BLASTX nr result

ID: Coptis25_contig00025157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025157
         (1225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reduc...   474   e-131
ref|XP_002513357.1| 2,4-dienoyl-CoA reductase, putative [Ricinus...   469   e-130
ref|XP_002884927.1| short-chain dehydrogenase/reductase family p...   467   e-129
ref|NP_001239792.1| uncharacterized protein LOC100793630 [Glycin...   467   e-129
ref|XP_002275982.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reduc...   466   e-129

>ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera]
            gi|297736138|emb|CBI24176.3| unnamed protein product
            [Vitis vinifera]
          Length = 297

 Score =  474 bits (1220), Expect = e-131
 Identities = 232/295 (78%), Positives = 261/295 (88%)
 Frame = +3

Query: 126  SPFKDDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIK 305
            SPFK D+LKGKVAL+TGGGSGIGFEISTQ G HGA +AIMGRR+ VLDSAVS L +QGI 
Sbjct: 3    SPFKADVLKGKVALLTGGGSGIGFEISTQFGLHGASIAIMGRRKQVLDSAVSGLCSQGIP 62

Query: 306  AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRTVLDIDSV 485
            A+G  GDVRK EDA RVVE TVKHFG+LDILVN AAGNFLV +EDLSPNGFRTV+DIDSV
Sbjct: 63   AVGFVGDVRKQEDAKRVVESTVKHFGRLDILVNAAAGNFLVSSEDLSPNGFRTVMDIDSV 122

Query: 486  GTFTMCHESLKYLKKGGPGRDSAVGGTILNISATLHYTASWYQIHVSAAKAAVDSLTRSL 665
            GTFTMCHE+LKYLKKGGPGR  + GG+ILNISATLHYTA+WYQIHVSAAKAAVD+ TR+L
Sbjct: 123  GTFTMCHEALKYLKKGGPGRSFSSGGSILNISATLHYTAAWYQIHVSAAKAAVDATTRNL 182

Query: 666  ALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKIGDMLPLYKLGERWDIAMAAVYL 845
            ALEWGTDYDIRVNGIAPGPI  T GMSKL P+E  +K  +++PLYKLGE+WDIAMAA+YL
Sbjct: 183  ALEWGTDYDIRVNGIAPGPIGDTAGMSKLAPEEISNKAREIMPLYKLGEKWDIAMAALYL 242

Query: 846  ASDAGKYVNGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTSKL 1010
            ASDAGKY+NGTTLVVD GLWLSRPRH+ K+ V+++SRAVE+RSR  PVG P SKL
Sbjct: 243  ASDAGKYINGTTLVVDGGLWLSRPRHLPKEAVKQLSRAVEKRSRGVPVGVPKSKL 297


>ref|XP_002513357.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]
            gi|223547265|gb|EEF48760.1| 2,4-dienoyl-CoA reductase,
            putative [Ricinus communis]
          Length = 297

 Score =  469 bits (1208), Expect = e-130
 Identities = 231/295 (78%), Positives = 258/295 (87%)
 Frame = +3

Query: 126  SPFKDDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIK 305
            SPFK DILKGKVALITGGGSGIGFEISTQ GKHGA VAIMGRR+ VLDSAVS L +  I 
Sbjct: 3    SPFKRDILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDSAVSHLNSLQIP 62

Query: 306  AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRTVLDIDSV 485
            ++G  GDVRK EDA RV+E T KHFG++DILVN AAGNFLV  EDLSPNGFRTV+DID+V
Sbjct: 63   SVGFVGDVRKQEDAKRVLESTFKHFGRIDILVNAAAGNFLVSPEDLSPNGFRTVMDIDAV 122

Query: 486  GTFTMCHESLKYLKKGGPGRDSAVGGTILNISATLHYTASWYQIHVSAAKAAVDSLTRSL 665
            GTFTMCHESLKYLK GG GR S+ GGTILNISATLHYTA+WYQIHVSAAKAAVD++ R+L
Sbjct: 123  GTFTMCHESLKYLKIGGLGRSSSGGGTILNISATLHYTAAWYQIHVSAAKAAVDAIARNL 182

Query: 666  ALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKIGDMLPLYKLGERWDIAMAAVYL 845
            ALEWGTDYDIRVNGIAPGPI  TPGMSKL PD+  SK  D +PLYKLGE+WDIAMAA+YL
Sbjct: 183  ALEWGTDYDIRVNGIAPGPIGDTPGMSKLAPDDINSKARDYMPLYKLGEKWDIAMAALYL 242

Query: 846  ASDAGKYVNGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTSKL 1010
            ASDAGK+VNGTT+VVD GLWLSRPRH+ K  V+++SR VE+RSR+APVG P+SKL
Sbjct: 243  ASDAGKFVNGTTIVVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDAPVGVPSSKL 297


>ref|XP_002884927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
            lyrata subsp. lyrata] gi|297330767|gb|EFH61186.1|
            short-chain dehydrogenase/reductase family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 298

 Score =  467 bits (1201), Expect = e-129
 Identities = 227/296 (76%), Positives = 263/296 (88%), Gaps = 1/296 (0%)
 Frame = +3

Query: 126  SPFKDDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIK 305
            SPFK D+++G+VALITGGGSGIGFEIS+Q GKHGA +AIMGRR+ VLD AVS LR+ GI+
Sbjct: 3    SPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLGIQ 62

Query: 306  AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRTVLDIDSV 485
            AIGLEGDVRK EDA RVVE T +HFG++DILVN AAGNFL  AEDLSPNGFRTVLDID+V
Sbjct: 63   AIGLEGDVRKQEDARRVVEATYQHFGRIDILVNAAAGNFLAAAEDLSPNGFRTVLDIDAV 122

Query: 486  GTFTMCHESLKYLKKGGPGRDSAVGG-TILNISATLHYTASWYQIHVSAAKAAVDSLTRS 662
            GTF MCH +LKYLKKGGPGRDS+ GG +I+NISATLHYTASWYQIHVSAAKAAVD+ TR+
Sbjct: 123  GTFNMCHAALKYLKKGGPGRDSSTGGGSIINISATLHYTASWYQIHVSAAKAAVDATTRN 182

Query: 663  LALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKIGDMLPLYKLGERWDIAMAAVY 842
            LALEWGTDYDIRVNGIAPGPI GTPGMSKL P+E ++K  + +PLYKLGE+WDIAMAA+Y
Sbjct: 183  LALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDIAMAALY 242

Query: 843  LASDAGKYVNGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTSKL 1010
            L+ D+GKYVNG T+VVD GLWLS+PRH+ K+ V+++SRAVE+RSR  PVG PTSKL
Sbjct: 243  LSCDSGKYVNGLTVVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298


>ref|NP_001239792.1| uncharacterized protein LOC100793630 [Glycine max]
            gi|255647355|gb|ACU24144.1| unknown [Glycine max]
          Length = 298

 Score =  467 bits (1201), Expect = e-129
 Identities = 230/296 (77%), Positives = 260/296 (87%), Gaps = 1/296 (0%)
 Frame = +3

Query: 126  SPFKDDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIK 305
            SPFK +ILKGKVALITGG SGIGFEISTQ GKHGA VA+MGRR+ VL SAVS L++  I 
Sbjct: 3    SPFKPEILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLVIP 62

Query: 306  AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRTVLDIDSV 485
            A+G EGDVRK EDA RVVE T KHFG++DILVN AAGNFLV AEDLS NGFRTVLDIDSV
Sbjct: 63   AVGFEGDVRKQEDAARVVESTFKHFGRIDILVNAAAGNFLVSAEDLSSNGFRTVLDIDSV 122

Query: 486  GTFTMCHESLKYLKKGGPGR-DSAVGGTILNISATLHYTASWYQIHVSAAKAAVDSLTRS 662
            GTFTMCHE+LKYLKKGG GR +S+ GG+I+NISATLHYTASWYQIHVSAAKAAVD+ TR+
Sbjct: 123  GTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYTASWYQIHVSAAKAAVDATTRN 182

Query: 663  LALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKIGDMLPLYKLGERWDIAMAAVY 842
            LALEWGTDYDIRVNGIAPGPI GTPGMSKL PDE  SK  D +PLYKLGE+WDIAMAA++
Sbjct: 183  LALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMAALF 242

Query: 843  LASDAGKYVNGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTSKL 1010
            LASDAGK+VNG T++VD GLWLSRPRH++K+ V+++SR+VE+RSR  PVG P SKL
Sbjct: 243  LASDAGKFVNGDTMIVDGGLWLSRPRHLEKEAVKQVSRSVEKRSRNVPVGVPKSKL 298


>ref|XP_002275982.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera]
            gi|147772171|emb|CAN73418.1| hypothetical protein
            VITISV_019955 [Vitis vinifera]
            gi|297737992|emb|CBI27193.3| unnamed protein product
            [Vitis vinifera]
          Length = 297

 Score =  466 bits (1200), Expect = e-129
 Identities = 226/295 (76%), Positives = 260/295 (88%)
 Frame = +3

Query: 126  SPFKDDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIK 305
            SPF+ DILKGKVAL+TGGGSGIG+EIS QLGKHGA +AIMGRRR VLD+AVS L + GI 
Sbjct: 3    SPFRGDILKGKVALLTGGGSGIGYEISRQLGKHGASIAIMGRRRQVLDAAVSSLHSLGIP 62

Query: 306  AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRTVLDIDSV 485
            AIGLEGDVRK EDA RV+E T+KHFG+LDILVN AAGNFLVPAEDLSP GF+TV+DIDSV
Sbjct: 63   AIGLEGDVRKQEDAVRVLESTIKHFGRLDILVNAAAGNFLVPAEDLSPKGFQTVIDIDSV 122

Query: 486  GTFTMCHESLKYLKKGGPGRDSAVGGTILNISATLHYTASWYQIHVSAAKAAVDSLTRSL 665
            GTFTMCHE+L+YLKKGGPG+  + GG I+NISATLHYTA+WYQIHVSAAKAAVDS+TRSL
Sbjct: 123  GTFTMCHEALQYLKKGGPGKSPSTGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 182

Query: 666  ALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKIGDMLPLYKLGERWDIAMAAVYL 845
            ALEWGTDYDIRVNGIAPGPI+ T G+SKL P++   K  +  PL+KLGE+WDIAMAAVYL
Sbjct: 183  ALEWGTDYDIRVNGIAPGPIDDTAGLSKLAPEDVVRKAKEHEPLFKLGEKWDIAMAAVYL 242

Query: 846  ASDAGKYVNGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTSKL 1010
            AS+AGKY+NGTTL VD GLWLS+PRH+ K+ V+++SRAVERRSR+  VG P SKL
Sbjct: 243  ASNAGKYINGTTLTVDGGLWLSKPRHLSKEAVKQLSRAVERRSRKILVGVPKSKL 297


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