BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025084
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG30708.1| decrease in DNA methylation 1b [Brassica rapa]        122   3e-26
gb|AAP92713.1| Swi2/Snf2-related protein DDM1 [Arabidopsis arenosa]   122   3e-26
gb|AAX22755.1| SWI2/SNF2-like protein [Arabidopsis thaliana]          121   7e-26
gb|AAX22754.1| SWI2/SNF2-like protein [Arabidopsis thaliana]          121   7e-26
ref|NP_201476.1| chromatin remodeling 1 [Arabidopsis thaliana] g...   121   7e-26

>dbj|BAG30708.1| decrease in DNA methylation 1b [Brassica rapa]
          Length = 766

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/69 (81%), Positives = 62/69 (89%)
 Frame = -1

Query: 208 FTPSINAIVYHGDKKVRDE*RRKYMPRNAGPEFLIVITSYEVAMNDARRCLRHYQWKYVV 29
           FTPSINAI+YHGDKK RDE RRK+MP+  GP+F IVITSYEVAMNDAR+ LRHY WKYVV
Sbjct: 270 FTPSINAIIYHGDKKKRDELRRKHMPKTVGPKFPIVITSYEVAMNDARKNLRHYPWKYVV 329

Query: 28  VDEGHRLKN 2
           +DEGHRLKN
Sbjct: 330 IDEGHRLKN 338


>gb|AAP92713.1| Swi2/Snf2-related protein DDM1 [Arabidopsis arenosa]
          Length = 764

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/69 (81%), Positives = 62/69 (89%)
 Frame = -1

Query: 208 FTPSINAIVYHGDKKVRDE*RRKYMPRNAGPEFLIVITSYEVAMNDARRCLRHYQWKYVV 29
           FTPSINAI+YHGDKK RDE RRK+MP+  GP+F IVITSYEVAMNDA+R LRHY WKYVV
Sbjct: 272 FTPSINAIIYHGDKKQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRNLRHYPWKYVV 331

Query: 28  VDEGHRLKN 2
           +DEGHRLKN
Sbjct: 332 IDEGHRLKN 340


>gb|AAX22755.1| SWI2/SNF2-like protein [Arabidopsis thaliana]
          Length = 698

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/69 (79%), Positives = 61/69 (88%)
 Frame = -1

Query: 208 FTPSINAIVYHGDKKVRDE*RRKYMPRNAGPEFLIVITSYEVAMNDARRCLRHYQWKYVV 29
           FTPSINAI+YHGDK  RDE RRK+MP+  GP+F IVITSYEVAMNDA+R LRHY WKYVV
Sbjct: 229 FTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWKYVV 288

Query: 28  VDEGHRLKN 2
           +DEGHRLKN
Sbjct: 289 IDEGHRLKN 297


>gb|AAX22754.1| SWI2/SNF2-like protein [Arabidopsis thaliana]
          Length = 705

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/69 (79%), Positives = 61/69 (88%)
 Frame = -1

Query: 208 FTPSINAIVYHGDKKVRDE*RRKYMPRNAGPEFLIVITSYEVAMNDARRCLRHYQWKYVV 29
           FTPSINAI+YHGDK  RDE RRK+MP+  GP+F IVITSYEVAMNDA+R LRHY WKYVV
Sbjct: 229 FTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWKYVV 288

Query: 28  VDEGHRLKN 2
           +DEGHRLKN
Sbjct: 289 IDEGHRLKN 297


>ref|NP_201476.1| chromatin remodeling 1 [Arabidopsis thaliana]
           gi|75338558|sp|Q9XFH4.1|DDM1_ARATH RecName:
           Full=ATP-dependent DNA helicase DDM1; AltName:
           Full=Protein CHROMATIN REMODELING 1; Short=CHR01;
           AltName: Full=Protein DECREASED DNA METHYLATION 1;
           Short=AtDDM1; AltName: Full=Protein SOMNIFEROUS 1;
           AltName: Full=SWI/SNF2-related matrix-associated
           actin-dependent regulator of chromatin DDM1
           gi|4726079|gb|AAD28303.1|AF143940_1 SWI2/SNF2-like
           protein [Arabidopsis thaliana]
           gi|8843733|dbj|BAA97281.1| SWI2/SNF2-like protein
           [Arabidopsis thaliana] gi|20466344|gb|AAM20489.1|
           SWI2/SNF2-like protein [Arabidopsis thaliana]
           gi|25084090|gb|AAN72172.1| SWI2/SNF2-like protein
           [Arabidopsis thaliana] gi|332010876|gb|AED98259.1|
           chromatin remodeling 1 [Arabidopsis thaliana]
          Length = 764

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/69 (79%), Positives = 61/69 (88%)
 Frame = -1

Query: 208 FTPSINAIVYHGDKKVRDE*RRKYMPRNAGPEFLIVITSYEVAMNDARRCLRHYQWKYVV 29
           FTPSINAI+YHGDK  RDE RRK+MP+  GP+F IVITSYEVAMNDA+R LRHY WKYVV
Sbjct: 272 FTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWKYVV 331

Query: 28  VDEGHRLKN 2
           +DEGHRLKN
Sbjct: 332 IDEGHRLKN 340