BLASTX nr result

ID: Coptis25_contig00025072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025072
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_195677.2| glycolipid transfer protein [Arabidopsis thalia...   269   7e-70
ref|XP_002866875.1| hypothetical protein ARALYDRAFT_912448 [Arab...   268   1e-69
ref|XP_002282300.2| PREDICTED: uncharacterized protein LOC100256...   267   2e-69
emb|CBI27031.3| unnamed protein product [Vitis vinifera]              267   2e-69
ref|XP_004168882.1| PREDICTED: glycolipid transfer protein domai...   261   1e-67

>ref|NP_195677.2| glycolipid transfer protein [Arabidopsis thaliana]
           gi|22022510|gb|AAM83214.1| AT4g39670/T19P19_60
           [Arabidopsis thaliana] gi|23308251|gb|AAN18095.1|
           At4g39670/T19P19_60 [Arabidopsis thaliana]
           gi|332661701|gb|AEE87101.1| glycolipid transfer protein
           [Arabidopsis thaliana]
          Length = 229

 Score =  269 bits (687), Expect = 7e-70
 Identities = 131/170 (77%), Positives = 151/170 (88%)
 Frame = -3

Query: 845 FTDACRLVSVLFNCLGIAFKFAEMEYVAKVRGLVEASKTYETLNNILDHDVEHDTVRKPG 666
           F  AC  VSVLFNCLG AFKFAEMEY+AKV+ LVEASKT+ETL+NILD DVE +TV+ PG
Sbjct: 60  FCSACTHVSVLFNCLGFAFKFAEMEYIAKVKDLVEASKTFETLHNILDLDVEKETVKTPG 119

Query: 665 SLSRNLRRVRQGLDLIRALFEQFLSADECSLREAASSAYAQVCAPYHTWAVRTAVFAGMY 486
           S SRNLRRVRQGLDLIRA+FEQFL AD+ SL++AA++AY +VCAP+HTWAVRTAV+AGMY
Sbjct: 120 SHSRNLRRVRQGLDLIRAIFEQFLIADDYSLKDAATTAYTEVCAPFHTWAVRTAVYAGMY 179

Query: 485 ALPSREQLLLKLNETDQSVEKEMRRYMAASLPVIDYIDKLYISRNITLDW 336
            LP+R+QLLL+LNETDQSVEK MRRYM AS P+I+YIDKLYI RNI LDW
Sbjct: 180 TLPTRDQLLLRLNETDQSVEKNMRRYMEASRPIIEYIDKLYIERNIKLDW 229


>ref|XP_002866875.1| hypothetical protein ARALYDRAFT_912448 [Arabidopsis lyrata subsp.
           lyrata] gi|297312711|gb|EFH43134.1| hypothetical protein
           ARALYDRAFT_912448 [Arabidopsis lyrata subsp. lyrata]
          Length = 232

 Score =  268 bits (685), Expect = 1e-69
 Identities = 131/173 (75%), Positives = 151/173 (87%)
 Frame = -3

Query: 854 LIPFTDACRLVSVLFNCLGIAFKFAEMEYVAKVRGLVEASKTYETLNNILDHDVEHDTVR 675
           L  F  AC  VSVLFNCLG AFKFAEMEY+AKV+ LVEASKT++TL NILD DVE +TV+
Sbjct: 60  LCDFCSACTHVSVLFNCLGFAFKFAEMEYIAKVKDLVEASKTFDTLQNILDLDVEKETVK 119

Query: 674 KPGSLSRNLRRVRQGLDLIRALFEQFLSADECSLREAASSAYAQVCAPYHTWAVRTAVFA 495
            PGS SRNLRRVRQGLDLIRA+FEQFL AD+ SL++AA++AY +VCAP+HTWAVRTAV+A
Sbjct: 120 TPGSHSRNLRRVRQGLDLIRAIFEQFLIADDYSLKDAATTAYTEVCAPFHTWAVRTAVYA 179

Query: 494 GMYALPSREQLLLKLNETDQSVEKEMRRYMAASLPVIDYIDKLYISRNITLDW 336
           GMY LP+R+QLLL+LNETDQSVEK MRRYM AS P+I+YIDKLYI RNI LDW
Sbjct: 180 GMYTLPTRDQLLLRLNETDQSVEKNMRRYMEASRPIIEYIDKLYIERNIKLDW 232


>ref|XP_002282300.2| PREDICTED: uncharacterized protein LOC100256114 [Vitis vinifera]
          Length = 209

 Score =  267 bits (683), Expect = 2e-69
 Identities = 132/173 (76%), Positives = 154/173 (89%)
 Frame = -3

Query: 854 LIPFTDACRLVSVLFNCLGIAFKFAEMEYVAKVRGLVEASKTYETLNNILDHDVEHDTVR 675
           LI F DAC LVSVLF CLGIAFKFAE+EYV+K+R L+EASKTY+TL +I+D D+E++TVR
Sbjct: 37  LITFCDACSLVSVLFGCLGIAFKFAELEYVSKIRDLLEASKTYDTLEDIIDRDIENNTVR 96

Query: 674 KPGSLSRNLRRVRQGLDLIRALFEQFLSADECSLREAASSAYAQVCAPYHTWAVRTAVFA 495
             GS SRNLRRVRQGLDLIRALFEQFL +D+ SLREAAS+AY+QVCAPYHTWAVRTAV A
Sbjct: 97  SAGSHSRNLRRVRQGLDLIRALFEQFLLSDDFSLREAASAAYSQVCAPYHTWAVRTAVSA 156

Query: 494 GMYALPSREQLLLKLNETDQSVEKEMRRYMAASLPVIDYIDKLYISRNITLDW 336
           GMYALP REQLL++LNE  QS EK+MRRY+ ASLPVI YID+LY++RNI+LDW
Sbjct: 157 GMYALPVREQLLVRLNENGQSAEKQMRRYINASLPVIAYIDELYMARNISLDW 209


>emb|CBI27031.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  267 bits (683), Expect = 2e-69
 Identities = 132/173 (76%), Positives = 154/173 (89%)
 Frame = -3

Query: 854  LIPFTDACRLVSVLFNCLGIAFKFAEMEYVAKVRGLVEASKTYETLNNILDHDVEHDTVR 675
            LI F DAC LVSVLF CLGIAFKFAE+EYV+K+R L+EASKTY+TL +I+D D+E++TVR
Sbjct: 623  LITFCDACSLVSVLFGCLGIAFKFAELEYVSKIRDLLEASKTYDTLEDIIDRDIENNTVR 682

Query: 674  KPGSLSRNLRRVRQGLDLIRALFEQFLSADECSLREAASSAYAQVCAPYHTWAVRTAVFA 495
              GS SRNLRRVRQGLDLIRALFEQFL +D+ SLREAAS+AY+QVCAPYHTWAVRTAV A
Sbjct: 683  SAGSHSRNLRRVRQGLDLIRALFEQFLLSDDFSLREAASAAYSQVCAPYHTWAVRTAVSA 742

Query: 494  GMYALPSREQLLLKLNETDQSVEKEMRRYMAASLPVIDYIDKLYISRNITLDW 336
            GMYALP REQLL++LNE  QS EK+MRRY+ ASLPVI YID+LY++RNI+LDW
Sbjct: 743  GMYALPVREQLLVRLNENGQSAEKQMRRYINASLPVIAYIDELYMARNISLDW 795


>ref|XP_004168882.1| PREDICTED: glycolipid transfer protein domain-containing protein
           1-like, partial [Cucumis sativus]
          Length = 198

 Score =  261 bits (668), Expect = 1e-67
 Identities = 130/168 (77%), Positives = 150/168 (89%)
 Frame = -3

Query: 839 DACRLVSVLFNCLGIAFKFAEMEYVAKVRGLVEASKTYETLNNILDHDVEHDTVRKPGSL 660
           DAC LVS+LF+ LG+AFKFAE+EYV+KVR LVEASK YETL+ ILD D+ +DTV+ PGS 
Sbjct: 31  DACSLVSILFSSLGLAFKFAELEYVSKVRDLVEASKKYETLHTILDADIANDTVKTPGSH 90

Query: 659 SRNLRRVRQGLDLIRALFEQFLSADECSLREAASSAYAQVCAPYHTWAVRTAVFAGMYAL 480
           SRNLRRVRQGLDLIRALFEQF+S DE SLR+AAS+AY +VCAPYH+WAVRTAV AGMY L
Sbjct: 91  SRNLRRVRQGLDLIRALFEQFMSTDEYSLRDAASTAYTRVCAPYHSWAVRTAVSAGMYTL 150

Query: 479 PSREQLLLKLNETDQSVEKEMRRYMAASLPVIDYIDKLYISRNITLDW 336
           P+REQLLLKLNET+QS EK+MRRY+ AS PVI+YIDKLYISR I+LDW
Sbjct: 151 PTREQLLLKLNETNQSAEKKMRRYINASGPVIEYIDKLYISRKISLDW 198


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