BLASTX nr result

ID: Coptis25_contig00025236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025236
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264808.1| PREDICTED: uncharacterized protein LOC100267...   140   4e-31
emb|CBI18099.3| unnamed protein product [Vitis vinifera]              137   2e-30
ref|XP_002323633.1| predicted protein [Populus trichocarpa] gi|2...   115   8e-24
ref|XP_002526689.1| conserved hypothetical protein [Ricinus comm...    93   7e-17
ref|XP_002870905.1| predicted protein [Arabidopsis lyrata subsp....    87   5e-15

>ref|XP_002264808.1| PREDICTED: uncharacterized protein LOC100267149 [Vitis vinifera]
          Length = 664

 Score =  140 bits (352), Expect = 4e-31
 Identities = 102/273 (37%), Positives = 150/273 (54%), Gaps = 17/273 (6%)
 Frame = +1

Query: 1   RLQCEPLLEPQFKPIIAENYYTSSRFCLDIDRAQASALISLFASSPVIGGA------PKW 162
           RLQC+PL E QF+PIIA+NYY+ S F  ++D AQAS LISL +S  V   A        W
Sbjct: 120 RLQCQPLPEEQFRPIIADNYYSQSHFWFELDHAQASKLISLLSSRAVAPSASVPQNSAAW 179

Query: 163 ------IPKLALNLDPSSSTPLVSKSYNTSLDQSDLK-QRFGVTPIYEESQIH-ETHGDK 318
                 +P      +   S P  SK  +   DQ D K     V P  +ES +  E   DK
Sbjct: 180 RTLFRPLPLCNKKEEGEDSKP-PSKIDSAHSDQLDRKLGSSDVAPCLDESNLPLEASSDK 238

Query: 319 EQVENEEQ-LIYLKLEKLALERKHTSSSPLDHVTDVAVPCNTSTENLEDGSAQERVSGAA 495
           + VEN+E+ LI LKL++L L R++  SS   +V D AV    +  +L+D    +      
Sbjct: 239 QVVENDEKGLILLKLQELVLNREYKDSSSSSYVEDSAV---VNDSHLDDKGLVKEQMVLE 295

Query: 496 DKYEET--STSDLQLVIDQLEQEIKEFKDFSQEQLKKMSMLEKKMGDTDLELHKLKDRVE 669
           D+ E++  S+SD   VI QL +E  E K F  E +++MS +E+++ D + E+ +LK+   
Sbjct: 296 DRNEDSPVSSSDFHPVIAQLIRE--ELKGFKAEYIQRMSYMEQRLADAEKEIQQLKEHCM 353

Query: 670 LLESQLKISTTCVNETVAEPFDELRLSGEELIF 768
           +LES    S + V++TV E FDE+ +  ++LIF
Sbjct: 354 MLESICSPSMSLVDQTVNESFDEMNMDPDDLIF 386


>emb|CBI18099.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  137 bits (346), Expect = 2e-30
 Identities = 96/262 (36%), Positives = 145/262 (55%), Gaps = 6/262 (2%)
 Frame = +1

Query: 1   RLQCEPLLEPQFKPIIAENYYTSSRFCLDIDRAQASALISLFASSPVIGGAPKWIPKLAL 180
           RLQC+PL E QF+PIIA+NYY+ S F  ++D AQAS LISL +S  V             
Sbjct: 132 RLQCQPLPEEQFRPIIADNYYSQSHFWFELDHAQASKLISLLSSRAVA------------ 179

Query: 181 NLDPSSSTPLVSKSYNTSLDQSDLKQRFGVTPIYEESQIH---ETHGDKEQVENEEQ-LI 348
              PS+S P  S ++ T      L  +       EE + +   E   DK+ VEN+E+ LI
Sbjct: 180 ---PSASVPQNSAAWRTLFRPLPLCNK------KEEDESNLPLEASSDKQVVENDEKGLI 230

Query: 349 YLKLEKLALERKHTSSSPLDHVTDVAVPCNTSTENLEDGSAQERVSGAADKYEET--STS 522
            LKL++L L R++  SS   +V D AV    +  +L+D    +      D+ E++  S+S
Sbjct: 231 LLKLQELVLNREYKDSSSSSYVEDSAV---VNDSHLDDKGLVKEQMVLEDRNEDSPVSSS 287

Query: 523 DLQLVIDQLEQEIKEFKDFSQEQLKKMSMLEKKMGDTDLELHKLKDRVELLESQLKISTT 702
           D   VI QL +E  E K F  E +++MS +E+++ D + E+ +LK+   +LES    S +
Sbjct: 288 DFHPVIAQLIRE--ELKGFKAEYIQRMSYMEQRLADAEKEIQQLKEHCMMLESICSPSMS 345

Query: 703 CVNETVAEPFDELRLSGEELIF 768
            V++TV E FDE+ +  ++LIF
Sbjct: 346 LVDQTVNESFDEMNMDPDDLIF 367


>ref|XP_002323633.1| predicted protein [Populus trichocarpa] gi|222868263|gb|EEF05394.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score =  115 bits (289), Expect = 8e-24
 Identities = 84/268 (31%), Positives = 135/268 (50%), Gaps = 13/268 (4%)
 Frame = +1

Query: 1   RLQCEPLLEPQFKPIIAENYYTSSRFCLDIDRAQASALISLFASSPVIGGA---PKWIPK 171
           RLQC+PL E QFKPIIA+NYY  + F  ++D  Q S L+SL AS  V  G     + I K
Sbjct: 114 RLQCQPLREEQFKPIIADNYYNHNHFWFELDHVQTSKLMSLLASLAVSPGTCVLTQKIEK 173

Query: 172 LALNLDPSSSTPLVSKSYNTSLDQSDLKQRFGVTPIYEESQIHETHGDKEQV-------- 327
                 P   +    +    +L  S++     ++   + + I  +  D + V        
Sbjct: 174 WRNMFQPGPLSKSREEDEGDNLPASEIDHTDNLSTKSDSTHIASSDVDNQPVKDQLGVTA 233

Query: 328 --ENEEQLIYLKLEKLALERKHTSSSPLDHVTDVAVPCNTSTENLEDGSAQERVSGAADK 501
             + E++LI+ KL++LAL  +  +SS  D   D + P +    +LE+ ++ E   G+ +K
Sbjct: 234 VEQEEKELIFKKLQELALRSEPQASSVRDGTED-SPPLHDM--HLEEKASAEAQMGSEEK 290

Query: 502 YEETSTSDLQLVIDQLEQEIKEFKDFSQEQLKKMSMLEKKMGDTDLELHKLKDRVELLES 681
            +    +  Q  I QL + ++E K F  EQ  KM  LE+K+ + + ++ +LKDR  +LES
Sbjct: 291 NDVNPCTFCQSTIAQLAKGMEELKAFRTEQTLKMGYLEQKLVEAEEQIQQLKDRCMMLES 350

Query: 682 QLKISTTCVNETVAEPFDELRLSGEELI 765
               S   ++ETV   FDE +L   + I
Sbjct: 351 MSNPSKADIDETVNNLFDEEQLDPTDAI 378


>ref|XP_002526689.1| conserved hypothetical protein [Ricinus communis]
           gi|223533989|gb|EEF35711.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 665

 Score = 92.8 bits (229), Expect = 7e-17
 Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 14/270 (5%)
 Frame = +1

Query: 1   RLQCEPLLEPQFKPIIAENYYTSSRFCLDIDRAQASALISLFASSPVIGG--APKWIPKL 174
           RLQC PL E +FKPIIA+NYY    F  ++D AQ S L+SLFASSPV  G  AP+   K 
Sbjct: 108 RLQCHPLSEEKFKPIIADNYYRYHHFWFELDHAQTSKLMSLFASSPVAPGTSAPENTAKW 167

Query: 175 ALNLDPSSSTPLVSKSYNTSLDQSDLKQRFGVTPIYEESQIHETHGDKEQVEN------- 333
                P S +    + Y     + +      +  + + S +    G  + +EN       
Sbjct: 168 RTIYQPISLSERRDEGYKPLASEVENHTSCSLNFMNDASSL---DGKDKLLENQLNTNIV 224

Query: 334 ---EEQLIYLKLEKLALERKHTSSSPLDHVTDVAVPCNTSTENLEDGSAQERVSGAADKY 504
              E+ L   +L+ LA   +H  SS  D V       +   E  E+GSA+E++ G  +K 
Sbjct: 225 EQVEKDLTLQQLQGLAPNHEHKGSSLRDCVQGSTAINDMGVE--ENGSAEEQM-GLGEKN 281

Query: 505 EE--TSTSDLQLVIDQLEQEIKEFKDFSQEQLKKMSMLEKKMGDTDLELHKLKDRVELLE 678
           E+   ++ D Q +I Q+ ++   F            +L     + + ++ +LK+R  +LE
Sbjct: 282 EKPYCASFDCQSIIAQVLEDCCSF----------FFLLVAYQVEAEEQIQQLKNRCMMLE 331

Query: 679 SQLKISTTCVNETVAEPFDELRLSGEELIF 768
           S   +S T +++T ++ F++L L   + I+
Sbjct: 332 SMSNLSFTEISDTASDSFEKLNLDPTKSIY 361


>ref|XP_002870905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316742|gb|EFH47164.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 621

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 18/245 (7%)
 Frame = +1

Query: 1   RLQCEPLLEPQFKPIIAENYYTSSRFCLDIDRAQASALISLFASSPVIGGAPKWIPKL-- 174
           RLQCEPL E +FKP IA+NYY+S  F  ++D  Q S L  L  S  V    P   P    
Sbjct: 71  RLQCEPLSEEKFKPAIADNYYSSHHFWFELDHFQTSKLTCLLTSFAVKPKPPMNTPNTRQ 130

Query: 175 -------------ALNLDPSSSTPLVSKSYNTSLDQSDLKQRFGVTPIYEESQIHETHGD 315
                        +  + PS + P+ S     S  +          P + E+  H    +
Sbjct: 131 IFRLISSSEKKENSDEVKPSENEPVGSLEVALSSGRESESSAAASYPGFSEN--HPDVQN 188

Query: 316 KEQVENEEQLIYLKLEKLAL-ERKHTSSSPLDHVTDVAVPCNTSTENLEDGSAQERVSGA 492
            +Q+E +   +  KL+ L+    +H  +S  + V    +P     +NLED    E  + +
Sbjct: 189 PKQIEKD--YVLEKLKDLSFGHDEHGDNSLTETVEQANIP---PCKNLEDRDTLEEETCS 243

Query: 493 ADKYEETS--TSDLQLVIDQLEQEIKEFKDFSQEQLKKMSMLEKKMGDTDLELHKLKDRV 666
             K +++S  +S L   I QL  E+KE + +  E   K+  LE+K+ +   E+++L++R 
Sbjct: 244 EGKKDDSSLVSSRLPHTISQLMHEVKELRAYGLENSTKICYLEEKLDEAHKEIYRLRERC 303

Query: 667 ELLES 681
            +LES
Sbjct: 304 NMLES 308


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