G+ T   P    CC++++ Q+ C
Sbjct: 1   MKVSYIAVCAVLVLLLAEAHITVAVTCSPTEL-SSCVGAITSSTPPSKLCCSKIKEQKPC 59

Query: 221 LCQYLRNPSLKPFINTPNTRKVVTSCGVPFPNC 319
           LCQYL+NP+LK F+N+PN RKV ++CG P P C
Sbjct: 60  LCQYLKNPNLKKFVNSPNARKVASTCGTPIPKC 92


>ref|XP_003555069.1| PREDICTED: probable non-specific lipid-transfer protein AKCS9-like
           [Glycine max]
          Length = 97

 Score = 97.8 bits (242), Expect = 9e-19
 Identities = 42/95 (44%), Positives = 63/95 (66%)
 Frame = +2

Query: 35  MKIKISYLSLFFTLILLMSVVNVSRAATCVVAELITPCLGSTTYGAPTPSTCCTQVQRQR 214
           MK    +  +    + L+ +  ++ A TC   EL +PCLG+ T  +P  +TCC +V+ QR
Sbjct: 4   MKKVCGFAIVVMAALFLVEMSPMAEAVTCSPVEL-SPCLGAITSSSPPSTTCCQKVREQR 62

Query: 215 ACLCQYLRNPSLKPFINTPNTRKVVTSCGVPFPNC 319
            CLC YL+NPSL+P++N+P +R+V +SCGVPFP C
Sbjct: 63  PCLCGYLKNPSLRPYVNSPGSRRVASSCGVPFPTC 97


>ref|XP_003620406.1| Non-specific lipid-transfer protein [Medicago truncatula]
           gi|217075044|gb|ACJ85882.1| unknown [Medicago
           truncatula] gi|355495421|gb|AES76624.1| Non-specific
           lipid-transfer protein [Medicago truncatula]
          Length = 92

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 41/93 (44%), Positives = 62/93 (66%)
 Frame = +2

Query: 41  IKISYLSLFFTLILLMSVVNVSRAATCVVAELITPCLGSTTYGAPTPSTCCTQVQRQRAC 220
           +K S +++   L+LL+  V VS A TC   +L + C+ + T   P  + CC++++ QR C
Sbjct: 1   MKASQIAICTFLVLLLINVQVSMAVTCSPVQL-SSCVSAITSSTPPSNLCCSKIKEQRPC 59

Query: 221 LCQYLRNPSLKPFINTPNTRKVVTSCGVPFPNC 319
           LCQY++NP+L+ F+NTPN RKV  +CG PFP C
Sbjct: 60  LCQYMKNPNLRKFVNTPNARKVANTCGTPFPRC 92


Top