BLASTX nr result
ID: Coptis25_contig00025081
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00025081
(459 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAK55186.1| pinene synthase [Quercus ilex] 135 1e-43
ref|XP_002267019.2| PREDICTED: myrcene synthase, chloroplastic-l... 133 3e-43
emb|CBI40171.3| unnamed protein product [Vitis vinifera] 133 3e-43
ref|XP_003634881.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synt... 132 1e-42
ref|XP_002266808.1| PREDICTED: myrcene synthase, chloroplastic [... 131 3e-42
>emb|CAK55186.1| pinene synthase [Quercus ilex]
Length = 597
Score = 135 bits (341), Expect(3) = 1e-43
Identities = 64/106 (60%), Positives = 79/106 (74%)
Frame = -2
Query: 320 LPNPLQGWAYVILKEQGWDAIPYLKQSWTDLCKSYLVEAKWYYNKYTPTFGEYLSNACIS 141
L N + A +KEQ + I YLK++W DLC+SYL+EAKWYYNKYTP+ EY+ NA IS
Sbjct: 388 LHNSVNEMALDTMKEQRFHIIKYLKKAWVDLCRSYLLEAKWYYNKYTPSLQEYIENAWIS 447
Query: 140 ISGPLLLVHIYFFIEQDITKEALECLGSCPNVIRSSSMILRLSDDL 3
IS P +LVH+YFF+ ITKEAL+CL PN+IR SS ILRL+DDL
Sbjct: 448 ISAPTILVHVYFFVTNPITKEALDCLEEYPNIIRWSSTILRLADDL 493
Score = 44.3 bits (103), Expect(3) = 1e-43
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = -1
Query: 459 KWYKKLNTMVTTIDDVYDVYGTLDELTLLRD 367
+ + K+ ++TTIDDVYDVYGTLDEL L D
Sbjct: 334 RMFTKVFALITTIDDVYDVYGTLDELELFTD 364
Score = 42.0 bits (97), Expect(3) = 1e-43
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -3
Query: 373 ERWDINTIGELLDYMKICFLTLY 305
ERWDIN + +L DYMKICFLTL+
Sbjct: 367 ERWDINAMDQLPDYMKICFLTLH 389
>ref|XP_002267019.2| PREDICTED: myrcene synthase, chloroplastic-like [Vitis vinifera]
Length = 849
Score = 133 bits (334), Expect(3) = 3e-43
Identities = 65/106 (61%), Positives = 80/106 (75%)
Frame = -2
Query: 320 LPNPLQGWAYVILKEQGWDAIPYLKQSWTDLCKSYLVEAKWYYNKYTPTFGEYLSNACIS 141
L N AY +LKEQG I YL+++W DLCKSYL+EAKWY+ +YTPT EYLSNA IS
Sbjct: 642 LYNSTNEMAYDLLKEQGSHIIAYLRKAWADLCKSYLLEAKWYHARYTPTLKEYLSNAWIS 701
Query: 140 ISGPLLLVHIYFFIEQDITKEALECLGSCPNVIRSSSMILRLSDDL 3
IS P++LVH +FF+ IT++ALECL N+IR SS+ILRLSDDL
Sbjct: 702 ISAPVILVHAFFFVTNPITEDALECLEQYCNIIRWSSIILRLSDDL 747
Score = 47.4 bits (111), Expect(3) = 3e-43
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -1
Query: 447 KLNTMVTTIDDVYDVYGTLDELTLLRDGI 361
K+N M+TTIDDVYDVYGTL+EL L D +
Sbjct: 592 KVNAMITTIDDVYDVYGTLEELELFTDAV 620
Score = 40.4 bits (93), Expect(3) = 3e-43
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3
Query: 379 AFERWDINTIGELLDYMKICFLTLY 305
A +RWDIN + +L +YMKICFL LY
Sbjct: 619 AVDRWDINAMDQLPEYMKICFLALY 643
>emb|CBI40171.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 133 bits (334), Expect(3) = 3e-43
Identities = 65/106 (61%), Positives = 80/106 (75%)
Frame = -2
Query: 320 LPNPLQGWAYVILKEQGWDAIPYLKQSWTDLCKSYLVEAKWYYNKYTPTFGEYLSNACIS 141
L N AY +LKEQG I YL+++W DLCKSYL+EAKWY+ +YTPT EYLSNA IS
Sbjct: 140 LYNSTNEMAYDLLKEQGSHIIAYLRKAWADLCKSYLLEAKWYHARYTPTLKEYLSNAWIS 199
Query: 140 ISGPLLLVHIYFFIEQDITKEALECLGSCPNVIRSSSMILRLSDDL 3
IS P++LVH +FF+ IT++ALECL N+IR SS+ILRLSDDL
Sbjct: 200 ISAPVILVHAFFFVTNPITEDALECLEQYCNIIRWSSIILRLSDDL 245
Score = 47.4 bits (111), Expect(3) = 3e-43
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -1
Query: 447 KLNTMVTTIDDVYDVYGTLDELTLLRDGI 361
K+N M+TTIDDVYDVYGTL+EL L D +
Sbjct: 90 KVNAMITTIDDVYDVYGTLEELELFTDAV 118
Score = 40.4 bits (93), Expect(3) = 3e-43
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3
Query: 379 AFERWDINTIGELLDYMKICFLTLY 305
A +RWDIN + +L +YMKICFL LY
Sbjct: 117 AVDRWDINAMDQLPEYMKICFLALY 141
>ref|XP_003634881.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synthase,
chloroplastic-like [Vitis vinifera]
Length = 594
Score = 132 bits (331), Expect(3) = 1e-42
Identities = 66/106 (62%), Positives = 77/106 (72%)
Frame = -2
Query: 320 LPNPLQGWAYVILKEQGWDAIPYLKQSWTDLCKSYLVEAKWYYNKYTPTFGEYLSNACIS 141
L N + AY LKE G I YL+++W DLCKSYL+EAKWYYN YTPT EY+SNA IS
Sbjct: 380 LYNSISEMAYDALKEHGLHIISYLRKAWADLCKSYLLEAKWYYNGYTPTLQEYISNAWIS 439
Query: 140 ISGPLLLVHIYFFIEQDITKEALECLGSCPNVIRSSSMILRLSDDL 3
ISGPL L+H YFF+ ITKEA + L ++IR SSMILRLSDDL
Sbjct: 440 ISGPLTLIHGYFFVANSITKEASQSLQRYHSIIRWSSMILRLSDDL 485
Score = 47.8 bits (112), Expect(3) = 1e-42
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -1
Query: 447 KLNTMVTTIDDVYDVYGTLDELTLLRDGI 361
K+NT+VT IDDVYDVYGTLDEL L D +
Sbjct: 330 KVNTLVTIIDDVYDVYGTLDELELFTDAV 358
Score = 39.3 bits (90), Expect(3) = 1e-42
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3
Query: 379 AFERWDINTIGELLDYMKICFLTLY 305
A +RWDIN + +L YMK+CFL LY
Sbjct: 357 AVDRWDINAVDQLPKYMKLCFLALY 381
>ref|XP_002266808.1| PREDICTED: myrcene synthase, chloroplastic [Vitis vinifera]
Length = 590
Score = 131 bits (329), Expect(3) = 3e-42
Identities = 64/106 (60%), Positives = 79/106 (74%)
Frame = -2
Query: 320 LPNPLQGWAYVILKEQGWDAIPYLKQSWTDLCKSYLVEAKWYYNKYTPTFGEYLSNACIS 141
L N AY +LKEQG I YL+++W DLCKSYL+EAKWY+ +YTPT EYLSNA IS
Sbjct: 383 LYNSTNEMAYDLLKEQGSHIIAYLRKAWADLCKSYLLEAKWYHARYTPTLQEYLSNAWIS 442
Query: 140 ISGPLLLVHIYFFIEQDITKEALECLGSCPNVIRSSSMILRLSDDL 3
IS P +LVH +FF+ IT++ALEC+ N+IR SS+ILRLSDDL
Sbjct: 443 ISAPTILVHAFFFVTNPITEDALECVEQYCNIIRWSSIILRLSDDL 488
Score = 46.2 bits (108), Expect(3) = 3e-42
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -1
Query: 447 KLNTMVTTIDDVYDVYGTLDELTLLRDGI 361
K+N ++TTIDDVYDVYGTL+EL L D +
Sbjct: 333 KVNALITTIDDVYDVYGTLEELELFTDAV 361
Score = 40.4 bits (93), Expect(3) = 3e-42
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3
Query: 379 AFERWDINTIGELLDYMKICFLTLY 305
A +RWDIN + +L +YMKICFL LY
Sbjct: 360 AVDRWDINAMDQLPEYMKICFLALY 384