BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025193
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21323.3| unnamed protein product [Vitis vinifera]              203   1e-50
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-50
ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-49
ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-49
ref|XP_002512901.1| pentatricopeptide repeat-containing protein,...   199   3e-49

>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  203 bits (516), Expect = 1e-50
 Identities = 104/158 (65%), Positives = 125/158 (79%)
 Frame = -2

Query: 477 STVGFGVFIGKFCRVCELDELLRLVEGVKRCVSMINGSVIAVLIIDGLCKVGRVHEASRV 298
           +++GFGVFI +FCR  EL   L L++ V +  S INGS+IA+LII GLC+V RV EA  +
Sbjct: 187 NSLGFGVFIWRFCRNAELGTTLSLLDEVIKHASEINGSIIALLIIHGLCQVSRVSEAFEL 246

Query: 297 LDELRSRDCKPDFMAYRIVAEAFRAEGEFVETEKVLKRKRKFGVAPRANDYREFLLNLIS 118
           L+ELRSR+ KPDFMAYRIV EAFR +G   E EKVLK+KRK GVAPR NDYREF+  LIS
Sbjct: 247 LEELRSREYKPDFMAYRIVTEAFRLKGSLAEVEKVLKKKRKLGVAPRENDYREFIFVLIS 306

Query: 117 EKRIQEAKELGQVIIEGNFAIEDDVLNVLIGSVSAIDP 4
           E+RI EAKELG+VII GNF I +DVLN L+GSVS+IDP
Sbjct: 307 ERRIPEAKELGEVIINGNFPIGNDVLNALVGSVSSIDP 344


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  203 bits (516), Expect = 1e-50
 Identities = 104/158 (65%), Positives = 125/158 (79%)
 Frame = -2

Query: 477 STVGFGVFIGKFCRVCELDELLRLVEGVKRCVSMINGSVIAVLIIDGLCKVGRVHEASRV 298
           +++GFGVFI +FCR  EL   L L++ V +  S INGS+IA+LII GLC+V RV EA  +
Sbjct: 187 NSLGFGVFIWRFCRNAELGTTLSLLDEVIKHASEINGSIIALLIIHGLCQVSRVSEAFEL 246

Query: 297 LDELRSRDCKPDFMAYRIVAEAFRAEGEFVETEKVLKRKRKFGVAPRANDYREFLLNLIS 118
           L+ELRSR+ KPDFMAYRIV EAFR +G   E EKVLK+KRK GVAPR NDYREF+  LIS
Sbjct: 247 LEELRSREYKPDFMAYRIVTEAFRLKGSLAEVEKVLKKKRKLGVAPRENDYREFIFVLIS 306

Query: 117 EKRIQEAKELGQVIIEGNFAIEDDVLNVLIGSVSAIDP 4
           E+RI EAKELG+VII GNF I +DVLN L+GSVS+IDP
Sbjct: 307 ERRIPEAKELGEVIINGNFPIGNDVLNALVGSVSSIDP 344


>ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|222869847|gb|EEF06978.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  199 bits (507), Expect = 1e-49
 Identities = 103/158 (65%), Positives = 124/158 (78%)
 Frame = -2

Query: 477 STVGFGVFIGKFCRVCELDELLRLVEGVKRCVSMINGSVIAVLIIDGLCKVGRVHEASRV 298
           ST+GFGVFI + CR  +L E+LRLV+ V+   S+INGSVIAVLI+ GLC+  R  EA R 
Sbjct: 187 STIGFGVFIWRLCRNGDLGEVLRLVDEVEGRNSLINGSVIAVLIVHGLCEGSRTSEALRA 246

Query: 297 LDELRSRDCKPDFMAYRIVAEAFRAEGEFVETEKVLKRKRKFGVAPRANDYREFLLNLIS 118
           L+ELR R  KPDF+AYR+VAEAFR+ G   +  +VLK KRK GVAPR+NDYREF+L LI+
Sbjct: 247 LNELRIRGWKPDFIAYRVVAEAFRSLGSVFDVNEVLKMKRKLGVAPRSNDYREFILGLIT 306

Query: 117 EKRIQEAKELGQVIIEGNFAIEDDVLNVLIGSVSAIDP 4
           E+RI EAKELG+VI  GNF +EDDVLN LIGSVS IDP
Sbjct: 307 ERRIYEAKELGEVIASGNFPMEDDVLNALIGSVSTIDP 344


>ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|222845900|gb|EEE83447.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  199 bits (507), Expect = 1e-49
 Identities = 103/158 (65%), Positives = 124/158 (78%)
 Frame = -2

Query: 477 STVGFGVFIGKFCRVCELDELLRLVEGVKRCVSMINGSVIAVLIIDGLCKVGRVHEASRV 298
           ST+GFGVFI + CR  +L E+LRLV+ V+   S+INGSVIAVLI+ GLC+  R  EA R 
Sbjct: 187 STIGFGVFIWRLCRNGDLGEVLRLVDEVEGRNSLINGSVIAVLIVHGLCEGSRTSEALRA 246

Query: 297 LDELRSRDCKPDFMAYRIVAEAFRAEGEFVETEKVLKRKRKFGVAPRANDYREFLLNLIS 118
           L+ELR R  KPDF+AYR+VAEAFR+ G   +  +VLK KRK GVAPR+NDYREF+L LI+
Sbjct: 247 LNELRIRGWKPDFIAYRVVAEAFRSLGSVFDVNEVLKMKRKLGVAPRSNDYREFILGLIT 306

Query: 117 EKRIQEAKELGQVIIEGNFAIEDDVLNVLIGSVSAIDP 4
           E+RI EAKELG+VI  GNF +EDDVLN LIGSVS IDP
Sbjct: 307 ERRIYEAKELGEVIASGNFPMEDDVLNALIGSVSTIDP 344


>ref|XP_002512901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547912|gb|EEF49404.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 655

 Score =  199 bits (505), Expect = 3e-49
 Identities = 99/158 (62%), Positives = 126/158 (79%)
 Frame = -2

Query: 477 STVGFGVFIGKFCRVCELDELLRLVEGVKRCVSMINGSVIAVLIIDGLCKVGRVHEASRV 298
           +TVGFGVFI +FCR   L ++L L++ VK   S+INGSVIAVL++ GLC+  RV+EA  V
Sbjct: 189 NTVGFGVFIWRFCRDANLSKVLNLLDQVKEGNSVINGSVIAVLVVHGLCQASRVNEALWV 248

Query: 297 LDELRSRDCKPDFMAYRIVAEAFRAEGEFVETEKVLKRKRKFGVAPRANDYREFLLNLIS 118
           L+ELR R+CKPDFMAYRIVAEAFR  G   +  KVLK KRK GVAPR+NDYR+F+L+LI+
Sbjct: 249 LNELRIRNCKPDFMAYRIVAEAFRLSGSSADINKVLKMKRKLGVAPRSNDYRDFILSLIA 308

Query: 117 EKRIQEAKELGQVIIEGNFAIEDDVLNVLIGSVSAIDP 4
           ++ + E KE+G+VI+ G+F IE DVLN LIGSVS+IDP
Sbjct: 309 KRLVLEVKEIGEVIVHGDFPIEVDVLNALIGSVSSIDP 346