BLASTX nr result
ID: Coptis25_contig00025058
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025058 (634 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ... 221 7e-56 ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putati... 221 9e-56 ref|XP_003553864.1| PREDICTED: COP9 signalosome complex subunit ... 213 3e-53 ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ... 211 9e-53 ref|XP_003553865.1| PREDICTED: COP9 signalosome complex subunit ... 210 2e-52 >ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera] gi|296090247|emb|CBI40066.3| unnamed protein product [Vitis vinifera] Length = 424 Score = 221 bits (564), Expect = 7e-56 Identities = 115/192 (59%), Positives = 141/192 (73%) Frame = -1 Query: 577 MESVEKLVNEIQGLSNPRDDLKHLPSLLKKQEGXXXXXXXXXXXXXLDQLDPFLHSLGYL 398 M+SVE +V +IQGLS D+ L SLLK Q L+QLDP +H+LGYL Sbjct: 1 MDSVEAVVTQIQGLSGGSGDISLLHSLLK-QADDLLHNESTRLAPFLEQLDPSIHTLGYL 59 Query: 397 YVLKAYTSAVSISKQQASGLVSTIARFIDSCEGEQIRLVPDKFISVCRRLKDELLLLKMP 218 Y+L+A TS I K+QA+ LV +IA FI++C EQI L PDKF+S+C+RLKD+++LL+ P Sbjct: 60 YLLEACTST-PIPKEQANQLVLSIANFINNCSAEQIHLAPDKFVSLCKRLKDQVILLEAP 118 Query: 217 MRGVAPLRTAIYKLQPSFGKLTTLHPDFLLLCLSAKCYKTGYSILDEDIFETDQPRDLFL 38 MRGVAP+ TA+ KLQ + LT LHPDFLLLCL AKCYKTG IL++DIFE DQPRD FL Sbjct: 119 MRGVAPMLTAVRKLQSASELLTVLHPDFLLLCLLAKCYKTGLCILEDDIFEVDQPRDFFL 178 Query: 37 YCYYGGMICIGQ 2 YCYYGGMICIGQ Sbjct: 179 YCYYGGMICIGQ 190 >ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis] gi|223549455|gb|EEF50943.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis] Length = 427 Score = 221 bits (563), Expect = 9e-56 Identities = 114/190 (60%), Positives = 138/190 (72%) Frame = -1 Query: 571 SVEKLVNEIQGLSNPRDDLKHLPSLLKKQEGXXXXXXXXXXXXXLDQLDPFLHSLGYLYV 392 S+E LV +IQGLS+ D+ L + LK+ + LDQLDP +HSLGYLY Sbjct: 5 SIESLVTQIQGLSSSATDISALHNYLKQADDSLHSDSPTRLLPFLDQLDPSVHSLGYLYF 64 Query: 391 LKAYTSAVSISKQQASGLVSTIARFIDSCEGEQIRLVPDKFISVCRRLKDELLLLKMPMR 212 L+A TS ISK+QA LV +ARF+ SC +QIRL PDKFISVC+R KD+++LL+ PMR Sbjct: 65 LEACTSG-PISKEQARTLVLILARFVTSCAADQIRLAPDKFISVCKRFKDQVMLLEEPMR 123 Query: 211 GVAPLRTAIYKLQPSFGKLTTLHPDFLLLCLSAKCYKTGYSILDEDIFETDQPRDLFLYC 32 GVAPL A+ KLQ S LTTLHP+FL LCL +KCYKTG SIL++DIFE DQPRDLFLY Sbjct: 124 GVAPLLAAVRKLQSSSVHLTTLHPEFLQLCLLSKCYKTGLSILEDDIFEVDQPRDLFLYS 183 Query: 31 YYGGMICIGQ 2 YYGGM+CIGQ Sbjct: 184 YYGGMVCIGQ 193 >ref|XP_003553864.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1 [Glycine max] Length = 423 Score = 213 bits (541), Expect = 3e-53 Identities = 112/192 (58%), Positives = 138/192 (71%) Frame = -1 Query: 577 MESVEKLVNEIQGLSNPRDDLKHLPSLLKKQEGXXXXXXXXXXXXXLDQLDPFLHSLGYL 398 M+ +E LV +IQGLS+ DL L S+LK Q L QLDP +HSLG+L Sbjct: 1 MDPLEALVAQIQGLSSTPGDLTRLHSVLK-QADDSLRSESTRLAPILTQLDPSIHSLGFL 59 Query: 397 YVLKAYTSAVSISKQQASGLVSTIARFIDSCEGEQIRLVPDKFISVCRRLKDELLLLKMP 218 Y+L+A + ++K QA +V + RFI +C EQIRL PDKF+SVC+RLKD+++LL+ P Sbjct: 60 YILEA-SMTDPVTKTQAETVVPIVTRFIGACSPEQIRLAPDKFLSVCKRLKDQVMLLEAP 118 Query: 217 MRGVAPLRTAIYKLQPSFGKLTTLHPDFLLLCLSAKCYKTGYSILDEDIFETDQPRDLFL 38 +RGVAPL TA+ KLQ S LT LH +FLLLCL AKCYKTG SILD+D+FE DQPRDLFL Sbjct: 119 IRGVAPLFTALRKLQVSTEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFL 178 Query: 37 YCYYGGMICIGQ 2 YCYYGGMICIGQ Sbjct: 179 YCYYGGMICIGQ 190 >ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2 [Glycine max] Length = 423 Score = 211 bits (537), Expect = 9e-53 Identities = 111/192 (57%), Positives = 137/192 (71%) Frame = -1 Query: 577 MESVEKLVNEIQGLSNPRDDLKHLPSLLKKQEGXXXXXXXXXXXXXLDQLDPFLHSLGYL 398 M+ +E LV +IQGLS+ DL L ++LK Q L QLDP +HSLG+L Sbjct: 1 MDPLEALVAQIQGLSSSPGDLTRLHTVLK-QADDSLRSESTRLAPILTQLDPSIHSLGFL 59 Query: 397 YVLKAYTSAVSISKQQASGLVSTIARFIDSCEGEQIRLVPDKFISVCRRLKDELLLLKMP 218 Y+L+A + ++K QA +V + RFI +C EQIRL PDKF+SVCRRLKD+++LL+ P Sbjct: 60 YILEASMTG-PVTKTQAEVVVPIVTRFIGACSTEQIRLAPDKFLSVCRRLKDQVMLLEAP 118 Query: 217 MRGVAPLRTAIYKLQPSFGKLTTLHPDFLLLCLSAKCYKTGYSILDEDIFETDQPRDLFL 38 +RGVAPL A+ KLQ S LT LH +FLLLCL AKCYKTG SILD+D+FE DQPRDLFL Sbjct: 119 IRGVAPLFNALRKLQASAEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFL 178 Query: 37 YCYYGGMICIGQ 2 YCYYGGMICIGQ Sbjct: 179 YCYYGGMICIGQ 190 >ref|XP_003553865.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2 [Glycine max] Length = 425 Score = 210 bits (534), Expect = 2e-52 Identities = 111/190 (58%), Positives = 136/190 (71%) Frame = -1 Query: 571 SVEKLVNEIQGLSNPRDDLKHLPSLLKKQEGXXXXXXXXXXXXXLDQLDPFLHSLGYLYV 392 S + LV +IQGLS+ DL L S+LK Q L QLDP +HSLG+LY+ Sbjct: 5 SFQALVAQIQGLSSTPGDLTRLHSVLK-QADDSLRSESTRLAPILTQLDPSIHSLGFLYI 63 Query: 391 LKAYTSAVSISKQQASGLVSTIARFIDSCEGEQIRLVPDKFISVCRRLKDELLLLKMPMR 212 L+A + ++K QA +V + RFI +C EQIRL PDKF+SVC+RLKD+++LL+ P+R Sbjct: 64 LEA-SMTDPVTKTQAETVVPIVTRFIGACSPEQIRLAPDKFLSVCKRLKDQVMLLEAPIR 122 Query: 211 GVAPLRTAIYKLQPSFGKLTTLHPDFLLLCLSAKCYKTGYSILDEDIFETDQPRDLFLYC 32 GVAPL TA+ KLQ S LT LH +FLLLCL AKCYKTG SILD+D+FE DQPRDLFLYC Sbjct: 123 GVAPLFTALRKLQVSTEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFLYC 182 Query: 31 YYGGMICIGQ 2 YYGGMICIGQ Sbjct: 183 YYGGMICIGQ 192