BLASTX nr result

ID: Coptis25_contig00025232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025232
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554384.1| PREDICTED: translin-like [Glycine max]            201   7e-50
ref|XP_002326362.1| predicted protein [Populus trichocarpa] gi|2...   197   6e-49
gb|AFK45825.1| unknown [Lotus japonicus]                              196   1e-48
ref|XP_002519514.1| translin, putative [Ricinus communis] gi|223...   196   1e-48
ref|XP_003625667.1| Translin-like protein [Medicago truncatula] ...   194   8e-48

>ref|XP_003554384.1| PREDICTED: translin-like [Glycine max]
          Length = 295

 Score =  201 bits (510), Expect = 7e-50
 Identities = 96/106 (90%), Positives = 99/106 (93%)
 Frame = -1

Query: 520 EAEEKLGLGSSEFNLDVEDYLVGICFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAA 341
           EAEEKLGL SSEF LDVEDYL+G+CFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAA
Sbjct: 176 EAEEKLGLNSSEFGLDVEDYLIGVCFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAA 235

Query: 340 FRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLTTNDNSTGD 203
           FRMLNLRNDFLRKKFDGMKYDLR+VEEVYYDVKIRGLT N    GD
Sbjct: 236 FRMLNLRNDFLRKKFDGMKYDLRKVEEVYYDVKIRGLTPNGEPVGD 281


>ref|XP_002326362.1| predicted protein [Populus trichocarpa] gi|222833555|gb|EEE72032.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  197 bits (502), Expect = 6e-49
 Identities = 92/108 (85%), Positives = 101/108 (93%)
 Frame = -1

Query: 520 EAEEKLGLGSSEFNLDVEDYLVGICFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAA 341
           EA+EKLGL S EF LD+EDYL+G+CFMSNE+PRYVVNQVTAGDYDCPRKVLKF+TDLHAA
Sbjct: 126 EAQEKLGLNSLEFGLDIEDYLIGVCFMSNEMPRYVVNQVTAGDYDCPRKVLKFMTDLHAA 185

Query: 340 FRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLTTNDNSTGDKG 197
           FRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLT   +S G++G
Sbjct: 186 FRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLTATGDSNGNQG 233


>gb|AFK45825.1| unknown [Lotus japonicus]
          Length = 243

 Score =  196 bits (499), Expect = 1e-48
 Identities = 92/110 (83%), Positives = 102/110 (92%)
 Frame = -1

Query: 520 EAEEKLGLGSSEFNLDVEDYLVGICFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAA 341
           +A+EKLGL   EF+LD+EDYLVG+CFMSNELPRYVVNQVTAGDYDC RKVLKFLTDLHAA
Sbjct: 133 DAQEKLGLNGPEFSLDIEDYLVGVCFMSNELPRYVVNQVTAGDYDCSRKVLKFLTDLHAA 192

Query: 340 FRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLTTNDNSTGDKGTQ 191
           FRMLNLRNDFLRKKFDGMKYDLR+VEEVYYDVKIRGL++N  S GD+G +
Sbjct: 193 FRMLNLRNDFLRKKFDGMKYDLRKVEEVYYDVKIRGLSSNGESVGDQGIE 242


>ref|XP_002519514.1| translin, putative [Ricinus communis] gi|223541377|gb|EEF42928.1|
           translin, putative [Ricinus communis]
          Length = 299

 Score =  196 bits (499), Expect = 1e-48
 Identities = 93/107 (86%), Positives = 100/107 (93%)
 Frame = -1

Query: 520 EAEEKLGLGSSEFNLDVEDYLVGICFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAA 341
           EAEEKLGL SSEF LD+EDYL+GICFMSNE+PRYVVN+VTAGDYDCPRKVLKFLTDLHAA
Sbjct: 187 EAEEKLGLNSSEFGLDIEDYLIGICFMSNEMPRYVVNRVTAGDYDCPRKVLKFLTDLHAA 246

Query: 340 FRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLTTNDNSTGDK 200
           FRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGL +N +   D+
Sbjct: 247 FRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLASNGDLVADQ 293


>ref|XP_003625667.1| Translin-like protein [Medicago truncatula]
           gi|355500682|gb|AES81885.1| Translin-like protein
           [Medicago truncatula]
          Length = 237

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/112 (82%), Positives = 99/112 (88%)
 Frame = -1

Query: 520 EAEEKLGLGSSEFNLDVEDYLVGICFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAA 341
           EAEE LGL   EFNLDVEDYLVG+CFMSNELPRYVVNQVTAGDYDCPR VLKFLT+LHAA
Sbjct: 125 EAEEMLGLNGPEFNLDVEDYLVGVCFMSNELPRYVVNQVTAGDYDCPRNVLKFLTELHAA 184

Query: 340 FRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLTTNDNSTGDKGTQAE 185
           FRMLNLRND LR+KFDGMKYDLR+VEEVYYDVKIRGLT N  S  D+G + +
Sbjct: 185 FRMLNLRNDLLRRKFDGMKYDLRKVEEVYYDVKIRGLTPNGESVADQGIKGQ 236


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