BLASTX nr result

ID: Coptis25_contig00025101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025101
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 62/206 (30%), Positives = 91/206 (44%), Gaps = 31/206 (15%)
 Frame = -2

Query: 574 KFKKNKFRYFVDSVLLLRDGSDIQKFTLYFSSSCVSDNKRLDRWISYALRRNVQVLTF-- 401
           K K+  F   V+ VLLLRD S+I+KFTL   S  + D  R   W+S A+ RNV+ L    
Sbjct: 88  KAKRKIFMNSVERVLLLRDSSNIEKFTL---SCGIDDATRTRTWVSAAVNRNVKELCVNF 144

Query: 400 ---GATEFFHT------------------NVIRLSGYV-----RTLEFKGVFFPCDDGSD 299
              G +E F +                   V+RLS  +     + L  + V FP D+ S 
Sbjct: 145 YEGGESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHVVFP-DEDST 203

Query: 298 DGVLNMDLVNVEHLLFEDCGYCNVKKLVVNAPALKSLMI---DTYDKRLNHSTVVKICCP 128
             +LN  L  +E L      + N+K + ++AP L+SL I      D R + +  V I   
Sbjct: 204 QQILN--LRTLEKLKISYYDWKNLKAITISAPKLRSLDICEMHRNDLRGSDACHVMIFGT 261

Query: 127 KMVVILCKGYMFKDYTLENCGNVVIA 50
            +      G  + DY L    ++V A
Sbjct: 262 ALTFFSFSGGFWDDYCLFKSSSLVEA 287


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