BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025152
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523271.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002450315.1| hypothetical protein SORBIDRAFT_05g003600 [S...    58   9e-07
ref|XP_002460118.1| hypothetical protein SORBIDRAFT_02g023020 [S...    58   9e-07
ref|XP_002442207.1| hypothetical protein SORBIDRAFT_08g016373 [S...    56   4e-06

>ref|XP_002523271.1| conserved hypothetical protein [Ricinus communis]
           gi|223537484|gb|EEF39110.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 233

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
 Frame = +1

Query: 46  LHHGGSFVTSPD--LHYLGSRIECLGNIDPDRFGYFDLKSMVEELGYYNVSKMHYGQASS 219
           LHHGG FV +    + Y G       N D D+ GY D+ S V ELGY ++SK+ Y     
Sbjct: 9   LHHGGLFVENDIGIVEYEGGEFMHFDNCDLDKSGYLDILSDVRELGYSSLSKITYLNLEQ 68

Query: 220 KGYMLIFDDTSIIKMLQEVKAGNRIEVYIEHDVEVDSSEQNVVHDIEVVELENGEDIEIQ 399
             +   +++  +++ML  V+ G    VYIE ++ VD   +N   +   +E     D+E  
Sbjct: 69  GVFCFFYNNKGVMEMLSCVRDG-VFHVYIEGELIVDFEGENDTGENGAIE----NDVESN 123

Query: 400 TQLQSDK 420
            + Q D+
Sbjct: 124 DEAQPDE 130


>ref|XP_002450315.1| hypothetical protein SORBIDRAFT_05g003600 [Sorghum bicolor]
           gi|241936158|gb|EES09303.1| hypothetical protein
           SORBIDRAFT_05g003600 [Sorghum bicolor]
          Length = 791

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
 Frame = +1

Query: 34  VVINLHHGGSF--VTSPDLHYLGSRIECLGNIDPDRFGYFDLKSMVEELGYY---NVSKM 198
           V++  H+ GSF  V     +  G   EC   ID DR  YF++K  +++  +Y   NV +M
Sbjct: 16  VIVRFHYAGSFTKVGRSTFYVGGDGAECW--IDRDRVSYFEIKGYLDD--HYTSNNVIRM 71

Query: 199 HY---GQASSKGYMLIFDDTSIIKMLQEVKAGNRIEVYIEHDVEVDSSEQNVVHDIEVVE 369
           ++   G+    G +L+ DD + ++ML +   G  +++Y+E   E+ + EQ++    +  E
Sbjct: 72  YWLKPGKNLDTGLVLLSDDAACVQMLADHPNGEVVDMYVEEVAEISADEQDIWAGDDDAE 131

Query: 370 LENGEDIEIQTQLQSDKVCISDDNESDEEDFRFEDLPELSDNDE 501
               E+   + Q   ++    +  E  EED   E   +  + +E
Sbjct: 132 QGVEEEAAEEGQEGGEEEAAEEGQEGGEEDAAEEGQEDGKEEEE 175


>ref|XP_002460118.1| hypothetical protein SORBIDRAFT_02g023020 [Sorghum bicolor]
           gi|241923495|gb|EER96639.1| hypothetical protein
           SORBIDRAFT_02g023020 [Sorghum bicolor]
          Length = 1036

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
 Frame = +1

Query: 34  VVINLHHGGSF--VTSPDLHYLGSRIECLGNIDPDRFGYFDLKSMVEELGYY---NVSKM 198
           V++  H+ GSF  V     +  G   EC   ID DR  YF++K  +++  +Y   NV +M
Sbjct: 16  VIVRFHYAGSFTKVGRSTFYVGGDGAECW--IDRDRVSYFEIKGYLDD--HYTSNNVIRM 71

Query: 199 HY---GQASSKGYMLIFDDTSIIKMLQEVKAGNRIEVYIEHDVEVDSSEQNVVHDIEVVE 369
           ++   G+    G +L+ DD + ++ML +   G  +++Y+E   E+ + EQ++    +  E
Sbjct: 72  YWLKPGKNLDTGLVLLSDDAACVQMLADHPNGEVVDMYVEEVAEISADEQDIWAGDDDAE 131

Query: 370 LENGEDIEIQTQLQSDKVCISDDNESDEEDFRFEDLPELSDNDE 501
               E+   + Q   ++    +  E  EED   E   +  + +E
Sbjct: 132 QGVEEEAAEEGQEGGEEEAAKEGQEGGEEDAAEEGQEDGKEEEE 175


>ref|XP_002442207.1| hypothetical protein SORBIDRAFT_08g016373 [Sorghum bicolor]
           gi|241942900|gb|EES16045.1| hypothetical protein
           SORBIDRAFT_08g016373 [Sorghum bicolor]
          Length = 510

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
 Frame = +1

Query: 34  VVINLHHGGSF--VTSPDLHYLGSRIECLGNIDPDRFGYFDLKSMVEELGYY---NVSKM 198
           V++  H+ GSF  V     +  G   EC   ID DR  YF++K  +++  +Y   NV +M
Sbjct: 7   VIVRFHYAGSFTKVGRSTFYVGGDGAECW--IDRDRVSYFEIKGYLDD--HYTSNNVIRM 62

Query: 199 HY---GQASSKGYMLIFDDTSIIKMLQEVKAGNRIEVYIEHDVEVDSSEQNVVHDIEVVE 369
           ++   G+    G +L+ DD + ++ML +   G  +++Y+E   E+ + EQ++    +  E
Sbjct: 63  YWLKPGKNLDTGLVLLSDDAACVQMLADHPNGEVVDMYVEEVAEISADEQDIWAGDDDAE 122

Query: 370 LENGEDIEIQTQLQSDKVCISDDNESDEED 459
               E+   + Q   ++    +  E  EE+
Sbjct: 123 QGVEEEAAEEGQEGGEEEAAKEGQEGGEEE 152