BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025058
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ...   221   7e-56
ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putati...   221   9e-56
ref|XP_003553864.1| PREDICTED: COP9 signalosome complex subunit ...   213   3e-53
ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ...   211   9e-53
ref|XP_003553865.1| PREDICTED: COP9 signalosome complex subunit ...   210   2e-52

>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
           gi|296090247|emb|CBI40066.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score =  221 bits (564), Expect = 7e-56
 Identities = 115/192 (59%), Positives = 141/192 (73%)
 Frame = -1

Query: 577 MESVEKLVNEIQGLSNPRDDLKHLPSLLKKQEGXXXXXXXXXXXXXLDQLDPFLHSLGYL 398
           M+SVE +V +IQGLS    D+  L SLLK Q               L+QLDP +H+LGYL
Sbjct: 1   MDSVEAVVTQIQGLSGGSGDISLLHSLLK-QADDLLHNESTRLAPFLEQLDPSIHTLGYL 59

Query: 397 YVLKAYTSAVSISKQQASGLVSTIARFIDSCEGEQIRLVPDKFISVCRRLKDELLLLKMP 218
           Y+L+A TS   I K+QA+ LV +IA FI++C  EQI L PDKF+S+C+RLKD+++LL+ P
Sbjct: 60  YLLEACTST-PIPKEQANQLVLSIANFINNCSAEQIHLAPDKFVSLCKRLKDQVILLEAP 118

Query: 217 MRGVAPLRTAIYKLQPSFGKLTTLHPDFLLLCLSAKCYKTGYSILDEDIFETDQPRDLFL 38
           MRGVAP+ TA+ KLQ +   LT LHPDFLLLCL AKCYKTG  IL++DIFE DQPRD FL
Sbjct: 119 MRGVAPMLTAVRKLQSASELLTVLHPDFLLLCLLAKCYKTGLCILEDDIFEVDQPRDFFL 178

Query: 37  YCYYGGMICIGQ 2
           YCYYGGMICIGQ
Sbjct: 179 YCYYGGMICIGQ 190


>ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
           gi|223549455|gb|EEF50943.1| 26S proteasome regulatory
           subunit S3, putative [Ricinus communis]
          Length = 427

 Score =  221 bits (563), Expect = 9e-56
 Identities = 114/190 (60%), Positives = 138/190 (72%)
 Frame = -1

Query: 571 SVEKLVNEIQGLSNPRDDLKHLPSLLKKQEGXXXXXXXXXXXXXLDQLDPFLHSLGYLYV 392
           S+E LV +IQGLS+   D+  L + LK+ +              LDQLDP +HSLGYLY 
Sbjct: 5   SIESLVTQIQGLSSSATDISALHNYLKQADDSLHSDSPTRLLPFLDQLDPSVHSLGYLYF 64

Query: 391 LKAYTSAVSISKQQASGLVSTIARFIDSCEGEQIRLVPDKFISVCRRLKDELLLLKMPMR 212
           L+A TS   ISK+QA  LV  +ARF+ SC  +QIRL PDKFISVC+R KD+++LL+ PMR
Sbjct: 65  LEACTSG-PISKEQARTLVLILARFVTSCAADQIRLAPDKFISVCKRFKDQVMLLEEPMR 123

Query: 211 GVAPLRTAIYKLQPSFGKLTTLHPDFLLLCLSAKCYKTGYSILDEDIFETDQPRDLFLYC 32
           GVAPL  A+ KLQ S   LTTLHP+FL LCL +KCYKTG SIL++DIFE DQPRDLFLY 
Sbjct: 124 GVAPLLAAVRKLQSSSVHLTTLHPEFLQLCLLSKCYKTGLSILEDDIFEVDQPRDLFLYS 183

Query: 31  YYGGMICIGQ 2
           YYGGM+CIGQ
Sbjct: 184 YYGGMVCIGQ 193


>ref|XP_003553864.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1
           [Glycine max]
          Length = 423

 Score =  213 bits (541), Expect = 3e-53
 Identities = 112/192 (58%), Positives = 138/192 (71%)
 Frame = -1

Query: 577 MESVEKLVNEIQGLSNPRDDLKHLPSLLKKQEGXXXXXXXXXXXXXLDQLDPFLHSLGYL 398
           M+ +E LV +IQGLS+   DL  L S+LK Q               L QLDP +HSLG+L
Sbjct: 1   MDPLEALVAQIQGLSSTPGDLTRLHSVLK-QADDSLRSESTRLAPILTQLDPSIHSLGFL 59

Query: 397 YVLKAYTSAVSISKQQASGLVSTIARFIDSCEGEQIRLVPDKFISVCRRLKDELLLLKMP 218
           Y+L+A +    ++K QA  +V  + RFI +C  EQIRL PDKF+SVC+RLKD+++LL+ P
Sbjct: 60  YILEA-SMTDPVTKTQAETVVPIVTRFIGACSPEQIRLAPDKFLSVCKRLKDQVMLLEAP 118

Query: 217 MRGVAPLRTAIYKLQPSFGKLTTLHPDFLLLCLSAKCYKTGYSILDEDIFETDQPRDLFL 38
           +RGVAPL TA+ KLQ S   LT LH +FLLLCL AKCYKTG SILD+D+FE DQPRDLFL
Sbjct: 119 IRGVAPLFTALRKLQVSTEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFL 178

Query: 37  YCYYGGMICIGQ 2
           YCYYGGMICIGQ
Sbjct: 179 YCYYGGMICIGQ 190


>ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2
           [Glycine max]
          Length = 423

 Score =  211 bits (537), Expect = 9e-53
 Identities = 111/192 (57%), Positives = 137/192 (71%)
 Frame = -1

Query: 577 MESVEKLVNEIQGLSNPRDDLKHLPSLLKKQEGXXXXXXXXXXXXXLDQLDPFLHSLGYL 398
           M+ +E LV +IQGLS+   DL  L ++LK Q               L QLDP +HSLG+L
Sbjct: 1   MDPLEALVAQIQGLSSSPGDLTRLHTVLK-QADDSLRSESTRLAPILTQLDPSIHSLGFL 59

Query: 397 YVLKAYTSAVSISKQQASGLVSTIARFIDSCEGEQIRLVPDKFISVCRRLKDELLLLKMP 218
           Y+L+A  +   ++K QA  +V  + RFI +C  EQIRL PDKF+SVCRRLKD+++LL+ P
Sbjct: 60  YILEASMTG-PVTKTQAEVVVPIVTRFIGACSTEQIRLAPDKFLSVCRRLKDQVMLLEAP 118

Query: 217 MRGVAPLRTAIYKLQPSFGKLTTLHPDFLLLCLSAKCYKTGYSILDEDIFETDQPRDLFL 38
           +RGVAPL  A+ KLQ S   LT LH +FLLLCL AKCYKTG SILD+D+FE DQPRDLFL
Sbjct: 119 IRGVAPLFNALRKLQASAEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFL 178

Query: 37  YCYYGGMICIGQ 2
           YCYYGGMICIGQ
Sbjct: 179 YCYYGGMICIGQ 190


>ref|XP_003553865.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2
           [Glycine max]
          Length = 425

 Score =  210 bits (534), Expect = 2e-52
 Identities = 111/190 (58%), Positives = 136/190 (71%)
 Frame = -1

Query: 571 SVEKLVNEIQGLSNPRDDLKHLPSLLKKQEGXXXXXXXXXXXXXLDQLDPFLHSLGYLYV 392
           S + LV +IQGLS+   DL  L S+LK Q               L QLDP +HSLG+LY+
Sbjct: 5   SFQALVAQIQGLSSTPGDLTRLHSVLK-QADDSLRSESTRLAPILTQLDPSIHSLGFLYI 63

Query: 391 LKAYTSAVSISKQQASGLVSTIARFIDSCEGEQIRLVPDKFISVCRRLKDELLLLKMPMR 212
           L+A +    ++K QA  +V  + RFI +C  EQIRL PDKF+SVC+RLKD+++LL+ P+R
Sbjct: 64  LEA-SMTDPVTKTQAETVVPIVTRFIGACSPEQIRLAPDKFLSVCKRLKDQVMLLEAPIR 122

Query: 211 GVAPLRTAIYKLQPSFGKLTTLHPDFLLLCLSAKCYKTGYSILDEDIFETDQPRDLFLYC 32
           GVAPL TA+ KLQ S   LT LH +FLLLCL AKCYKTG SILD+D+FE DQPRDLFLYC
Sbjct: 123 GVAPLFTALRKLQVSTEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFLYC 182

Query: 31  YYGGMICIGQ 2
           YYGGMICIGQ
Sbjct: 183 YYGGMICIGQ 192