BLASTX nr result

ID: Coptis25_contig00025221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025221
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15206.3| unnamed protein product [Vitis vinifera]               62   9e-08
emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]    62   9e-08
ref|XP_002321528.1| predicted protein [Populus trichocarpa] gi|2...    58   1e-06

>emb|CBI15206.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +3

Query: 3   YVLLSHMYANEGRWNDAFRTRQAMRGRQVQKPKPGNSLVDPQPAMMMMQESS 158
           YVLL++MYA+ G+WN   R R++M  R VQKPKPGNS +  QP+M +  ES+
Sbjct: 359 YVLLANMYASAGQWNKVVRVRKSMHIRGVQKPKPGNSYIGFQPSMRLEMEST 410


>emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
          Length = 516

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +3

Query: 3   YVLLSHMYANEGRWNDAFRTRQAMRGRQVQKPKPGNSLVDPQPAMMMMQESS 158
           YVLL++MYA+ G+WN   R R++M  R VQKPKPGNS +  QP+M +  ES+
Sbjct: 459 YVLLANMYASAGQWNKVXRVRKSMHIRGVQKPKPGNSYIGFQPSMRLEMEST 510


>ref|XP_002321528.1| predicted protein [Populus trichocarpa] gi|222868524|gb|EEF05655.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +3

Query: 3   YVLLSHMYANEGRWNDAFRTRQAMRGRQVQKPKPGNSLVDPQPAM 137
           YVLL++ YA+ GRWN+A R R+ M  R VQKP+PGNS+V   P++
Sbjct: 396 YVLLANTYASAGRWNEAMRVRKTMHKRGVQKPEPGNSVVGRHPSL 440


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