BLASTX nr result
ID: Coptis25_contig00025180
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025180 (546 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AGE93502.1| ribosomal protein S12 [Xiphidium caeruleum] gi|44... 60 3e-07 gb|AGE93244.1| ribosomal protein S12 [Calectasia narragara] gi|4... 60 3e-07 ref|YP_007475683.1| ribosomal protein S12 [Zingiber spectabile] ... 60 3e-07 ref|YP_007475598.1| ribosomal protein S12 [Heliconia collinsiana... 60 3e-07 ref|YP_007476026.1| ribosomal protein S12 [Dasypogon bromeliifol... 60 3e-07 >gb|AGE93502.1| ribosomal protein S12 [Xiphidium caeruleum] gi|449326938|gb|AGE93515.1| ribosomal protein S12 [Xiphidium caeruleum] Length = 122 Score = 59.7 bits (143), Expect = 3e-07 Identities = 28/29 (96%), Positives = 28/29 (96%) Frame = -2 Query: 89 RYHIV*GTLDAVGVKDRQQGRSKYGVKKP 3 RYHIV GTLDAVGVKDRQQGRSKYGVKKP Sbjct: 93 RYHIVRGTLDAVGVKDRQQGRSKYGVKKP 121 >gb|AGE93244.1| ribosomal protein S12 [Calectasia narragara] gi|449326677|gb|AGE93257.1| ribosomal protein S12 [Calectasia narragara] Length = 122 Score = 59.7 bits (143), Expect = 3e-07 Identities = 28/29 (96%), Positives = 28/29 (96%) Frame = -2 Query: 89 RYHIV*GTLDAVGVKDRQQGRSKYGVKKP 3 RYHIV GTLDAVGVKDRQQGRSKYGVKKP Sbjct: 93 RYHIVRGTLDAVGVKDRQQGRSKYGVKKP 121 >ref|YP_007475683.1| ribosomal protein S12 [Zingiber spectabile] gi|456061615|ref|YP_007475728.1| ribosomal protein S12 [Zingiber spectabile] gi|449326230|gb|AGE92815.1| ribosomal protein S12 [Zingiber spectabile] gi|449326243|gb|AGE92828.1| ribosomal protein S12 [Zingiber spectabile] gi|449326838|gb|AGE93416.1| ribosomal protein S12 [Alpinia zerumbet] gi|449326851|gb|AGE93429.1| ribosomal protein S12 [Alpinia zerumbet] Length = 122 Score = 59.7 bits (143), Expect = 3e-07 Identities = 28/29 (96%), Positives = 28/29 (96%) Frame = -2 Query: 89 RYHIV*GTLDAVGVKDRQQGRSKYGVKKP 3 RYHIV GTLDAVGVKDRQQGRSKYGVKKP Sbjct: 93 RYHIVRGTLDAVGVKDRQQGRSKYGVKKP 121 >ref|YP_007475598.1| ribosomal protein S12 [Heliconia collinsiana] gi|449326144|gb|AGE92730.1| ribosomal protein S12 [Heliconia collinsiana] Length = 122 Score = 59.7 bits (143), Expect = 3e-07 Identities = 28/29 (96%), Positives = 28/29 (96%) Frame = -2 Query: 89 RYHIV*GTLDAVGVKDRQQGRSKYGVKKP 3 RYHIV GTLDAVGVKDRQQGRSKYGVKKP Sbjct: 93 RYHIVRGTLDAVGVKDRQQGRSKYGVKKP 121 >ref|YP_007476026.1| ribosomal protein S12 [Dasypogon bromeliifolius] gi|456061946|ref|YP_007476071.1| ribosomal protein S12 [Dasypogon bromeliifolius] gi|392841362|gb|AFM83317.1| ribosomal protein S12 (chloroplast) [Kingia australis] gi|392841397|gb|AFM83352.1| ribosomal protein S12 (chloroplast) [Kingia australis] gi|449326577|gb|AGE93158.1| ribosomal protein S12 [Dasypogon bromeliifolius] gi|449326591|gb|AGE93172.1| ribosomal protein S12 [Dasypogon bromeliifolius] Length = 122 Score = 59.7 bits (143), Expect = 3e-07 Identities = 28/29 (96%), Positives = 28/29 (96%) Frame = -2 Query: 89 RYHIV*GTLDAVGVKDRQQGRSKYGVKKP 3 RYHIV GTLDAVGVKDRQQGRSKYGVKKP Sbjct: 93 RYHIVRGTLDAVGVKDRQQGRSKYGVKKP 121