BLASTX nr result

ID: Coptis25_contig00025064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025064
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]   311   2e-82
dbj|BAJ53153.1| JHL23J11.8 [Jatropha curcas]                          302   1e-79
ref|XP_002514782.1| chromatin assembly factor 1, subunit A, puta...   301   3e-79
ref|XP_003551692.1| PREDICTED: uncharacterized protein LOC100802...   293   8e-77
ref|XP_003533580.1| PREDICTED: uncharacterized protein LOC100811...   285   2e-74

>emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]
          Length = 872

 Score =  311 bits (798), Expect = 2e-82
 Identities = 179/352 (50%), Positives = 214/352 (60%), Gaps = 31/352 (8%)
 Frame = +2

Query: 2    AYYGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEEEENLMEGN 181
            A+YG    KS ++GPRCP KKD  L                 SLSDCDKD+EEE++ EG 
Sbjct: 507  AFYGIWPKKSQIVGPRCPFKKDXDLDYDIDSDEEWEEEDPGESLSDCDKDDEEESVEEGC 566

Query: 182  LKIDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEGDNTRSSPRCNQDLENDEFRALFR 361
            LK DD++ SEDDF VPDGYLSENEGVQVD METD   +  RSSP C  + E++EF  L R
Sbjct: 567  LKGDDDE-SEDDFMVPDGYLSENEGVQVDKMETDPTVEEARSSPGCRTEFESEEFCVLLR 625

Query: 362  QQKHINNLTEHALQKNQPLIISNLMHEKTQLI-AEDLNGTAKLEHMFLQALSLRPFPGSS 538
            QQKH++NLTE AL+KNQPLII NLMHEK  L+ AEDL+GT KLE M LQALS+  FPG  
Sbjct: 626  QQKHLHNLTERALRKNQPLIILNLMHEKIPLLMAEDLSGTPKLEQMCLQALSMCAFPGGP 685

Query: 539  PIEILTENNKLDEDEELQELHCXXXXXXXXXXXXXXDKDLPKIVSLIQSCPHRIGKVVES 718
             IEI   N+  DED+E    +               D DLPKIV+ IQ+C   I K+VES
Sbjct: 686  LIEISVTNDLQDEDKEACLSNSRSSTTPVSTGMAIVDSDLPKIVATIQACTQGINKLVES 745

Query: 719  LRRSFPDVPKSHLKSKVQEISEFVDNRW------------------------------KV 808
            L+  FP +PKS L++KV+EIS+FVDNRW                              KV
Sbjct: 746  LQLKFPAIPKSQLRNKVREISDFVDNRWQGQDPPRHSYQAVISIELYAPLSRLFMAMSKV 805

Query: 809  KKEVLGKLGFSISPGKSIENSRGIATFFSKRCLPPTGGPMKTDETSPQQCCK 964
            KK+VL KLG SISP K    ++ IA FFSKRCLPP+       +TSPQQ  K
Sbjct: 806  KKDVLHKLGLSISPEKG-GRTKSIAAFFSKRCLPPSNRISGPSKTSPQQTQK 856


>dbj|BAJ53153.1| JHL23J11.8 [Jatropha curcas]
          Length = 846

 Score =  302 bits (774), Expect = 1e-79
 Identities = 167/322 (51%), Positives = 209/322 (64%), Gaps = 1/322 (0%)
 Frame = +2

Query: 2    AYYGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEEEENLMEGN 181
            A+YG    KS V+GPR P +K+P L                 SLSDCDKD+EE++L EG 
Sbjct: 510  AFYGIWPKKSHVVGPRHPFRKEPDLDYDVDSDEEWEEEDPGESLSDCDKDDEEQSLEEGC 569

Query: 182  LKIDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEGDNTRSSPRCNQDLENDEFRALFR 361
             K DDE+ SED FFVPDGYLSENEGVQVD MET+   +  R SP   QD E++EF  L +
Sbjct: 570  SK-DDEEESEDGFFVPDGYLSENEGVQVDRMETELSVEKARGSPSSKQDSESEEFCKLLQ 628

Query: 362  QQKHINNLTEHALQKNQPLIISNLMHEKTQL-IAEDLNGTAKLEHMFLQALSLRPFPGSS 538
            QQK++NN+TE AL+KNQPLII NLMHEK  L +AEDL GT+KLE   L+AL +R FPG  
Sbjct: 629  QQKYLNNVTETALRKNQPLIILNLMHEKVPLFVAEDLTGTSKLEWTCLEALRVRKFPGGP 688

Query: 539  PIEILTENNKLDEDEELQELHCXXXXXXXXXXXXXXDKDLPKIVSLIQSCPHRIGKVVES 718
             +EI T + + +  E     +               + D+P +VS IQSC   I KVV+S
Sbjct: 689  SMEISTVDIQAEAREACVS-NGKTNSTHVSPAAAIPELDMPIVVSTIQSCSQSINKVVDS 747

Query: 719  LRRSFPDVPKSHLKSKVQEISEFVDNRWKVKKEVLGKLGFSISPGKSIENSRGIATFFSK 898
            L++ FP V KS L++KV+EIS+FVDNRW+VKKEVL ++G SISP KS      I+TFFSK
Sbjct: 748  LQQKFPTVSKSQLRNKVREISDFVDNRWQVKKEVLNEVGISISPRKSRGRMPNISTFFSK 807

Query: 899  RCLPPTGGPMKTDETSPQQCCK 964
            RCLPPTG  M  +E SP+   K
Sbjct: 808  RCLPPTGKSMNPNENSPESSLK 829


>ref|XP_002514782.1| chromatin assembly factor 1, subunit A, putative [Ricinus communis]
            gi|223545833|gb|EEF47336.1| chromatin assembly factor 1,
            subunit A, putative [Ricinus communis]
          Length = 823

 Score =  301 bits (770), Expect = 3e-79
 Identities = 165/318 (51%), Positives = 207/318 (65%), Gaps = 1/318 (0%)
 Frame = +2

Query: 2    AYYGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEEEENLMEGN 181
            A+YG    KS V+GPR P +K+P L                 SLSDCDKD+EE++L EG 
Sbjct: 492  AFYGIWPKKSHVVGPRHPFRKEPDLDYDVDSDEEWEEEDPGESLSDCDKDDEEQSLEEGC 551

Query: 182  LKIDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEGDNTRSSPRCNQDLENDEFRALFR 361
            LK DDED SED FFVPDGYLSENEGV+VD +ETD   D  R +P C Q+LEN+EFR L +
Sbjct: 552  LK-DDEDESEDGFFVPDGYLSENEGVEVDRLETDLSVDEARGTPSCKQELENEEFRTLLQ 610

Query: 362  QQKHINNLTEHALQKNQPLIISNLMHEKTQL-IAEDLNGTAKLEHMFLQALSLRPFPGSS 538
             QK++NNLTE AL+KNQPLII NLMHEK  L  A+DL GT K E M L+ALS+R  PG  
Sbjct: 611  WQKYLNNLTEIALRKNQPLIILNLMHEKDPLSAAKDLTGTFKSEKMCLEALSMRMNPGGL 670

Query: 539  PIEILTENNKLDEDEELQELHCXXXXXXXXXXXXXXDKDLPKIVSLIQSCPHRIGKVVES 718
            P+EI +  + L ED++                    + D+P +VS IQS  H I KVVE 
Sbjct: 671  PVEI-SVVDMLAEDQDACLSIVKASNTHISAVTTIQESDMPIVVSAIQSGSHSINKVVEL 729

Query: 719  LRRSFPDVPKSHLKSKVQEISEFVDNRWKVKKEVLGKLGFSISPGKSIENSRGIATFFSK 898
            L++ FP V KS +++KV+EIS+FVDNRW+VKKE+L K+G SISP K     + I+ FFSK
Sbjct: 730  LQQKFPTVSKSQIRNKVREISDFVDNRWQVKKEILDKVGISISPEKGGGRMQNISKFFSK 789

Query: 899  RCLPPTGGPMKTDETSPQ 952
            RCLPP    +  + TSP+
Sbjct: 790  RCLPPAAESINPEATSPE 807


>ref|XP_003551692.1| PREDICTED: uncharacterized protein LOC100802884 [Glycine max]
          Length = 838

 Score =  293 bits (749), Expect = 8e-77
 Identities = 166/316 (52%), Positives = 202/316 (63%)
 Frame = +2

Query: 2    AYYGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEEEENLMEGN 181
            A+YG    KS V+GPR PL+KDP L                 SLSDCDKDEEE    E  
Sbjct: 508  AFYGVWPAKSHVVGPRHPLRKDPSLDYDVSSDEEWEEEEPGESLSDCDKDEEE--CQEEC 565

Query: 182  LKIDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEGDNTRSSPRCNQDLENDEFRALFR 361
             K D+E  SED FFVPDGYLSE+EG QVD ME D + D   SSP C  D+E++EF AL R
Sbjct: 566  TKSDEE--SEDGFFVPDGYLSEDEGAQVDRMEIDDDIDGADSSPSCKNDIESEEFCALLR 623

Query: 362  QQKHINNLTEHALQKNQPLIISNLMHEKTQLIAEDLNGTAKLEHMFLQALSLRPFPGSSP 541
            QQK++NNLTEHAL+KNQPLIISNL+++K      +++GT KLE M LQALS+   PG S 
Sbjct: 624  QQKYLNNLTEHALRKNQPLIISNLINDKDLSSDHNISGTPKLEQMCLQALSMYVIPGISC 683

Query: 542  IEILTENNKLDEDEELQELHCXXXXXXXXXXXXXXDKDLPKIVSLIQSCPHRIGKVVESL 721
            IEI  +  + DED+E+                   D DLP IV+ IQSC   + KV+ SL
Sbjct: 684  IEIYVDKMQ-DEDQEVCLSTGKSGASPISGVAVIPDSDLPIIVTTIQSCSQGMNKVLVSL 742

Query: 722  RRSFPDVPKSHLKSKVQEISEFVDNRWKVKKEVLGKLGFSISPGKSIENSRGIATFFSKR 901
            ++ FP V KS LK+KV+E+S++VDNR +VKKEVL KLG ++ P KS    R IA FFSKR
Sbjct: 743  QQKFPSVSKSLLKNKVREVSDYVDNRLQVKKEVLDKLGSAVKPEKSSGGPRSIAAFFSKR 802

Query: 902  CLPPTGGPMKTDETSP 949
            CLPPTG   K  ETSP
Sbjct: 803  CLPPTGEGSKPGETSP 818


>ref|XP_003533580.1| PREDICTED: uncharacterized protein LOC100811035 [Glycine max]
          Length = 844

 Score =  285 bits (729), Expect = 2e-74
 Identities = 162/316 (51%), Positives = 200/316 (63%)
 Frame = +2

Query: 2    AYYGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEEEENLMEGN 181
            A+YG    KS V+G R PL+KDP L                 SLSDCDKDEEE    E  
Sbjct: 515  AFYGVWPAKSHVVGARHPLRKDPSLDYEVSSDEEWEEEEPGESLSDCDKDEEE--CQEEC 572

Query: 182  LKIDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEGDNTRSSPRCNQDLENDEFRALFR 361
             K D+E  SED FFVPDGYLSE+EG QVD M+ D + +   SSP C  D+E +EF AL R
Sbjct: 573  TKSDEE--SEDGFFVPDGYLSEDEGAQVDRMQIDDDIEGADSSPSCKNDIEIEEFCALLR 630

Query: 362  QQKHINNLTEHALQKNQPLIISNLMHEKTQLIAEDLNGTAKLEHMFLQALSLRPFPGSSP 541
            QQK++NNLTEHAL+KNQPLIISNL+++K      +++GT KLE M LQ LS+   PG S 
Sbjct: 631  QQKYLNNLTEHALRKNQPLIISNLINDKDLSSDHNISGTPKLEQMCLQVLSMYVIPGISC 690

Query: 542  IEILTENNKLDEDEELQELHCXXXXXXXXXXXXXXDKDLPKIVSLIQSCPHRIGKVVESL 721
            IEI +E+   DED+E+                   D DLP IV+ IQSC   + KV+ SL
Sbjct: 691  IEI-SEDKMQDEDQEVCLSTGKGVASLISGVAVIPDSDLPIIVTTIQSCSQGMNKVLVSL 749

Query: 722  RRSFPDVPKSHLKSKVQEISEFVDNRWKVKKEVLGKLGFSISPGKSIENSRGIATFFSKR 901
            ++ FP V KS LK+KV+E+S++VDNR +VKKEVL KLG ++ P KS    + IA FFSKR
Sbjct: 750  QQKFPSVSKSLLKNKVREVSDYVDNRLQVKKEVLDKLGLAVKPEKSSVGPKSIAAFFSKR 809

Query: 902  CLPPTGGPMKTDETSP 949
            CLPPTG   K  ETSP
Sbjct: 810  CLPPTGEGAKPGETSP 825


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