BLASTX nr result
ID: Coptis25_contig00025084
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025084 (229 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAG30708.1| decrease in DNA methylation 1b [Brassica rapa] 122 3e-26 gb|AAP92713.1| Swi2/Snf2-related protein DDM1 [Arabidopsis arenosa] 122 3e-26 gb|AAX22755.1| SWI2/SNF2-like protein [Arabidopsis thaliana] 121 7e-26 gb|AAX22754.1| SWI2/SNF2-like protein [Arabidopsis thaliana] 121 7e-26 ref|NP_201476.1| chromatin remodeling 1 [Arabidopsis thaliana] g... 121 7e-26 >dbj|BAG30708.1| decrease in DNA methylation 1b [Brassica rapa] Length = 766 Score = 122 bits (306), Expect = 3e-26 Identities = 56/69 (81%), Positives = 62/69 (89%) Frame = -1 Query: 208 FTPSINAIVYHGDKKVRDE*RRKYMPRNAGPEFLIVITSYEVAMNDARRCLRHYQWKYVV 29 FTPSINAI+YHGDKK RDE RRK+MP+ GP+F IVITSYEVAMNDAR+ LRHY WKYVV Sbjct: 270 FTPSINAIIYHGDKKKRDELRRKHMPKTVGPKFPIVITSYEVAMNDARKNLRHYPWKYVV 329 Query: 28 VDEGHRLKN 2 +DEGHRLKN Sbjct: 330 IDEGHRLKN 338 >gb|AAP92713.1| Swi2/Snf2-related protein DDM1 [Arabidopsis arenosa] Length = 764 Score = 122 bits (306), Expect = 3e-26 Identities = 56/69 (81%), Positives = 62/69 (89%) Frame = -1 Query: 208 FTPSINAIVYHGDKKVRDE*RRKYMPRNAGPEFLIVITSYEVAMNDARRCLRHYQWKYVV 29 FTPSINAI+YHGDKK RDE RRK+MP+ GP+F IVITSYEVAMNDA+R LRHY WKYVV Sbjct: 272 FTPSINAIIYHGDKKQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRNLRHYPWKYVV 331 Query: 28 VDEGHRLKN 2 +DEGHRLKN Sbjct: 332 IDEGHRLKN 340 >gb|AAX22755.1| SWI2/SNF2-like protein [Arabidopsis thaliana] Length = 698 Score = 121 bits (303), Expect = 7e-26 Identities = 55/69 (79%), Positives = 61/69 (88%) Frame = -1 Query: 208 FTPSINAIVYHGDKKVRDE*RRKYMPRNAGPEFLIVITSYEVAMNDARRCLRHYQWKYVV 29 FTPSINAI+YHGDK RDE RRK+MP+ GP+F IVITSYEVAMNDA+R LRHY WKYVV Sbjct: 229 FTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWKYVV 288 Query: 28 VDEGHRLKN 2 +DEGHRLKN Sbjct: 289 IDEGHRLKN 297 >gb|AAX22754.1| SWI2/SNF2-like protein [Arabidopsis thaliana] Length = 705 Score = 121 bits (303), Expect = 7e-26 Identities = 55/69 (79%), Positives = 61/69 (88%) Frame = -1 Query: 208 FTPSINAIVYHGDKKVRDE*RRKYMPRNAGPEFLIVITSYEVAMNDARRCLRHYQWKYVV 29 FTPSINAI+YHGDK RDE RRK+MP+ GP+F IVITSYEVAMNDA+R LRHY WKYVV Sbjct: 229 FTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWKYVV 288 Query: 28 VDEGHRLKN 2 +DEGHRLKN Sbjct: 289 IDEGHRLKN 297 >ref|NP_201476.1| chromatin remodeling 1 [Arabidopsis thaliana] gi|75338558|sp|Q9XFH4.1|DDM1_ARATH RecName: Full=ATP-dependent DNA helicase DDM1; AltName: Full=Protein CHROMATIN REMODELING 1; Short=CHR01; AltName: Full=Protein DECREASED DNA METHYLATION 1; Short=AtDDM1; AltName: Full=Protein SOMNIFEROUS 1; AltName: Full=SWI/SNF2-related matrix-associated actin-dependent regulator of chromatin DDM1 gi|4726079|gb|AAD28303.1|AF143940_1 SWI2/SNF2-like protein [Arabidopsis thaliana] gi|8843733|dbj|BAA97281.1| SWI2/SNF2-like protein [Arabidopsis thaliana] gi|20466344|gb|AAM20489.1| SWI2/SNF2-like protein [Arabidopsis thaliana] gi|25084090|gb|AAN72172.1| SWI2/SNF2-like protein [Arabidopsis thaliana] gi|332010876|gb|AED98259.1| chromatin remodeling 1 [Arabidopsis thaliana] Length = 764 Score = 121 bits (303), Expect = 7e-26 Identities = 55/69 (79%), Positives = 61/69 (88%) Frame = -1 Query: 208 FTPSINAIVYHGDKKVRDE*RRKYMPRNAGPEFLIVITSYEVAMNDARRCLRHYQWKYVV 29 FTPSINAI+YHGDK RDE RRK+MP+ GP+F IVITSYEVAMNDA+R LRHY WKYVV Sbjct: 272 FTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWKYVV 331 Query: 28 VDEGHRLKN 2 +DEGHRLKN Sbjct: 332 IDEGHRLKN 340