BLASTX nr result

ID: Coptis25_contig00025189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025189
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272064.1| PREDICTED: oxygen-evolving enhancer protein ...   244   2e-62
gb|AAU90312.1| Putative oxygen evolving enhancer protein, identi...   233   4e-59
gb|AAW28572.1| Putative oxygen evolving enhancer protein 3, iden...   231   1e-58
ref|XP_003613863.1| Oxygen-evolving enhancer protein 3-2 [Medica...   224   1e-56
gb|ACJ86175.1| unknown [Medicago truncatula] gi|388516659|gb|AFK...   224   1e-56

>ref|XP_002272064.1| PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic
           [Vitis vinifera] gi|296086349|emb|CBI31938.3| unnamed
           protein product [Vitis vinifera]
          Length = 188

 Score =  244 bits (622), Expect = 2e-62
 Identities = 129/192 (67%), Positives = 148/192 (77%), Gaps = 3/192 (1%)
 Frame = +2

Query: 113 MYTITKPTLLCYHHITSSPCNK---FYRTKASSSCDENLRNRRNFLSVILTGSVALGLQS 283
           M + T PT L    +T++   +      T+AS S +E    RR  +S +L  S+AL    
Sbjct: 1   MSSFTSPTSLSCAQLTTAQHGRSPSLPATRASLSGEETPILRRRIVSTLLATSLAL---- 56

Query: 284 QVTPIALAENWGTRSFLKEHFFEPGLSPEDAVARIRQTAQGMHSIREMLETTSWRYVIFY 463
             TP+ALAENWGTRSFLKE FFEPGLSPEDAVARIRQTA+G+HSIR MLET SWRYVIFY
Sbjct: 57  HGTPLALAENWGTRSFLKERFFEPGLSPEDAVARIRQTAEGLHSIRHMLETMSWRYVIFY 116

Query: 464 IRLKSAYLNQDLKTAMTIMPESRKDSYVEKANELVDNMAELDYYVRTPKIYESYLYYEKT 643
           IRLKSAYL+QDLK AMT +PESR+ SY  KANELVDNMAE DYYVRTPK+YESYLYYEKT
Sbjct: 117 IRLKSAYLSQDLKNAMTTLPESRRRSYANKANELVDNMAEFDYYVRTPKVYESYLYYEKT 176

Query: 644 LKSLDDLVELLA 679
           LKS+DDLV +LA
Sbjct: 177 LKSIDDLVAMLA 188


>gb|AAU90312.1| Putative oxygen evolving enhancer protein, identical [Solanum
           demissum]
          Length = 193

 Score =  233 bits (593), Expect = 4e-59
 Identities = 119/195 (61%), Positives = 148/195 (75%), Gaps = 6/195 (3%)
 Frame = +2

Query: 113 MYTITKPTLLCYHHIT-----SSPCNKFYRTKAS-SSCDENLRNRRNFLSVILTGSVALG 274
           M T T PT L +  IT      + C    + +++ S+ +EN   RR  ++  L   + LG
Sbjct: 1   MTTFTNPTTLFHPKITITKTHHTQCKTLPKIQSNLSTNEENFSCRRKLIATFLATPLTLG 60

Query: 275 LQSQVTPIALAENWGTRSFLKEHFFEPGLSPEDAVARIRQTAQGMHSIREMLETTSWRYV 454
           LQ   TP+ALAENWG RSFL+EHFFEPGLSPEDAVARIRQTA G+HSI+EMLET SWRYV
Sbjct: 61  LQ--FTPLALAENWGVRSFLREHFFEPGLSPEDAVARIRQTADGLHSIKEMLETNSWRYV 118

Query: 455 IFYIRLKSAYLNQDLKTAMTIMPESRKDSYVEKANELVDNMAELDYYVRTPKIYESYLYY 634
           +FYIRLKSAYL QD+K A++ +PES K+SY++ ANEL DNMAE DYY+RTPK+YES ++Y
Sbjct: 119 LFYIRLKSAYLKQDVKNALSRVPESLKESYIKTANELTDNMAEFDYYIRTPKVYESRVFY 178

Query: 635 EKTLKSLDDLVELLA 679
           EKTLKS+D+LV LLA
Sbjct: 179 EKTLKSIDELVGLLA 193


>gb|AAW28572.1| Putative oxygen evolving enhancer protein 3, identical [Solanum
           demissum]
          Length = 193

 Score =  231 bits (589), Expect = 1e-58
 Identities = 118/195 (60%), Positives = 147/195 (75%), Gaps = 6/195 (3%)
 Frame = +2

Query: 113 MYTITKPTLLCYHHIT-----SSPCNKFYRTKAS-SSCDENLRNRRNFLSVILTGSVALG 274
           M T T PT L +  I       + C    + +++ S+ +EN   RR  ++  L   + LG
Sbjct: 1   MTTFTNPTTLFHPKIKITKTHHTQCKTLPKIQSNLSTNEENFTCRRKLIATFLATPLTLG 60

Query: 275 LQSQVTPIALAENWGTRSFLKEHFFEPGLSPEDAVARIRQTAQGMHSIREMLETTSWRYV 454
           L    TP+ALAENWG RSFL+EHFFEPGLSPEDAVARIRQTA G+HSI+EMLET SWRYV
Sbjct: 61  LP--FTPLALAENWGVRSFLREHFFEPGLSPEDAVARIRQTADGLHSIKEMLETNSWRYV 118

Query: 455 IFYIRLKSAYLNQDLKTAMTIMPESRKDSYVEKANELVDNMAELDYYVRTPKIYESYLYY 634
           +FYIRLKSAYL QD+K A++ +PESRK+SY++ ANEL DNMAE DYY+RTPK+YES ++Y
Sbjct: 119 LFYIRLKSAYLKQDMKNALSRVPESRKESYIKTANELTDNMAEFDYYIRTPKVYESRVFY 178

Query: 635 EKTLKSLDDLVELLA 679
           EKTLKS+D+LV LLA
Sbjct: 179 EKTLKSIDELVGLLA 193


>ref|XP_003613863.1| Oxygen-evolving enhancer protein 3-2 [Medicago truncatula]
           gi|355515198|gb|AES96821.1| Oxygen-evolving enhancer
           protein 3-2 [Medicago truncatula]
          Length = 261

 Score =  224 bits (572), Expect = 1e-56
 Identities = 114/195 (58%), Positives = 142/195 (72%), Gaps = 6/195 (3%)
 Frame = +2

Query: 113 MYTITKPTLLCYHHI------TSSPCNKFYRTKASSSCDENLRNRRNFLSVILTGSVALG 274
           M + T  T L + HI      TS+  N       SS   +N+ NRRN +S  L  S+   
Sbjct: 69  MSSFTHATTLLHAHIKTKHKNTSNNINNNVNNSLSSK--QNVTNRRNLVSTFLATSMVGV 126

Query: 275 LQSQVTPIALAENWGTRSFLKEHFFEPGLSPEDAVARIRQTAQGMHSIREMLETTSWRYV 454
           +    TP+ALA+NWGTRSF+KEHFF PGLSPEDAV RI+QTA+G+H++REMLET SWRYV
Sbjct: 127 VHVTTTPLALAQNWGTRSFMKEHFFMPGLSPEDAVLRIKQTAEGLHNLREMLETLSWRYV 186

Query: 455 IFYIRLKSAYLNQDLKTAMTIMPESRKDSYVEKANELVDNMAELDYYVRTPKIYESYLYY 634
           +FYIRLK  YL QDL+ A+T +PE+R+  YV+ ANELVDN+ E+D YVRTPK+YESYLYY
Sbjct: 187 MFYIRLKQNYLEQDLRNAITTLPENRRKEYVKTANELVDNLTEMDRYVRTPKVYESYLYY 246

Query: 635 EKTLKSLDDLVELLA 679
           EKTLKS+D+LV  LA
Sbjct: 247 EKTLKSIDELVAQLA 261


>gb|ACJ86175.1| unknown [Medicago truncatula] gi|388516659|gb|AFK46391.1| unknown
           [Medicago truncatula]
          Length = 193

 Score =  224 bits (572), Expect = 1e-56
 Identities = 114/195 (58%), Positives = 142/195 (72%), Gaps = 6/195 (3%)
 Frame = +2

Query: 113 MYTITKPTLLCYHHI------TSSPCNKFYRTKASSSCDENLRNRRNFLSVILTGSVALG 274
           M + T  T L + HI      TS+  N       SS   +N+ NRRN +S  L  S+   
Sbjct: 1   MSSFTHATTLLHAHIKTKHKNTSNNINNNVNNSLSSK--QNVTNRRNLVSTFLATSMVGV 58

Query: 275 LQSQVTPIALAENWGTRSFLKEHFFEPGLSPEDAVARIRQTAQGMHSIREMLETTSWRYV 454
           +    TP+ALA+NWGTRSF+KEHFF PGLSPEDAV RI+QTA+G+H++REMLET SWRYV
Sbjct: 59  VHVTTTPLALAQNWGTRSFMKEHFFMPGLSPEDAVLRIKQTAEGLHNLREMLETLSWRYV 118

Query: 455 IFYIRLKSAYLNQDLKTAMTIMPESRKDSYVEKANELVDNMAELDYYVRTPKIYESYLYY 634
           +FYIRLK  YL QDL+ A+T +PE+R+  YV+ ANELVDN+ E+D YVRTPK+YESYLYY
Sbjct: 119 MFYIRLKQNYLEQDLRNAITTLPENRRKEYVKTANELVDNLTEMDRYVRTPKVYESYLYY 178

Query: 635 EKTLKSLDDLVELLA 679
           EKTLKS+D+LV  LA
Sbjct: 179 EKTLKSIDELVAQLA 193


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