BLASTX nr result

ID: Coptis25_contig00025083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025083
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516907.1| conserved hypothetical protein [Ricinus comm...   148   5e-34
ref|XP_002315557.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_002339831.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_002330346.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
ref|XP_003550251.1| PREDICTED: uncharacterized protein LOC100812...   144   1e-32

>ref|XP_002516907.1| conserved hypothetical protein [Ricinus communis]
           gi|223543995|gb|EEF45521.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 112

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/91 (78%), Positives = 80/91 (87%), Gaps = 7/91 (7%)
 Frame = -3

Query: 416 ESMDG-------RRKVLVHKPSNEVITSYSVLERKLYALGWERYYDDPDLYQFHKQTSID 258
           ES+DG       RRKVLVH PSNE+ITSYSVLE KLY+LGWERYYDDPDL QFHK++++ 
Sbjct: 21  ESLDGSRQGSTARRKVLVHTPSNEIITSYSVLEHKLYSLGWERYYDDPDLLQFHKRSTVH 80

Query: 257 LISLPKDFNKFKSVHMYDIVVKNRNMFEVRD 165
           LISLPKDF+KFKS+HMYDIVVKNRNMFEVRD
Sbjct: 81  LISLPKDFSKFKSMHMYDIVVKNRNMFEVRD 111


>ref|XP_002315557.1| predicted protein [Populus trichocarpa] gi|222864597|gb|EEF01728.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/91 (78%), Positives = 80/91 (87%), Gaps = 7/91 (7%)
 Frame = -3

Query: 416 ESMDG-------RRKVLVHKPSNEVITSYSVLERKLYALGWERYYDDPDLYQFHKQTSID 258
           ES+DG       RRKVLVH PSNEVITSY+VLERKLY+LGWERYYDDPDL QFHK++++ 
Sbjct: 21  ESLDGSRQGSSMRRKVLVHSPSNEVITSYAVLERKLYSLGWERYYDDPDLLQFHKRSTVH 80

Query: 257 LISLPKDFNKFKSVHMYDIVVKNRNMFEVRD 165
           LISLPKDFNK +S+HMYDIVVKNRNMFEVRD
Sbjct: 81  LISLPKDFNKLRSMHMYDIVVKNRNMFEVRD 111


>ref|XP_002339831.1| predicted protein [Populus trichocarpa] gi|222832325|gb|EEE70802.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/91 (78%), Positives = 80/91 (87%), Gaps = 7/91 (7%)
 Frame = -3

Query: 416 ESMDG-------RRKVLVHKPSNEVITSYSVLERKLYALGWERYYDDPDLYQFHKQTSID 258
           ES+DG       RRKVLVH PSNEVITSY+VLERKLY+LGWERYYDDPDL QFHK++++ 
Sbjct: 17  ESLDGSRQGSSMRRKVLVHSPSNEVITSYAVLERKLYSLGWERYYDDPDLLQFHKRSTVH 76

Query: 257 LISLPKDFNKFKSVHMYDIVVKNRNMFEVRD 165
           LISLPKDFNK +S+HMYDIVVKNRNMFEVRD
Sbjct: 77  LISLPKDFNKLRSMHMYDIVVKNRNMFEVRD 107


>ref|XP_002330346.1| predicted protein [Populus trichocarpa] gi|222871550|gb|EEF08681.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/91 (78%), Positives = 79/91 (86%), Gaps = 7/91 (7%)
 Frame = -3

Query: 416 ESMDG-------RRKVLVHKPSNEVITSYSVLERKLYALGWERYYDDPDLYQFHKQTSID 258
           ES+DG       RRKVLVH PSNEVITSY+VLERKL +LGWERYYDDPDL QFH ++++ 
Sbjct: 21  ESLDGSRQGSNTRRKVLVHTPSNEVITSYAVLERKLSSLGWERYYDDPDLLQFHIRSTVH 80

Query: 257 LISLPKDFNKFKSVHMYDIVVKNRNMFEVRD 165
           LISLPKDFNKFKS+HMYDIVVKNRNMFEVRD
Sbjct: 81  LISLPKDFNKFKSMHMYDIVVKNRNMFEVRD 111


>ref|XP_003550251.1| PREDICTED: uncharacterized protein LOC100812106 [Glycine max]
          Length = 109

 Score =  144 bits (362), Expect = 1e-32
 Identities = 66/83 (79%), Positives = 76/83 (91%)
 Frame = -3

Query: 413 SMDGRRKVLVHKPSNEVITSYSVLERKLYALGWERYYDDPDLYQFHKQTSIDLISLPKDF 234
           S  GRRKVLVH+ SNEVITSY+VLERKLY+LGWERYYDDPDL QFHK++++ LISLP+DF
Sbjct: 26  SRGGRRKVLVHRASNEVITSYAVLERKLYSLGWERYYDDPDLLQFHKRSTVHLISLPRDF 85

Query: 233 NKFKSVHMYDIVVKNRNMFEVRD 165
           NKFK +HMYDIVVKN+N FEVRD
Sbjct: 86  NKFKPMHMYDIVVKNKNAFEVRD 108


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