BLASTX nr result

ID: Coptis25_contig00025146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025146
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853...   281   2e-73
ref|XP_003537197.1| PREDICTED: uncharacterized protein LOC100816...   260   2e-67
emb|CBI23078.3| unnamed protein product [Vitis vinifera]              258   1e-66
ref|XP_003545662.1| PREDICTED: uncharacterized protein LOC100804...   256   3e-66
ref|XP_002524414.1| nucleotide binding protein, putative [Ricinu...   256   4e-66

>ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853102 [Vitis vinifera]
          Length = 864

 Score =  281 bits (718), Expect = 2e-73
 Identities = 150/271 (55%), Positives = 188/271 (69%), Gaps = 1/271 (0%)
 Frame = -2

Query: 811  NAMLSSTIVAWSPVLRLSLETDSTHMNSLPNYFSLLSVGGKSGKISFWRIHEPQSYSIVQ 632
            NAMLSS +VAWSPVL L  ETDS   ++  N FSLL+VGGKSGKISFWR+HEP SY++  
Sbjct: 220  NAMLSSLVVAWSPVLCLPPETDSAPPDNSSNCFSLLAVGGKSGKISFWRVHEPLSYTVEH 279

Query: 631  NGVHVDVIHVGLLQAHNGWITAICWEIFAINSSISQVVLATGSSDGR*VSLKIWEVDTEE 452
            + V + V+  G  QAHN W+TAI W +   ++S  QV+LATGS+DG   S+KIW   +E+
Sbjct: 280  SRVPISVMLAGFHQAHNTWVTAISWALLTSDASSPQVLLATGSTDG---SVKIWLEYSEK 336

Query: 451  LLTSSELNCSSIRLLMEVTPATSTPVSVLSLTAPAESLGKVLLAVGRGSGLLEVWICDIS 272
            LL SSE+N     LL EV  A S PVSVL+L  P +S  K+ LAVG+G G  EVWICD+S
Sbjct: 337  LLKSSEVNDPPFSLLKEVINADSVPVSVLTLIVPVQSPQKMFLAVGKGCGSFEVWICDLS 396

Query: 271  SCEFQISGSYDAHIQVITGLTWAFNGRSLYSCSQDDSLRSWILHGGSLYEAPIPSNS-FV 95
              +F   GSY+AH  V+TGL WAF+G  LYSCSQD+S+RSW L G SL E PIP N+  V
Sbjct: 397  IRKFDRIGSYNAHDHVVTGLAWAFDGCCLYSCSQDNSVRSWSLCGNSLDEVPIPPNTPGV 456

Query: 94   LQSSVNLPQASDSCFGLALSPGNLVLTVVHG 2
               + +LP    SC+G+A+SPGNLV+ V  G
Sbjct: 457  KNPADDLPYLFGSCYGVAVSPGNLVVAVARG 487


>ref|XP_003537197.1| PREDICTED: uncharacterized protein LOC100816957 [Glycine max]
          Length = 839

 Score =  260 bits (665), Expect = 2e-67
 Identities = 140/269 (52%), Positives = 181/269 (67%)
 Frame = -2

Query: 811 NAMLSSTIVAWSPVLRLSLETDSTHMNSLPNYFSLLSVGGKSGKISFWRIHEPQSYSIVQ 632
           +AML S +V+WSP+LRL+ E     +  + +  SLL+VGGKSGKIS WR H P+ Y+I  
Sbjct: 203 SAMLCSLVVSWSPLLRLASE-----LYPVCDSVSLLAVGGKSGKISLWRFHPPECYTIED 257

Query: 631 NGVHVDVIHVGLLQAHNGWITAICWEIFAINSSISQVVLATGSSDGR*VSLKIWEVDTEE 452
             V   V  VGLLQAHN W+T I W +FA +SS  Q++LA+GSSDG   S+KIW  D ++
Sbjct: 258 REVPTTVKFVGLLQAHNSWVTTISWLLFAFDSSNPQILLASGSSDG---SVKIWLADNDK 314

Query: 451 LLTSSELNCSSIRLLMEVTPATSTPVSVLSLTAPAESLGKVLLAVGRGSGLLEVWICDIS 272
           LL SS+++ +S  LL EV    + PVSVLS+T   +   K+LLA G+ SG  E+W+CDIS
Sbjct: 315 LLKSSKVDQTSFSLLKEVITVNAVPVSVLSVTTHVQYPSKMLLATGKVSGSFEIWLCDIS 374

Query: 271 SCEFQISGSYDAHIQVITGLTWAFNGRSLYSCSQDDSLRSWILHGGSLYEAPIPSNSFVL 92
           S EF   GSY+AH  V+TGLTWAF GR LYSCSQD+ +RSWILH   L E  + S+    
Sbjct: 375 SREFDKLGSYNAHDLVVTGLTWAFGGRFLYSCSQDNLVRSWILHENRLDEVTLVSDMPRD 434

Query: 91  QSSVNLPQASDSCFGLALSPGNLVLTVVH 5
            S     +A DSCFG+A+SPGNLV+  VH
Sbjct: 435 SSICISREAFDSCFGVAVSPGNLVIATVH 463


>emb|CBI23078.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  258 bits (659), Expect = 1e-66
 Identities = 139/258 (53%), Positives = 176/258 (68%), Gaps = 1/258 (0%)
 Frame = -2

Query: 772 VLRLSLETDSTHMNSLPNYFSLLSVGGKSGKISFWRIHEPQSYSIVQNGVHVDVIHVGLL 593
           VL L  ETDS   ++  N FSLL+VGGKSGKISFWR+HEP SY++  + V + V+  G  
Sbjct: 169 VLCLPPETDSAPPDNSSNCFSLLAVGGKSGKISFWRVHEPLSYTVEHSRVPISVMLAGFH 228

Query: 592 QAHNGWITAICWEIFAINSSISQVVLATGSSDGR*VSLKIWEVDTEELLTSSELNCSSIR 413
           QAHN W+TAI W +   ++S  QV+LATGS+DG   S+KIW   +E+LL SSE+N     
Sbjct: 229 QAHNTWVTAISWALLTSDASSPQVLLATGSTDG---SVKIWLEYSEKLLKSSEVNDPPFS 285

Query: 412 LLMEVTPATSTPVSVLSLTAPAESLGKVLLAVGRGSGLLEVWICDISSCEFQISGSYDAH 233
           LL EV  A S PVSVL+L  P +S  K+ LAVG+G G  EVWICD+S  +F   GSY+AH
Sbjct: 286 LLKEVINADSVPVSVLTLIVPVQSPQKMFLAVGKGCGSFEVWICDLSIRKFDRIGSYNAH 345

Query: 232 IQVITGLTWAFNGRSLYSCSQDDSLRSWILHGGSLYEAPIPSNS-FVLQSSVNLPQASDS 56
             V+TGL WAF+G  LYSCSQD+S+RSW L G SL E PIP N+  V   + +LP    S
Sbjct: 346 DHVVTGLAWAFDGCCLYSCSQDNSVRSWSLCGNSLDEVPIPPNTPGVKNPADDLPYLFGS 405

Query: 55  CFGLALSPGNLVLTVVHG 2
           C+G+A+SPGNLV+ V  G
Sbjct: 406 CYGVAVSPGNLVVAVARG 423


>ref|XP_003545662.1| PREDICTED: uncharacterized protein LOC100804583 [Glycine max]
          Length = 879

 Score =  256 bits (655), Expect = 3e-66
 Identities = 139/269 (51%), Positives = 179/269 (66%)
 Frame = -2

Query: 811  NAMLSSTIVAWSPVLRLSLETDSTHMNSLPNYFSLLSVGGKSGKISFWRIHEPQSYSIVQ 632
            +AML S +V+WSP+LRL+ E     +  + +  SLL+VGGKSGKIS WR H    Y+I  
Sbjct: 242  SAMLCSLVVSWSPLLRLASE-----LYPVCDSVSLLAVGGKSGKISLWRFHPTDCYTIED 296

Query: 631  NGVHVDVIHVGLLQAHNGWITAICWEIFAINSSISQVVLATGSSDGR*VSLKIWEVDTEE 452
              V   V  VGLLQAHN W+T I W +FA +SS  Q++LA+GSSDG   S+KIW  D ++
Sbjct: 297  REVPTTVKFVGLLQAHNSWVTTISWLLFAFDSSNPQILLASGSSDG---SVKIWLADNDK 353

Query: 451  LLTSSELNCSSIRLLMEVTPATSTPVSVLSLTAPAESLGKVLLAVGRGSGLLEVWICDIS 272
            LL SS+++ +S  LL EV    + PVSVLS+T   +   K+LLA G+ SG  E+W+CDIS
Sbjct: 354  LLKSSKVDQTSFSLLKEVITVNAVPVSVLSVTTHVQYPSKMLLATGKVSGSFEIWLCDIS 413

Query: 271  SCEFQISGSYDAHIQVITGLTWAFNGRSLYSCSQDDSLRSWILHGGSLYEAPIPSNSFVL 92
            S EF   GSY+AH  V+TGLTWAF GR LYSCSQD+ +RSWILH   L E  + S+    
Sbjct: 414  SGEFDKLGSYNAHDLVVTGLTWAFGGRFLYSCSQDNLVRSWILHENRLDEVTLVSDMPHD 473

Query: 91   QSSVNLPQASDSCFGLALSPGNLVLTVVH 5
             S     +A DSCFG+A+SPGNLV+  VH
Sbjct: 474  SSICISREAFDSCFGVAVSPGNLVIATVH 502


>ref|XP_002524414.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223536298|gb|EEF37949.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 847

 Score =  256 bits (654), Expect = 4e-66
 Identities = 141/268 (52%), Positives = 176/268 (65%)
 Frame = -2

Query: 811  NAMLSSTIVAWSPVLRLSLETDSTHMNSLPNYFSLLSVGGKSGKISFWRIHEPQSYSIVQ 632
            +AMLSS +VAWSP+L LS +      N  P  FSL++VGGKSG IS WRI  PQSYSI  
Sbjct: 283  SAMLSSVVVAWSPLLCLSSKISLVSQNDSPRRFSLIAVGGKSGNISLWRIDAPQSYSIEH 342

Query: 631  NGVHVDVIHVGLLQAHNGWITAICWEIFAINSSISQVVLATGSSDGR*VSLKIWEVDTEE 452
              +   V+ VGLLQAHN W+TA+ +     N++  QV+LA+G SDG   S+KIW    E 
Sbjct: 343  GWLPTSVMLVGLLQAHNSWVTAVNFAFLGSNTN-PQVLLASGCSDG---SVKIWLGSGEI 398

Query: 451  LLTSSELNCSSIRLLMEVTPATSTPVSVLSLTAPAESLGKVLLAVGRGSGLLEVWICDIS 272
            LL SSE N +   LL EV P+   PVSVLS+  P +++ K+LLAVG+GSG  +VW CDIS
Sbjct: 399  LLDSSESNKTPFFLLKEVIPSDFVPVSVLSIKIPVQAVEKMLLAVGKGSGSFDVWTCDIS 458

Query: 271  SCEFQISGSYDAHIQVITGLTWAFNGRSLYSCSQDDSLRSWILHGGSLYEAPIPSNSFVL 92
             CEF   GS DAH  V+TGL WAF G  LYSC QD+ +  W+L G +L E P PSN+  L
Sbjct: 459  GCEFSKCGSNDAHDYVVTGLAWAFEG-CLYSCGQDNYVHCWLLRGNALCEVPFPSNTPSL 517

Query: 91   QSSVNLPQASDSCFGLALSPGNLVLTVV 8
             S  +LP    SC GLA+SPGNLV+ +V
Sbjct: 518  -SLTDLPDVFLSCLGLAISPGNLVVAMV 544


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