BLASTX nr result

ID: Coptis25_contig00025116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025116
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331867.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-15
ref|XP_002271969.2| PREDICTED: uncharacterized protein LOC100245...    82   8e-14
emb|CBI30819.3| unnamed protein product [Vitis vinifera]               82   8e-14
ref|XP_002317304.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-13
ref|XP_003634650.1| PREDICTED: uncharacterized protein LOC100854...    79   9e-13

>ref|XP_002331867.1| predicted protein [Populus trichocarpa] gi|222875385|gb|EEF12516.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/83 (54%), Positives = 56/83 (67%)
 Frame = +3

Query: 6   VSPSQNEQSARWAGGPGSRTMPSLSPGQYYNFQGQNSQFGWDVQQGRKYSQAYGARGYPS 185
           +S  QNE SA W  GPGSRTM ++    YYNFQGQN Q G   +QG++ SQ +GA GYP+
Sbjct: 215 ISLQQNENSAMWMHGPGSRTMSAVPASTYYNFQGQNQQPG-VFRQGQQPSQHFGAPGYPN 273

Query: 186 PHHSQMGASREHLEQILRDRTLG 254
            +HSQ G S EH +Q  RD +LG
Sbjct: 274 YYHSQSGMSLEHQQQNTRDGSLG 296


>ref|XP_002271969.2| PREDICTED: uncharacterized protein LOC100245196 [Vitis vinifera]
          Length = 866

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 42/78 (53%), Positives = 53/78 (67%)
 Frame = +3

Query: 18   QNEQSARWAGGPGSRTMPSLSPGQYYNFQGQNSQFGWDVQQGRKYSQAYGARGYPSPHHS 197
            QNE SA W  GPGSRTM ++    YY+FQGQN Q G   +QG++ SQ +GA GYP+ +HS
Sbjct: 771  QNENSAMWVHGPGSRTMSAVPANTYYSFQGQNQQPG-GFRQGQQPSQHFGALGYPNFYHS 829

Query: 198  QMGASREHLEQILRDRTL 251
            Q G S EH +Q  RD +L
Sbjct: 830  QAGISLEHQQQNPRDGSL 847


>emb|CBI30819.3| unnamed protein product [Vitis vinifera]
          Length = 799

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 42/78 (53%), Positives = 53/78 (67%)
 Frame = +3

Query: 18  QNEQSARWAGGPGSRTMPSLSPGQYYNFQGQNSQFGWDVQQGRKYSQAYGARGYPSPHHS 197
           QNE SA W  GPGSRTM ++    YY+FQGQN Q G   +QG++ SQ +GA GYP+ +HS
Sbjct: 704 QNENSAMWVHGPGSRTMSAVPANTYYSFQGQNQQPG-GFRQGQQPSQHFGALGYPNFYHS 762

Query: 198 QMGASREHLEQILRDRTL 251
           Q G S EH +Q  RD +L
Sbjct: 763 QAGISLEHQQQNPRDGSL 780


>ref|XP_002317304.1| predicted protein [Populus trichocarpa] gi|222860369|gb|EEE97916.1|
            predicted protein [Populus trichocarpa]
          Length = 911

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = +3

Query: 6    VSPSQNEQSARWAGGPGSRTMPSLSPGQYYNFQGQNSQFGWDVQQGRKYSQAYGARGYPS 185
            +S  QNE SA W  GPGSRTM ++    YY+FQGQN Q G   +QG++ SQ +GA GYP+
Sbjct: 811  MSLQQNENSAMWLHGPGSRTMSAVPASTYYSFQGQNQQPG-GFRQGQQPSQHFGALGYPN 869

Query: 186  PHHSQMGASREH-LEQILRDRTLG 254
             +HSQ G S EH  +Q  RD +LG
Sbjct: 870  YYHSQTGMSLEHQQQQNSRDGSLG 893


>ref|XP_003634650.1| PREDICTED: uncharacterized protein LOC100854339 [Vitis vinifera]
          Length = 234

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 40/78 (51%), Positives = 50/78 (64%)
 Frame = +3

Query: 18  QNEQSARWAGGPGSRTMPSLSPGQYYNFQGQNSQFGWDVQQGRKYSQAYGARGYPSPHHS 197
           QNE S  W  GPGS+TM ++    YY+FQGQN Q G   +QG + SQ +G  GYP+ HHS
Sbjct: 139 QNENSTMWNHGPGSQTMSAVPANTYYSFQGQNQQPG-GFRQGHQPSQHFGVLGYPNFHHS 197

Query: 198 QMGASREHLEQILRDRTL 251
           Q G S EH +Q  RD +L
Sbjct: 198 QAGISLEHQQQNPRDGSL 215


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