BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025220
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...    74   2e-11
emb|CAA16968.1| hypothetical protein [Arabidopsis thaliana] gi|7...    72   6e-11
emb|CAN78853.1| hypothetical protein VITISV_039252 [Vitis vinifera]    71   1e-10
emb|CAN70849.1| hypothetical protein VITISV_039359 [Vitis vinifera]    71   1e-10
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                 70   1e-10

>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/95 (37%), Positives = 59/95 (62%)
 Frame = -1

Query: 287 IDPWDKRNGWRVFADGSAIDACSGIGVVLVTLDNGRIEQIMKLGFAVFSNEAEYEVVIAG 108
           +D  +    W +  DGS+    SG+G+ L +     IEQ ++LGF   +NE+EYE +IAG
Sbjct: 634 LDGTNSNKKWLLHVDGSSNRQGSGVGIQLTSPTGEVIEQSLQLGFNASNNESEYEALIAG 693

Query: 107 LRMAEDLGVKELTIYSDSNLVVCQANGWFAARCPR 3
           +++A++ G++E+  YSDS LV  Q +G + A+  R
Sbjct: 694 IKLAQEKGIREIHAYSDSQLVTSQFHGEYEAKDER 728


>emb|CAA16968.1| hypothetical protein [Arabidopsis thaliana]
           gi|7270126|emb|CAB79940.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 452

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/97 (40%), Positives = 62/97 (63%)
 Frame = -1

Query: 293 DLIDPWDKRNGWRVFADGSAIDACSGIGVVLVTLDNGRIEQIMKLGFAVFSNEAEYEVVI 114
           D+ID     N W +++DGS+    S +G++L +     +EQ ++L F   +NEAEYE ++
Sbjct: 199 DVIDVIPDEN-WILYSDGSSSLQGSSLGILLQSPTREILEQSLRLQFKASNNEAEYEALL 257

Query: 113 AGLRMAEDLGVKELTIYSDSNLVVCQANGWFAARCPR 3
           AGLR+A+ LG K++  +SDS LVV + +G F A+  R
Sbjct: 258 AGLRLAKGLGAKQIKAFSDSQLVVSRFSGEFEAKNER 294


>emb|CAN78853.1| hypothetical protein VITISV_039252 [Vitis vinifera]
          Length = 995

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/90 (40%), Positives = 57/90 (63%)
 Frame = -1

Query: 272 KRNGWRVFADGSAIDACSGIGVVLVTLDNGRIEQIMKLGFAVFSNEAEYEVVIAGLRMAE 93
           K+  W +  DG++  + SG+G++L +     +EQ ++LGF+  +NEAEYE +++GL +A 
Sbjct: 450 KKEWWTLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLAL 509

Query: 92  DLGVKELTIYSDSNLVVCQANGWFAARCPR 3
            L V +L IYSDS LVV Q    + A+  R
Sbjct: 510 ALSVSKLRIYSDSQLVVRQVQKEYEAKDAR 539


>emb|CAN70849.1| hypothetical protein VITISV_039359 [Vitis vinifera]
          Length = 993

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/91 (39%), Positives = 57/91 (62%)
 Frame = -1

Query: 275 DKRNGWRVFADGSAIDACSGIGVVLVTLDNGRIEQIMKLGFAVFSNEAEYEVVIAGLRMA 96
           DK+  W +  DG++  + SG+G++L +     +EQ ++LGF+  +NEAEYE +++GL +A
Sbjct: 432 DKQEWWTLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLA 491

Query: 95  EDLGVKELTIYSDSNLVVCQANGWFAARCPR 3
             L V +L IYSDS LVV      + A+  R
Sbjct: 492 LALSVSKLRIYSDSQLVVRHVQKEYEAKNAR 522


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/86 (43%), Positives = 53/86 (61%)
 Frame = -1

Query: 260 WRVFADGSAIDACSGIGVVLVTLDNGRIEQIMKLGFAVFSNEAEYEVVIAGLRMAEDLGV 81
           W V  DG++    +GIGVVL+T +   +E+ ++LGF   +NEAEYE ++AG +M   LG 
Sbjct: 534 WEVCTDGASNRKGAGIGVVLITPEKLVMEKSLRLGFIATNNEAEYEALLAGAQMVRHLGG 593

Query: 80  KELTIYSDSNLVVCQANGWFAARCPR 3
           + + +Y DS LV  Q NG F  R  R
Sbjct: 594 EVVELYCDSRLVFGQINGEFEVRDER 619