BLASTX nr result

ID: Coptis25_contig00025227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025227
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158390.1| PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER...   317   3e-84
ref|XP_004147019.1| PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER...   317   3e-84
ref|XP_002305485.1| predicted protein [Populus trichocarpa] gi|2...   317   3e-84
ref|XP_003630928.1| Protein XAP5 CIRCADIAN TIMEKEEPER [Medicago ...   316   6e-84
ref|XP_002529246.1| Protein FAM50A, putative [Ricinus communis] ...   316   6e-84

>ref|XP_004158390.1| PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER-like [Cucumis sativus]
          Length = 335

 Score =  317 bits (812), Expect = 3e-84
 Identities = 148/157 (94%), Positives = 153/157 (97%)
 Frame = -2

Query: 904 KQWLLEQEQIRNEPLQITYSYWDGAGHRRVLQLRKGDTIGEFLRSVQQQLAPEFREIRTT 725
           +QWL EQEQIRNEPL+ITYSYWDGAGHRRV+Q RKGDTIGEFLR+VQQQLAPEFREIRTT
Sbjct: 179 RQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRAVQQQLAPEFREIRTT 238

Query: 724 SVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADARKEKDESHAG 545
           SVENLLYVKEDLIIPHQHSFYELI+NKARGKSGPLFHFDVHEDVRTIADA  EKDESHAG
Sbjct: 239 SVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAG 298

Query: 544 KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 434
           KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 299 KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 335


>ref|XP_004147019.1| PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER-like [Cucumis sativus]
          Length = 335

 Score =  317 bits (812), Expect = 3e-84
 Identities = 148/157 (94%), Positives = 153/157 (97%)
 Frame = -2

Query: 904 KQWLLEQEQIRNEPLQITYSYWDGAGHRRVLQLRKGDTIGEFLRSVQQQLAPEFREIRTT 725
           +QWL EQEQIRNEPL+ITYSYWDGAGHRRV+Q RKGDTIGEFLR+VQQQLAPEFREIRTT
Sbjct: 179 RQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRAVQQQLAPEFREIRTT 238

Query: 724 SVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADARKEKDESHAG 545
           SVENLLYVKEDLIIPHQHSFYELI+NKARGKSGPLFHFDVHEDVRTIADA  EKDESHAG
Sbjct: 239 SVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAG 298

Query: 544 KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 434
           KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 299 KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 335


>ref|XP_002305485.1| predicted protein [Populus trichocarpa] gi|222848449|gb|EEE85996.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  317 bits (811), Expect = 3e-84
 Identities = 148/157 (94%), Positives = 154/157 (98%)
 Frame = -2

Query: 904 KQWLLEQEQIRNEPLQITYSYWDGAGHRRVLQLRKGDTIGEFLRSVQQQLAPEFREIRTT 725
           KQWL EQEQIRNEPL+ITYSYWDGAGHRRV+Q+RKGDTIGEFLR+VQQQLAPEFREIRTT
Sbjct: 180 KQWLREQEQIRNEPLEITYSYWDGAGHRRVIQVRKGDTIGEFLRAVQQQLAPEFREIRTT 239

Query: 724 SVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADARKEKDESHAG 545
           SVENLLYVKEDLIIPHQHSFY+LIINKARGKSGPLFHFDVHEDVRTIADA  EKDESHAG
Sbjct: 240 SVENLLYVKEDLIIPHQHSFYDLIINKARGKSGPLFHFDVHEDVRTIADATIEKDESHAG 299

Query: 544 KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 434
           KVVERHWYEKNKHIFPASRWEIYDPT+KWERYTIHGD
Sbjct: 300 KVVERHWYEKNKHIFPASRWEIYDPTQKWERYTIHGD 336


>ref|XP_003630928.1| Protein XAP5 CIRCADIAN TIMEKEEPER [Medicago truncatula]
           gi|355524950|gb|AET05404.1| Protein XAP5 CIRCADIAN
           TIMEKEEPER [Medicago truncatula]
          Length = 339

 Score =  316 bits (809), Expect = 6e-84
 Identities = 146/157 (92%), Positives = 153/157 (97%)
 Frame = -2

Query: 904 KQWLLEQEQIRNEPLQITYSYWDGAGHRRVLQLRKGDTIGEFLRSVQQQLAPEFREIRTT 725
           KQWL EQ+QIRNEPLQITYSYWDG GHRRV+Q+RKGDTIGEFLR++QQQLAPEFREIRTT
Sbjct: 183 KQWLREQDQIRNEPLQITYSYWDGTGHRRVIQVRKGDTIGEFLRAIQQQLAPEFREIRTT 242

Query: 724 SVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADARKEKDESHAG 545
           SVENLLYVKEDLIIPHQHSFY+LI+NKARGKSGPLFHFDVHEDVRTIADA  EKDESHAG
Sbjct: 243 SVENLLYVKEDLIIPHQHSFYDLIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAG 302

Query: 544 KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 434
           KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 303 KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 339


>ref|XP_002529246.1| Protein FAM50A, putative [Ricinus communis]
           gi|223531282|gb|EEF33124.1| Protein FAM50A, putative
           [Ricinus communis]
          Length = 334

 Score =  316 bits (809), Expect = 6e-84
 Identities = 147/157 (93%), Positives = 154/157 (98%)
 Frame = -2

Query: 904 KQWLLEQEQIRNEPLQITYSYWDGAGHRRVLQLRKGDTIGEFLRSVQQQLAPEFREIRTT 725
           KQWL EQEQIRNEPL+ITYSYWDGAGHRRV+Q+RKGD+IGEFLR+VQQQLAPEFREIRTT
Sbjct: 178 KQWLREQEQIRNEPLEITYSYWDGAGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREIRTT 237

Query: 724 SVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADARKEKDESHAG 545
           SVENLLYVKEDLIIPHQHSFYELI+NKARGKSGPLFHFDVHEDVRTIADA  EKDESHAG
Sbjct: 238 SVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAG 297

Query: 544 KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 434
           KVVERHWYEKNKHIFPASRWEIYDP+KKWERYTIHGD
Sbjct: 298 KVVERHWYEKNKHIFPASRWEIYDPSKKWERYTIHGD 334


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