BLASTX nr result

ID: Coptis25_contig00025218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025218
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320849.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24
ref|XP_002280531.1| PREDICTED: uncharacterized protein LOC100261...   115   7e-24
gb|AFX67023.1| hypothetical protein [Solanum tuberosum]               112   8e-23
ref|XP_002532659.1| conserved hypothetical protein [Ricinus comm...   112   8e-23
gb|AEW43293.1| hypothetical protein [Hevea brasiliensis]              112   1e-22

>ref|XP_002320849.1| predicted protein [Populus trichocarpa] gi|222861622|gb|EEE99164.1|
           predicted protein [Populus trichocarpa]
          Length = 79

 Score =  117 bits (293), Expect = 2e-24
 Identities = 55/82 (67%), Positives = 64/82 (78%)
 Frame = -3

Query: 604 IESIVRSSTTIGGVSGNLNGPHPRERCRYFMMPLHYPRHTKADYECMPEWKLDCLLAAYG 425
           +ES+ R ++ IG      NG H +ERC  F MPLHYPRHT+A+YE MPEWKLDCLL  YG
Sbjct: 1   MESVARPTSNIGD---GPNGQHTKERCGSFQMPLHYPRHTRAEYETMPEWKLDCLLREYG 57

Query: 424 LPVTGDSVEQKRKFAMGAFLWS 359
           LP+TGD VEQKRK+AMGAFLWS
Sbjct: 58  LPITGD-VEQKRKYAMGAFLWS 78


>ref|XP_002280531.1| PREDICTED: uncharacterized protein LOC100261908 [Vitis vinifera]
           gi|297745397|emb|CBI40477.3| unnamed protein product
           [Vitis vinifera]
          Length = 80

 Score =  115 bits (289), Expect = 7e-24
 Identities = 56/81 (69%), Positives = 63/81 (77%)
 Frame = -3

Query: 604 IESIVRSSTTIGGVSGNLNGPHPRERCRYFMMPLHYPRHTKADYECMPEWKLDCLLAAYG 425
           +ES+ RS  T+G  S   NG   R+RC  F MPLHYPR+T+ADYE MPEWK+DCLLA YG
Sbjct: 1   MESVARSIPTVG--SAGANGLQGRDRCGQFQMPLHYPRYTQADYETMPEWKIDCLLAEYG 58

Query: 424 LPVTGDSVEQKRKFAMGAFLW 362
           LPVTG  VEQKRKFAMGAFLW
Sbjct: 59  LPVTG-GVEQKRKFAMGAFLW 78


>gb|AFX67023.1| hypothetical protein [Solanum tuberosum]
          Length = 86

 Score =  112 bits (280), Expect = 8e-23
 Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = -3

Query: 616 AGGGIESIVRSSTTIGGVSGNLNGPHPRERCRY-FMMPLHYPRHTKADYECMPEWKLDCL 440
           +GGG+ES+ R   T   V G +N  H  ERC Y F MPLHYPR+T+A+YE MPEWK+DCL
Sbjct: 2   SGGGMESMARP--TPPEVGGGINSQHDGERCGYGFHMPLHYPRYTRAEYEAMPEWKVDCL 59

Query: 439 LAAYGLPVTGDSVEQKRKFAMGAFLWS 359
           LA YGLP  GD V QKRKFAMGAFLW+
Sbjct: 60  LAQYGLPSNGD-VNQKRKFAMGAFLWT 85


>ref|XP_002532659.1| conserved hypothetical protein [Ricinus communis]
           gi|223527619|gb|EEF29732.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 79

 Score =  112 bits (280), Expect = 8e-23
 Identities = 50/83 (60%), Positives = 64/83 (77%)
 Frame = -3

Query: 604 IESIVRSSTTIGGVSGNLNGPHPRERCRYFMMPLHYPRHTKADYECMPEWKLDCLLAAYG 425
           +ES+ R +  +GG     NG H ++ C YF MP+HYPR+T+A+YE MPEW+LDCLL AYG
Sbjct: 1   MESVARPAANVGG---RPNGDHAKDLCGYFQMPVHYPRYTRAEYESMPEWQLDCLLKAYG 57

Query: 424 LPVTGDSVEQKRKFAMGAFLWSN 356
           LP+TGD V+ KRKFAMG FLWS+
Sbjct: 58  LPITGD-VDYKRKFAMGTFLWSH 79


>gb|AEW43293.1| hypothetical protein [Hevea brasiliensis]
          Length = 79

 Score =  112 bits (279), Expect = 1e-22
 Identities = 52/83 (62%), Positives = 62/83 (74%)
 Frame = -3

Query: 604 IESIVRSSTTIGGVSGNLNGPHPRERCRYFMMPLHYPRHTKADYECMPEWKLDCLLAAYG 425
           +ES+ R +  IGG     N  H ++RC YF MPLHYPR+T A+Y+ MPEWKLDCLL  YG
Sbjct: 1   MESVARPAENIGG---RPNSEHAKDRCGYFQMPLHYPRYTHAEYDTMPEWKLDCLLKEYG 57

Query: 424 LPVTGDSVEQKRKFAMGAFLWSN 356
           LP+TG +VE KRKFAMGAFLW N
Sbjct: 58  LPITG-NVEYKRKFAMGAFLWPN 79


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