BLASTX nr result

ID: Coptis25_contig00025240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025240
         (1634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16457.3| unnamed protein product [Vitis vinifera]              613   e-173
ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig...   613   e-173
emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]   609   e-172
ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|2...   519   e-145
ref|XP_003552751.1| PREDICTED: uncharacterized protein LOC100820...   435   e-119

>emb|CBI16457.3| unnamed protein product [Vitis vinifera]
          Length = 1084

 Score =  613 bits (1582), Expect = e-173
 Identities = 316/514 (61%), Positives = 385/514 (74%), Gaps = 4/514 (0%)
 Frame = +2

Query: 38   SHSMHDSFKLSNLS-LHVEGQSVSDEYLEEES---YFSNIPNDFICPLTGELFEEPVTLE 205
            SH  H     +N S L    +SV D ++  +S   +FS+IP DFICPLTG LFE+PVT+E
Sbjct: 569  SHMFHAPIHRANESTLRTLARSVFDLHISSQSNRSFFSSIPQDFICPLTGRLFEDPVTIE 628

Query: 206  TGQTFERTAIKEWFDKGKRTCPITGKNLESLGLPITNFVLKRVIDRWKSEHCGNLLAFAS 385
            TGQTFER AI+EWF++G R CP+TGK LE LG+P+TNF+LKRVID WKSE+C +LLAFAS
Sbjct: 629  TGQTFERHAIREWFNQGNRNCPVTGKALEGLGVPLTNFILKRVIDGWKSENCRHLLAFAS 688

Query: 386  KMQGTSSEHGFKSKDQRAVLILEKLLVGFRTEDRLTNAKHLISLGGLQFLILRFELGNLE 565
            K++G+S EHG + KD+ A+  LE+ L G   E++LTNAKHLISLGGLQFL  RFELGNLE
Sbjct: 689  KVEGSSGEHGVEPKDETAIYALEQFLSGSSKEEKLTNAKHLISLGGLQFLTRRFELGNLE 748

Query: 566  EKSRILVLLSCCIEADGDCRNYIAKNINKTCLLELLHNKQVKSRGNAVMLLMELICLCRR 745
            EK+ +  L+  CIEAD  C+N IAK I K CLLELLH+KQ KSR NAV+LL ELIC+ R 
Sbjct: 749  EKTCVAALMCSCIEADYRCKNEIAKYIKKPCLLELLHSKQAKSRTNAVLLLTELICMHRW 808

Query: 746  TEITSFLSSMQKDEIMNTMHVLLVYLQSSPPDQRPXXXXXXXXXXXXXEQRKYSIYREEA 925
             ++T FLSS Q + IM+ MHVLLVYLQSS P+QRP             E RKYSIYREEA
Sbjct: 809  KDVTLFLSSFQNEGIMSAMHVLLVYLQSSSPEQRPLVAVLLLHLDLLVEPRKYSIYREEA 868

Query: 926  VDSIAVALECSLTDEKVRVLCCRALLILGGHISFSGEVVTENWLLRHAGFYDGCNINYVE 1105
            VD+I VALE SLTDE VR  CCRALLIL GH SFSG+V TE W+L+ AG  D  +++   
Sbjct: 869  VDAIVVALEGSLTDENVREKCCRALLILTGHFSFSGDVPTEKWILKPAGPMDSHDLSSCN 928

Query: 1106 KVEENFQIDETILLTEEEMAIEDWWKKLAASLLGNGRKSFLEIISKCLGCEDSSLVRTCL 1285
              E    +D TI L  EE A E+W++ L+A LLGNG+KSFLE ISKCLG + S LVR CL
Sbjct: 929  NEENGLLVDGTISLDAEEQAKEEWFRNLSAVLLGNGQKSFLEAISKCLGSDSSELVRVCL 988

Query: 1286 VTVAWMSRALTKMSDAEFQLSAFTALIPRLKEILENGDQVEHRVLASLALLNFSRISECR 1465
             TVAW+S AL+ +SDAEFQLSAF+ALI RL++ LEN +Q+EH++LAS +LL+FS+I ECR
Sbjct: 989  TTVAWLSSALSSLSDAEFQLSAFSALISRLRDNLENSEQIEHKILASASLLSFSKIPECR 1048

Query: 1466 VLMRTIGEEIMVPLQSLAVVTWTAKQLYTVISGE 1567
            VL+ TI EEI+VPL+SL  VTWTAK LYT ISGE
Sbjct: 1049 VLLMTIAEEIVVPLRSLVQVTWTAKHLYTTISGE 1082


>ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1148

 Score =  613 bits (1582), Expect = e-173
 Identities = 309/486 (63%), Positives = 374/486 (76%)
 Frame = +2

Query: 110  EYLEEESYFSNIPNDFICPLTGELFEEPVTLETGQTFERTAIKEWFDKGKRTCPITGKNL 289
            +Y  E S+FS+IP DFICPLTG LFE+PVT+ETGQTFER AI+EWF++G R CP+TGK L
Sbjct: 661  QYFNEGSFFSSIPQDFICPLTGRLFEDPVTIETGQTFERHAIREWFNQGNRNCPVTGKAL 720

Query: 290  ESLGLPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGFKSKDQRAVLILEKLLVG 469
            E LG+P+TNF+LKRVID WKSE+C +LLAFASK++G+S EHG + KD+ A+  LE+ L G
Sbjct: 721  EGLGVPLTNFILKRVIDGWKSENCRHLLAFASKVEGSSGEHGVEPKDETAIYALEQFLSG 780

Query: 470  FRTEDRLTNAKHLISLGGLQFLILRFELGNLEEKSRILVLLSCCIEADGDCRNYIAKNIN 649
               E++LTNAKHLISLGGLQFL  RFELGNLEEK+ +  L+  CIEAD  C+N IAK I 
Sbjct: 781  SSKEEKLTNAKHLISLGGLQFLTRRFELGNLEEKTCVAALMCSCIEADYRCKNEIAKYIK 840

Query: 650  KTCLLELLHNKQVKSRGNAVMLLMELICLCRRTEITSFLSSMQKDEIMNTMHVLLVYLQS 829
            K CLLELLH+KQ KSR NAV+LL ELIC+ R  ++T FLSS Q + IM+ MHVLLVYLQS
Sbjct: 841  KPCLLELLHSKQAKSRTNAVLLLTELICMHRWKDVTLFLSSFQNEGIMSAMHVLLVYLQS 900

Query: 830  SPPDQRPXXXXXXXXXXXXXEQRKYSIYREEAVDSIAVALECSLTDEKVRVLCCRALLIL 1009
            S P+QRP             E RKYSIYREEAVD+I VALE SLTDE VR  CCRALLIL
Sbjct: 901  SSPEQRPLVAVLLLHLDLLVEPRKYSIYREEAVDAIVVALEGSLTDENVREKCCRALLIL 960

Query: 1010 GGHISFSGEVVTENWLLRHAGFYDGCNINYVEKVEENFQIDETILLTEEEMAIEDWWKKL 1189
             GH SFSG+V TE W+L+ AG  D  +++     E    +D TI L  EE A E+W++ L
Sbjct: 961  TGHFSFSGDVPTEKWILKPAGPMDSHDLSSCNNEENGLLVDGTISLDAEEQAKEEWFRNL 1020

Query: 1190 AASLLGNGRKSFLEIISKCLGCEDSSLVRTCLVTVAWMSRALTKMSDAEFQLSAFTALIP 1369
            +A LLGNG+KSFLE ISKCLG + S LVR CL TVAW+S AL+ +SDAEFQLSAF+ALI 
Sbjct: 1021 SAVLLGNGQKSFLEAISKCLGSDSSELVRVCLTTVAWLSSALSSLSDAEFQLSAFSALIS 1080

Query: 1370 RLKEILENGDQVEHRVLASLALLNFSRISECRVLMRTIGEEIMVPLQSLAVVTWTAKQLY 1549
            RL++ LEN +Q+EH++LAS +LL+FS+I ECRVL+ TI EEI+VPL+SL  VTWTAK LY
Sbjct: 1081 RLRDNLENSEQIEHKILASASLLSFSKIPECRVLLMTIAEEIVVPLRSLVQVTWTAKHLY 1140

Query: 1550 TVISGE 1567
            T ISGE
Sbjct: 1141 TTISGE 1146


>emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]
          Length = 1148

 Score =  609 bits (1571), Expect = e-172
 Identities = 307/486 (63%), Positives = 372/486 (76%)
 Frame = +2

Query: 110  EYLEEESYFSNIPNDFICPLTGELFEEPVTLETGQTFERTAIKEWFDKGKRTCPITGKNL 289
            +Y  E S+FS+IP DFICPLTG LFE+PVT+ETGQTFER AI+EWF++G R CP+TGK L
Sbjct: 661  QYFNEGSFFSSIPQDFICPLTGRLFEDPVTIETGQTFERHAIREWFNQGNRNCPVTGKAL 720

Query: 290  ESLGLPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGFKSKDQRAVLILEKLLVG 469
            E LG+P+TNF+LKRVID WKSE+C +LLAFASK++G+S EHG + KD+ A+  LE+ L G
Sbjct: 721  EGLGVPLTNFILKRVIDGWKSENCRHLLAFASKVEGSSGEHGVEPKDETAIYALEQFLSG 780

Query: 470  FRTEDRLTNAKHLISLGGLQFLILRFELGNLEEKSRILVLLSCCIEADGDCRNYIAKNIN 649
               E++LTNAKHLISLGGLQFL  RFELGNLEEK+ +  L+  CIEAD  C+N IAK I 
Sbjct: 781  SSKEEKLTNAKHLISLGGLQFLTRRFELGNLEEKTCVAALMCSCIEADYRCKNEIAKYIK 840

Query: 650  KTCLLELLHNKQVKSRGNAVMLLMELICLCRRTEITSFLSSMQKDEIMNTMHVLLVYLQS 829
            K CLLELLH+KQ KSR NAV+LL ELIC+ R  ++T FLSS Q + IM+ MHVLLVYLQS
Sbjct: 841  KPCLLELLHSKQAKSRTNAVLLLTELICMHRWKDVTLFLSSFQNEGIMSAMHVLLVYLQS 900

Query: 830  SPPDQRPXXXXXXXXXXXXXEQRKYSIYREEAVDSIAVALECSLTDEKVRVLCCRALLIL 1009
            S P+QRP             E  KYSIYREEAVD+I VALE SLTDE VR  CCRALLIL
Sbjct: 901  SSPEQRPLVAVLLLHLDLLVEPXKYSIYREEAVDAIVVALEGSLTDENVREKCCRALLIL 960

Query: 1010 GGHISFSGEVVTENWLLRHAGFYDGCNINYVEKVEENFQIDETILLTEEEMAIEDWWKKL 1189
             GH SFSG+V TE W+L+ AG  D  +++     E    +D TI L  EE A E+W++ L
Sbjct: 961  TGHFSFSGDVPTEKWILKPAGPMDSHDLSSCNNEENGLLVDGTISLDAEEQAKEEWFRNL 1020

Query: 1190 AASLLGNGRKSFLEIISKCLGCEDSSLVRTCLVTVAWMSRALTKMSDAEFQLSAFTALIP 1369
            +A LLGNG+KSFLE ISKCLG +   LVR CL TVAW+S AL+ +SDAEFQLSAF+ALI 
Sbjct: 1021 SAVLLGNGQKSFLEAISKCLGSDSXELVRVCLTTVAWLSSALSSLSDAEFQLSAFSALIS 1080

Query: 1370 RLKEILENGDQVEHRVLASLALLNFSRISECRVLMRTIGEEIMVPLQSLAVVTWTAKQLY 1549
            RL++ LEN +Q+EH++LAS +LL+FS+I ECRVL+ TI EEI+VPL+SL  VTWTAK LY
Sbjct: 1081 RLRDNLENSEQIEHKILASASLLSFSKIPECRVLLMTIAEEIVVPLRSLVQVTWTAKHLY 1140

Query: 1550 TVISGE 1567
            T ISGE
Sbjct: 1141 TTISGE 1146


>ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|222841453|gb|EEE79000.1|
            predicted protein [Populus trichocarpa]
          Length = 1159

 Score =  519 bits (1337), Expect = e-145
 Identities = 271/517 (52%), Positives = 356/517 (68%)
 Frame = +2

Query: 17   NSASVQISHSMHDSFKLSNLSLHVEGQSVSDEYLEEESYFSNIPNDFICPLTGELFEEPV 196
            +S  + +S  +H   K  N S  +EG + S E  +E S F +IP DF+CPLT +LFE+PV
Sbjct: 646  DSGDLTVSDLLHPK-KAINASASIEGLNGSHESFDEGSIFESIPQDFVCPLTRQLFEDPV 704

Query: 197  TLETGQTFERTAIKEWFDKGKRTCPITGKNLESLGLPITNFVLKRVIDRWKSEHCGNLLA 376
            TLETGQTFER AI++WF++G RTCP+TGK LE   +P+TNF+LKR+ID WK E C +LL+
Sbjct: 705  TLETGQTFEREAIRKWFNQGNRTCPLTGKTLECPTIPLTNFILKRMIDSWKLERCNHLLS 764

Query: 377  FASKMQGTSSEHGFKSKDQRAVLILEKLLVGFRTEDRLTNAKHLISLGGLQFLILRFELG 556
            FAS++   S  +  + +++ A+ ILEKLL     E+RLTNAKHLISLG L+FLI RFE G
Sbjct: 765  FASQIFKNSEAYDSRQRNEDALFILEKLLASSSREERLTNAKHLISLGVLEFLIKRFEFG 824

Query: 557  NLEEKSRILVLLSCCIEADGDCRNYIAKNINKTCLLELLHNKQVKSRGNAVMLLMELICL 736
            +LEEK+ +  LLSCCIEA+  CRN+IA  I+K CL ELLH  Q KS  N V LL+EL+CL
Sbjct: 825  SLEEKTLVAALLSCCIEAESSCRNHIAIKIDKQCLFELLHGNQSKSARNVVGLLIELVCL 884

Query: 737  CRRTEITSFLSSMQKDEIMNTMHVLLVYLQSSPPDQRPXXXXXXXXXXXXXEQRKYSIYR 916
             RR  +T F+S +  + I++ M +LLVYLQSSP ++ P             E RKYSIYR
Sbjct: 885  SRRKGVTQFISGLPSETIVHAMDILLVYLQSSPAEE-PLVAVLILHLDLLVEPRKYSIYR 943

Query: 917  EEAVDSIAVALECSLTDEKVRVLCCRALLILGGHISFSGEVVTENWLLRHAGFYDGCNIN 1096
            +EAVD+I++ALE SLTDEKVR   CRAL +LGG  S SG   TE+W+L+ AGF     +N
Sbjct: 944  KEAVDAISMALESSLTDEKVREQSCRALNVLGGIFSASGNSSTESWILKQAGFDKNHEVN 1003

Query: 1097 YVEKVEENFQIDETILLTEEEMAIEDWWKKLAASLLGNGRKSFLEIISKCLGCEDSSLVR 1276
                 E+N  +D+ +   +EE + E+W + L+ SLL NG+ S LE ISKCL      LVR
Sbjct: 1004 ---SREDNLLLDDPLSPEDEEESSEEWLRNLSESLLANGKMSILETISKCLSSGILDLVR 1060

Query: 1277 TCLVTVAWMSRALTKMSDAEFQLSAFTALIPRLKEILENGDQVEHRVLASLALLNFSRIS 1456
             CL T+AW+S  ++ + D+E QL  F  LI  LKEILE+ +Q+EH+VLAS++LLN S+  
Sbjct: 1061 ACLTTIAWLSCGISLLPDSELQLFGFPTLISGLKEILEDDEQIEHQVLASMSLLNLSKNP 1120

Query: 1457 ECRVLMRTIGEEIMVPLQSLAVVTWTAKQLYTVISGE 1567
            EC  L+  I EEI VPLQSLA VTWTAK+L+ +ISGE
Sbjct: 1121 ECGSLLMIIAEEISVPLQSLAEVTWTAKELHAIISGE 1157


>ref|XP_003552751.1| PREDICTED: uncharacterized protein LOC100820501 [Glycine max]
          Length = 1089

 Score =  435 bits (1118), Expect = e-119
 Identities = 231/485 (47%), Positives = 316/485 (65%), Gaps = 1/485 (0%)
 Frame = +2

Query: 122  EESYFSNIPNDFICPLTGELFEEPVTLETGQTFERTAIKEWFDKGKRTCPITGKNLESLG 301
            E  YF +IP++FICPLTG LFEEPVTLETGQTFER AIK WF+KG RTCP+TG  LE + 
Sbjct: 606  EGPYFPSIPHEFICPLTGNLFEEPVTLETGQTFEREAIKAWFEKGNRTCPVTGNTLECVT 665

Query: 302  LPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGFKSKDQRAVLILEKLLVGFRTE 481
            +P TN +LKR+ID WKSE    L+   S+      E   K +D+ AV  LE L    + E
Sbjct: 666  MPFTNLILKRLIDTWKSELFDYLIDLPSQTVENPEELKLKKRDEAAVFKLESLFSSLKEE 725

Query: 482  DRLTNAKHLISLGGLQFLILRFELGNLEEKSRILVLLSCCIEADGDCRNYIAKNINKTCL 661
            D+ T AKHLISLG L FL  RFE GN+EEKS ++ LL  CI+ D  C   IA ++NK CL
Sbjct: 726  DKSTYAKHLISLGFLPFLFRRFEQGNVEEKSHVMSLLLNCIQVDSGCIYQIATSVNKKCL 785

Query: 662  LELLHNKQVKSRGNAVMLLMELICLCRRTEITSFLSSMQKDEIMNTMHVLLVYLQSSPPD 841
            LELLH+K+     NA++ L E++ + RR ++TSF+S +  +++ N MH+LL+YL+ S P 
Sbjct: 786  LELLHSKKATPTTNAILFLTEILSMKRRKDVTSFISGLAGEKVFNIMHILLMYLKKSSPF 845

Query: 842  QRPXXXXXXXXXXXXXEQRKYSIYREEAVDSIAVALECSLTDEKVRVLCCRALLILGGHI 1021
            ++P             E +K+SIYRE AV++IA AL+ SL DEK R  CCRAL+IL  H 
Sbjct: 846  EKPLIAVLLLHFDLLVEPQKFSIYREVAVNAIAEALDASLNDEKGREKCCRALVILCSHF 905

Query: 1022 SFSGEVVTENWLLRHAGF-YDGCNINYVEKVEENFQIDETILLTEEEMAIEDWWKKLAAS 1198
            S +G++ T+  +L+ AG+  D   +      EE  ++   I    EE   E+  KKL  S
Sbjct: 906  SSTGKIPTKTSILKQAGYNNDSLEVKPPGHEEEGQRLYVAISSEGEEKRGEELLKKLLES 965

Query: 1199 LLGNGRKSFLEIISKCLGCEDSSLVRTCLVTVAWMSRALTKMSDAEFQLSAFTALIPRLK 1378
            L+G+G   FL+ IS+CL  +   LVR CL+TV W+S +L+ +  A   L AF ++I +LK
Sbjct: 966  LIGDGESPFLKNISRCLDSKHLDLVRACLITVTWLSSSLSMLFSAGLHLPAFLSIISQLK 1025

Query: 1379 EILENGDQVEHRVLASLALLNFSRISECRVLMRTIGEEIMVPLQSLAVVTWTAKQLYTVI 1558
             ILENG ++E + LASL+LLNFS+ISEC+ L++T+ E+I   L  L  VTWTAKQL+ ++
Sbjct: 1026 GILENG-ELELKTLASLSLLNFSKISECKTLLKTMAEDIGPLLHELDDVTWTAKQLHAIV 1084

Query: 1559 SGEHV 1573
            S E++
Sbjct: 1085 SRENL 1089


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