BLASTX nr result

ID: Coptis25_contig00025249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025249
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protei...   111   5e-23
emb|CBI22195.3| unnamed protein product [Vitis vinifera]              107   1e-21
emb|CAN72934.1| hypothetical protein VITISV_020616 [Vitis vinifera]   106   2e-21
ref|XP_002517489.1| conserved hypothetical protein [Ricinus comm...   102   3e-20
ref|XP_002878022.1| hypothetical protein ARALYDRAFT_324042 [Arab...    90   2e-16

>ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protein homolog [Vitis
           vinifera]
          Length = 2223

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/102 (53%), Positives = 72/102 (70%)
 Frame = +2

Query: 2   AAGVAFCAALQLCLTPEELGYLIVRSLFCHTSVNSITCAKSESGDIVVKVPYKGDLYMDI 181
           AAGVAFCAALQ CL+PEE+G  I+  +F  T+  S    +S+ GD+++KVPYKGD+Y +I
Sbjct: 248 AAGVAFCAALQACLSPEEVGLFIMEGIFYQTNCYSANSGQSKFGDVILKVPYKGDVYTEI 307

Query: 182 GKFSVLSRLCLMRGILTTVPRTVLNNHFELSGDGSNRLGVDG 307
             F+VLSRLCL+RGILT V RTVL + F +S +  N     G
Sbjct: 308 CNFAVLSRLCLIRGILTAVSRTVLTSQFIVSRNDLNGFDPQG 349


>emb|CBI22195.3| unnamed protein product [Vitis vinifera]
          Length = 1789

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = +2

Query: 2   AAGVAFCAALQLCLTPEELGYLIVRSLFCHTSVNSITCAKSESGDIVVKVPYKGDLYMDI 181
           AAGVAFCAALQ CL+PEE+G  I+  +F  T+  S    +S+ GD+++KVPYKGD+Y +I
Sbjct: 248 AAGVAFCAALQACLSPEEVGLFIMEGIFYQTNCYSANSGQSKFGDVILKVPYKGDVYTEI 307

Query: 182 GKFSVLSRLCLMRGILTTVPRTVL 253
             F+VLSRLCL+RGILT V RTVL
Sbjct: 308 CNFAVLSRLCLIRGILTAVSRTVL 331


>emb|CAN72934.1| hypothetical protein VITISV_020616 [Vitis vinifera]
          Length = 2161

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/99 (52%), Positives = 69/99 (69%)
 Frame = +2

Query: 11  VAFCAALQLCLTPEELGYLIVRSLFCHTSVNSITCAKSESGDIVVKVPYKGDLYMDIGKF 190
           VAFCAALQ CL+PEE+G  I+  +F  T+  S    +S+ GD+++KVPYKGD+Y +I  F
Sbjct: 201 VAFCAALQACLSPEEVGLFIMEGIFYQTNCYSANSGQSKFGDVILKVPYKGDVYTEICNF 260

Query: 191 SVLSRLCLMRGILTTVPRTVLNNHFELSGDGSNRLGVDG 307
           +VLSRLCL+RGILT V RTVL + F +S +  N     G
Sbjct: 261 AVLSRLCLIRGILTAVSRTVLTSQFVVSRNDLNGFDPQG 299


>ref|XP_002517489.1| conserved hypothetical protein [Ricinus communis]
           gi|223543500|gb|EEF45031.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2190

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/106 (50%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2   AAGVAFCAALQLCLTPEELGYLIVRSLFCHTSVNSI--TCAKSESGDIVVKVPYKGDLYM 175
           AAGV+ CAALQ+CL+ +ELG  I++ +F  T+ N     C   E  D ++KVP+KGDL  
Sbjct: 227 AAGVSLCAALQVCLSAQELGLFIIQGIFSQTTCNVYGNNCDGGEFRDALLKVPFKGDLIS 286

Query: 176 DIGKFSVLSRLCLMRGILTTVPRTVLNNHFELSGDGSNRLGVDGSC 313
           ++G FSVLSRLCL+RGILT V RTVLN  F  S    N    +G+C
Sbjct: 287 EVGSFSVLSRLCLIRGILTAVSRTVLNLQFVESSSKLNGHEGNGTC 332


>ref|XP_002878022.1| hypothetical protein ARALYDRAFT_324042 [Arabidopsis lyrata subsp.
           lyrata] gi|297323860|gb|EFH54281.1| hypothetical protein
           ARALYDRAFT_324042 [Arabidopsis lyrata subsp. lyrata]
          Length = 2128

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/88 (53%), Positives = 61/88 (69%)
 Frame = +2

Query: 2   AAGVAFCAALQLCLTPEELGYLIVRSLFCHTSVNSITCAKSESGDIVVKVPYKGDLYMDI 181
           AAGV+FCAALQ+CL  EELG  I + +FC +SV  +T       DI+ K+P+ GD+  +I
Sbjct: 256 AAGVSFCAALQVCLKDEELGLFIAQGIFCWSSVVRLT-------DIISKIPFAGDICSEI 308

Query: 182 GKFSVLSRLCLMRGILTTVPRTVLNNHF 265
             FS LSRLCL+RGILTTV R +L + F
Sbjct: 309 CSFSSLSRLCLIRGILTTVSRGILVSSF 336


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