BLASTX nr result

ID: Coptis25_contig00025166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025166
         (1357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270403.1| PREDICTED: armadillo repeat-containing prote...   298   2e-78
ref|XP_003616184.1| Armadillo repeat-containing protein [Medicag...   293   9e-77
ref|XP_002298151.1| predicted protein [Populus trichocarpa] gi|2...   285   1e-74
ref|XP_002464889.1| hypothetical protein SORBIDRAFT_01g028300 [S...   281   4e-73
ref|NP_001132765.1| uncharacterized protein LOC100194252 [Zea ma...   281   4e-73

>ref|XP_002270403.1| PREDICTED: armadillo repeat-containing protein 7 [Vitis vinifera]
           gi|297738150|emb|CBI27351.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score =  298 bits (763), Expect = 2e-78
 Identities = 138/174 (79%), Positives = 160/174 (91%)
 Frame = +3

Query: 156 MFTNEKRQIERTGRYGTPRVQYLQELVSEFQNTTSEESKERVVAHLANFAYDPYNFSFLR 335
           MFTN++RQ ERTGRYGTPRVQYLQELVS+FQN T+EE+KER+ A+LANFAYDPYN++FLR
Sbjct: 1   MFTNKRRQEERTGRYGTPRVQYLQELVSQFQNATNEETKERIAANLANFAYDPYNYNFLR 60

Query: 336 QLNVLELFLDCITEPNEKLVEFSAGGICNCCVDPANAVIIAECGGIPLITQCLSSPVRNT 515
           QLNVLELFLDCITEPNEKLVEF  GGICN C DP NA +I  CGGIPLI QCLSSPVRNT
Sbjct: 61  QLNVLELFLDCITEPNEKLVEFGVGGICNSCADPENAAVITNCGGIPLIIQCLSSPVRNT 120

Query: 516 VNYALGALYYLCNNSNKEEILKPEVVEVIKRYAAAGAVSVSFSNLAQAFMEKHL 677
           VNY +GALYY+CN SNKEEI++PEVV+VIK+YAAAG+VSV+FSNLA+AF++KH+
Sbjct: 121 VNYGIGALYYICNESNKEEIVRPEVVDVIKKYAAAGSVSVNFSNLAKAFLDKHV 174


>ref|XP_003616184.1| Armadillo repeat-containing protein [Medicago truncatula]
           gi|355517519|gb|AES99142.1| Armadillo repeat-containing
           protein [Medicago truncatula]
           gi|388504388|gb|AFK40260.1| unknown [Medicago
           truncatula]
          Length = 178

 Score =  293 bits (749), Expect = 9e-77
 Identities = 136/174 (78%), Positives = 160/174 (91%)
 Frame = +3

Query: 156 MFTNEKRQIERTGRYGTPRVQYLQELVSEFQNTTSEESKERVVAHLANFAYDPYNFSFLR 335
           MFTN +RQ+ERTGRYGT R+QYLQELV++FQN++ +E KE+++A+LANFAYDPYNF+FLR
Sbjct: 1   MFTNNQRQLERTGRYGTSRLQYLQELVTQFQNSSEDEIKEKILANLANFAYDPYNFNFLR 60

Query: 336 QLNVLELFLDCITEPNEKLVEFSAGGICNCCVDPANAVIIAECGGIPLITQCLSSPVRNT 515
           QLNVLELFLDC+TEPNEK++EF  GGICN CVDPANA I+A  GGIPLI QCLSSPVRNT
Sbjct: 61  QLNVLELFLDCVTEPNEKIIEFGVGGICNSCVDPANATIVAGVGGIPLIIQCLSSPVRNT 120

Query: 516 VNYALGALYYLCNNSNKEEILKPEVVEVIKRYAAAGAVSVSFSNLAQAFMEKHL 677
           VNYALGALYY+CN SNKEE+LKPEV++VIKRYAAA  VSVSFSNLA+AF++KHL
Sbjct: 121 VNYALGALYYICNESNKEEVLKPEVIDVIKRYAAAEEVSVSFSNLAKAFLDKHL 174


>ref|XP_002298151.1| predicted protein [Populus trichocarpa] gi|222845409|gb|EEE82956.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  285 bits (730), Expect = 1e-74
 Identities = 136/174 (78%), Positives = 155/174 (89%)
 Frame = +3

Query: 156 MFTNEKRQIERTGRYGTPRVQYLQELVSEFQNTTSEESKERVVAHLANFAYDPYNFSFLR 335
           MFTN +RQ ERTG+YGTPR+QYLQELV++FQN   EE KER+VA+LANFAYDPYN++FLR
Sbjct: 1   MFTNNQRQEERTGKYGTPRLQYLQELVNQFQNAADEERKERIVANLANFAYDPYNYTFLR 60

Query: 336 QLNVLELFLDCITEPNEKLVEFSAGGICNCCVDPANAVIIAECGGIPLITQCLSSPVRNT 515
           QLNVLELFLDCITEPNEKLVEF  GGICN C DPANA II + GGIPL  QCLSSPVRNT
Sbjct: 61  QLNVLELFLDCITEPNEKLVEFGIGGICNSCDDPANAAIITQSGGIPLTIQCLSSPVRNT 120

Query: 516 VNYALGALYYLCNNSNKEEILKPEVVEVIKRYAAAGAVSVSFSNLAQAFMEKHL 677
           VNYALG+LYYLCN+S KEEILKPEV++VIKRYAA   V+VSFSNLA+AF++KH+
Sbjct: 121 VNYALGSLYYLCNSSTKEEILKPEVLDVIKRYAACETVNVSFSNLAKAFLDKHV 174


>ref|XP_002464889.1| hypothetical protein SORBIDRAFT_01g028300 [Sorghum bicolor]
           gi|241918743|gb|EER91887.1| hypothetical protein
           SORBIDRAFT_01g028300 [Sorghum bicolor]
          Length = 176

 Score =  281 bits (718), Expect = 4e-73
 Identities = 131/174 (75%), Positives = 155/174 (89%)
 Frame = +3

Query: 156 MFTNEKRQIERTGRYGTPRVQYLQELVSEFQNTTSEESKERVVAHLANFAYDPYNFSFLR 335
           MFTN +RQ+ERTGR GTPR QYLQ+LV++FQ+ T EESKE++VA+LANFAYDP+N++F+R
Sbjct: 1   MFTNAQRQVERTGRSGTPRDQYLQDLVTQFQSATDEESKEKIVANLANFAYDPFNYAFMR 60

Query: 336 QLNVLELFLDCITEPNEKLVEFSAGGICNCCVDPANAVIIAECGGIPLITQCLSSPVRNT 515
           QLNVLELFLDCITEPNE+LVEF  GGICN CVDPANA II +CGGIPL+ QCLSSPVRNT
Sbjct: 61  QLNVLELFLDCITEPNERLVEFGIGGICNSCVDPANASIITQCGGIPLVIQCLSSPVRNT 120

Query: 516 VNYALGALYYLCNNSNKEEILKPEVVEVIKRYAAAGAVSVSFSNLAQAFMEKHL 677
           V YALGALYYLCN+  K+EILKP+VV  I+ YA+AGAV+ SFSNLA AF+EKH+
Sbjct: 121 VTYALGALYYLCNSLTKKEILKPDVVRTIREYASAGAVNTSFSNLANAFLEKHV 174


>ref|NP_001132765.1| uncharacterized protein LOC100194252 [Zea mays]
           gi|194695338|gb|ACF81753.1| unknown [Zea mays]
           gi|238006382|gb|ACR34226.1| unknown [Zea mays]
           gi|413923648|gb|AFW63580.1| hypothetical protein
           ZEAMMB73_692312 [Zea mays]
          Length = 176

 Score =  281 bits (718), Expect = 4e-73
 Identities = 130/174 (74%), Positives = 155/174 (89%)
 Frame = +3

Query: 156 MFTNEKRQIERTGRYGTPRVQYLQELVSEFQNTTSEESKERVVAHLANFAYDPYNFSFLR 335
           MFTN +RQ+ERTGR GTPR QYLQ+LV++FQN T EESKE++VA+LANFAYDP+N++F+R
Sbjct: 1   MFTNAQRQVERTGRSGTPRDQYLQDLVTQFQNATDEESKEKIVANLANFAYDPFNYAFMR 60

Query: 336 QLNVLELFLDCITEPNEKLVEFSAGGICNCCVDPANAVIIAECGGIPLITQCLSSPVRNT 515
           QLNVLELFLDCITEPNE+L+EF  GGICN CVDPANA+II +CGGIPL+ QCLSSPVRNT
Sbjct: 61  QLNVLELFLDCITEPNERLIEFGIGGICNSCVDPANALIITQCGGIPLVIQCLSSPVRNT 120

Query: 516 VNYALGALYYLCNNSNKEEILKPEVVEVIKRYAAAGAVSVSFSNLAQAFMEKHL 677
           V YALGALYYLCN S K+EILKP+VV  I+ YA+AG V+ +FSNLA AF+EKH+
Sbjct: 121 VTYALGALYYLCNPSTKKEILKPDVVSTIREYASAGTVNNNFSNLANAFLEKHV 174


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