BLASTX nr result

ID: Coptis25_contig00025088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025088
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD16007.1| putative 6-4 photolyase (UVR3) [Oryza sativa Jap...    45   3e-09
ref|NP_001046243.2| Os02g0204400 [Oryza sativa Japonica Group] g...    45   3e-09
gb|EEE56527.1| hypothetical protein OsJ_05816 [Oryza sativa Japo...    45   3e-09
gb|EEC72708.1| hypothetical protein OsI_06300 [Oryza sativa Indi...    45   3e-09
ref|XP_003571518.1| PREDICTED: (6-4)DNA photolyase-like [Brachyp...    45   3e-09

>dbj|BAD16007.1| putative 6-4 photolyase (UVR3) [Oryza sativa Japonica Group]
           gi|51536259|dbj|BAD38427.1| putative 6-4 photolyase
           (UVR3) [Oryza sativa Japonica Group]
          Length = 560

 Score = 44.7 bits (104), Expect(2) = 3e-09
 Identities = 20/27 (74%), Positives = 20/27 (74%)
 Frame = -1

Query: 127 GWMHHLARRSVACFLTRGSLVHSLGKG 47
           GWMHHLAR SVACFLTRG L     KG
Sbjct: 380 GWMHHLARHSVACFLTRGDLFIHWEKG 406



 Score = 41.6 bits (96), Expect(2) = 3e-09
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = -2

Query: 66  FIHWEKGRDTFD*LPIDSDWA 4
           FIHWEKGRD F+ L IDSDWA
Sbjct: 400 FIHWEKGRDVFERLLIDSDWA 420


>ref|NP_001046243.2| Os02g0204400 [Oryza sativa Japonica Group]
           gi|306756329|sp|Q0E2Y1.1|UVR3_ORYSJ RecName:
           Full=(6-4)DNA photolyase gi|255670698|dbj|BAF08157.2|
           Os02g0204400 [Oryza sativa Japonica Group]
          Length = 551

 Score = 44.7 bits (104), Expect(2) = 3e-09
 Identities = 20/27 (74%), Positives = 20/27 (74%)
 Frame = -1

Query: 127 GWMHHLARRSVACFLTRGSLVHSLGKG 47
           GWMHHLAR SVACFLTRG L     KG
Sbjct: 371 GWMHHLARHSVACFLTRGDLFIHWEKG 397



 Score = 41.6 bits (96), Expect(2) = 3e-09
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = -2

Query: 66  FIHWEKGRDTFD*LPIDSDWA 4
           FIHWEKGRD F+ L IDSDWA
Sbjct: 391 FIHWEKGRDVFERLLIDSDWA 411


>gb|EEE56527.1| hypothetical protein OsJ_05816 [Oryza sativa Japonica Group]
          Length = 551

 Score = 44.7 bits (104), Expect(2) = 3e-09
 Identities = 20/27 (74%), Positives = 20/27 (74%)
 Frame = -1

Query: 127 GWMHHLARRSVACFLTRGSLVHSLGKG 47
           GWMHHLAR SVACFLTRG L     KG
Sbjct: 371 GWMHHLARHSVACFLTRGDLFIHWEKG 397



 Score = 41.6 bits (96), Expect(2) = 3e-09
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = -2

Query: 66  FIHWEKGRDTFD*LPIDSDWA 4
           FIHWEKGRD F+ L IDSDWA
Sbjct: 391 FIHWEKGRDVFERLLIDSDWA 411


>gb|EEC72708.1| hypothetical protein OsI_06300 [Oryza sativa Indica Group]
          Length = 551

 Score = 44.7 bits (104), Expect(2) = 3e-09
 Identities = 20/27 (74%), Positives = 20/27 (74%)
 Frame = -1

Query: 127 GWMHHLARRSVACFLTRGSLVHSLGKG 47
           GWMHHLAR SVACFLTRG L     KG
Sbjct: 371 GWMHHLARHSVACFLTRGDLFIHWEKG 397



 Score = 41.6 bits (96), Expect(2) = 3e-09
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = -2

Query: 66  FIHWEKGRDTFD*LPIDSDWA 4
           FIHWEKGRD F+ L IDSDWA
Sbjct: 391 FIHWEKGRDVFERLLIDSDWA 411


>ref|XP_003571518.1| PREDICTED: (6-4)DNA photolyase-like [Brachypodium distachyon]
          Length = 547

 Score = 44.7 bits (104), Expect(2) = 3e-09
 Identities = 20/27 (74%), Positives = 20/27 (74%)
 Frame = -1

Query: 127 GWMHHLARRSVACFLTRGSLVHSLGKG 47
           GWMHHLAR SVACFLTRG L     KG
Sbjct: 368 GWMHHLARHSVACFLTRGDLFIHWEKG 394



 Score = 41.6 bits (96), Expect(2) = 3e-09
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = -2

Query: 66  FIHWEKGRDTFD*LPIDSDWA 4
           FIHWEKGRD F+ L IDSDWA
Sbjct: 388 FIHWEKGRDVFERLLIDSDWA 408


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