BLASTX nr result

ID: Coptis25_contig00025049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025049
         (1393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267888.1| PREDICTED: uncharacterized protein LOC100248...   397   e-108
ref|XP_002522492.1| conserved hypothetical protein [Ricinus comm...   393   e-107
ref|XP_003556759.1| PREDICTED: uncharacterized protein LOC100789...   382   e-103
ref|XP_003528573.1| PREDICTED: uncharacterized protein LOC100806...   380   e-103
ref|XP_002312265.1| predicted protein [Populus trichocarpa] gi|2...   378   e-102

>ref|XP_002267888.1| PREDICTED: uncharacterized protein LOC100248804 [Vitis vinifera]
          Length = 347

 Score =  397 bits (1019), Expect = e-108
 Identities = 207/316 (65%), Positives = 244/316 (77%)
 Frame = +3

Query: 72   DSMNAMEILRETIRILRYNCPGFMVIAALLICPVSAIILSNVLVDQSFFKRLTIRLLLVA 251
            D MNA++ILRET+ ILRYN  GFM+IAALLICPVSA++LSNVLVDQS  KRL+IRLLLVA
Sbjct: 36   DPMNALQILRETVWILRYNSSGFMLIAALLICPVSALLLSNVLVDQSIVKRLSIRLLLVA 95

Query: 252  QSCGLPLSNLIKHLCQRLSEIILTAIFSVPLHITFSLLSKAAVVYMVDCTYSRNKFYTGK 431
            +S GLPL   IK  CQ+ SE+ ++A    PL+ T SLLSKAAVVY VDC+YSR KF + K
Sbjct: 96   RSSGLPLRPFIKQSCQKFSEMAISAATCFPLYFTISLLSKAAVVYSVDCSYSRKKFDSSK 155

Query: 432  FFGIILKIWRRLVSTYVWVSMIXXXXXXXXXXXXXXXXXXXXXXHFSSELEIYPAMVIAF 611
            F+ I++KIWRRLVSTY+WV M+                       F  +L +Y A+++  
Sbjct: 156  FYVIVVKIWRRLVSTYLWVCMLIVSCLTVFLVTLIAVCNVFLIIGFPGDLIVYAAIMVGL 215

Query: 612  VFSIIFANVIIICNLAIVISVLEDVCGPQALLRSSVIIQGQTQVGLLIFLGSTIGMAFVE 791
            +FS++FA  IIICN+AIVI VLE+V GPQALLRS V+I+GQTQVGLLIFLGSTIGMAFVE
Sbjct: 216  IFSVVFAKAIIICNIAIVICVLEEVSGPQALLRSGVLIKGQTQVGLLIFLGSTIGMAFVE 275

Query: 792  GLFEHRVKTLSYGDGSSRIWEGPLLVIMYSFVVLIDSMMSAVFYFACRSSSMEGLEQESQ 971
            GLFEHRVKTLSYGDGSSR+WEGPLLV+MYSFVVLIDSMMSAVFYF+CRSSS E L+ E  
Sbjct: 276  GLFEHRVKTLSYGDGSSRVWEGPLLVVMYSFVVLIDSMMSAVFYFSCRSSSREALDGEIH 335

Query: 972  TILEATAPSSGSVDIQ 1019
             ILE  A    S+DIQ
Sbjct: 336  PILETPA----SMDIQ 347


>ref|XP_002522492.1| conserved hypothetical protein [Ricinus communis]
            gi|223538377|gb|EEF39984.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 363

 Score =  393 bits (1010), Expect = e-107
 Identities = 205/320 (64%), Positives = 237/320 (74%)
 Frame = +3

Query: 60   NERFDSMNAMEILRETIRILRYNCPGFMVIAALLICPVSAIILSNVLVDQSFFKRLTIRL 239
            N +F SMNA+EILRET+RILR N   FM+IAALLICPVSAI+LSNV VDQS  KRLTIRL
Sbjct: 44   NHQFHSMNALEILRETVRILRCNSSSFMIIAALLICPVSAIVLSNVFVDQSIVKRLTIRL 103

Query: 240  LLVAQSCGLPLSNLIKHLCQRLSEIILTAIFSVPLHITFSLLSKAAVVYMVDCTYSRNKF 419
            LLVA+S GLPL   +K  C  LSE+ + +    PL IT SLLSKAAVVY VDCTYSR   
Sbjct: 104  LLVAKSSGLPLRPFVKQSCHHLSEMAIASAMYFPLFITLSLLSKAAVVYSVDCTYSRQNI 163

Query: 420  YTGKFFGIILKIWRRLVSTYVWVSMIXXXXXXXXXXXXXXXXXXXXXXHFSSELEIYPAM 599
               KF GI+ KIWRR+VSTY W  M+                       F   L +Y  +
Sbjct: 164  DVSKFIGIMSKIWRRVVSTYWWACMMIVGCITLFCVLLLAICSLLSVIGFPPALNLYAGI 223

Query: 600  VIAFVFSIIFANVIIICNLAIVISVLEDVCGPQALLRSSVIIQGQTQVGLLIFLGSTIGM 779
            ++  VFS++FAN I+ICN+AIVISVLEDV GPQALLRSS++I+GQTQVGLLI+LGSTIG+
Sbjct: 224  LVGLVFSVVFANAIVICNIAIVISVLEDVSGPQALLRSSILIRGQTQVGLLIYLGSTIGL 283

Query: 780  AFVEGLFEHRVKTLSYGDGSSRIWEGPLLVIMYSFVVLIDSMMSAVFYFACRSSSMEGLE 959
            AFVEGLFEHRVKTLSYGDGSSRIWEGPLLVIMYSFVVLID MMSA+FYF+CRS   E  +
Sbjct: 284  AFVEGLFEHRVKTLSYGDGSSRIWEGPLLVIMYSFVVLIDLMMSAIFYFSCRSYRTEASD 343

Query: 960  QESQTILEATAPSSGSVDIQ 1019
             ESQ+ILE  + S  SV +Q
Sbjct: 344  AESQSILETISISDESVGVQ 363


>ref|XP_003556759.1| PREDICTED: uncharacterized protein LOC100789016 [Glycine max]
          Length = 328

 Score =  382 bits (980), Expect = e-103
 Identities = 195/320 (60%), Positives = 242/320 (75%)
 Frame = +3

Query: 60   NERFDSMNAMEILRETIRILRYNCPGFMVIAALLICPVSAIILSNVLVDQSFFKRLTIRL 239
            N +  SMNA+EILRET+RILR+N  GFM IA +LICPVSA++LSNV+VD+S  K L+IRL
Sbjct: 9    NFQVQSMNALEILRETVRILRFNSWGFMAIAFMLICPVSAVLLSNVIVDESIVKNLSIRL 68

Query: 240  LLVAQSCGLPLSNLIKHLCQRLSEIILTAIFSVPLHITFSLLSKAAVVYMVDCTYSRNKF 419
            +LVAQ+ GLPL  +IK  CQR +E ++++    P + T  LLSKAAVVY VDCTYSR KF
Sbjct: 69   MLVAQTSGLPLRPIIKQSCQRFAETVVSSAMCFPFYATLLLLSKAAVVYSVDCTYSRKKF 128

Query: 420  YTGKFFGIILKIWRRLVSTYVWVSMIXXXXXXXXXXXXXXXXXXXXXXHFSSELEIYPAM 599
               KF  I+ K WR+++ TY+WV  +                       F  ++ +Y AM
Sbjct: 129  DASKFCVIVAKFWRKILFTYMWVCTVIVCCITLFCVFLVAFCSALAVLGFLPDVVVYCAM 188

Query: 600  VIAFVFSIIFANVIIICNLAIVISVLEDVCGPQALLRSSVIIQGQTQVGLLIFLGSTIGM 779
            ++  VFS++FAN IIICN+A+VISVLEDV G QA+LRSS++I+GQTQVGLLIFLGSTIGM
Sbjct: 189  LVGLVFSVVFANAIIICNIAMVISVLEDVSGAQAMLRSSILIKGQTQVGLLIFLGSTIGM 248

Query: 780  AFVEGLFEHRVKTLSYGDGSSRIWEGPLLVIMYSFVVLIDSMMSAVFYFACRSSSMEGLE 959
            AFVEGLFEHRVKTLSYGDGSSR+WEGPLLV+MYSFVVLIDSMMSAVFYF+CRSS+ME  +
Sbjct: 249  AFVEGLFEHRVKTLSYGDGSSRVWEGPLLVVMYSFVVLIDSMMSAVFYFSCRSSNMEISD 308

Query: 960  QESQTILEATAPSSGSVDIQ 1019
             E ++ILE  A S+ S+ IQ
Sbjct: 309  VEGKSILETMAISAESMGIQ 328


>ref|XP_003528573.1| PREDICTED: uncharacterized protein LOC100806351 [Glycine max]
          Length = 357

 Score =  380 bits (977), Expect = e-103
 Identities = 195/320 (60%), Positives = 240/320 (75%)
 Frame = +3

Query: 60   NERFDSMNAMEILRETIRILRYNCPGFMVIAALLICPVSAIILSNVLVDQSFFKRLTIRL 239
            N +  SMNA+EILRETIRILR+N  GFM IA +LICPVSA++LSNV+VD+S  K L+IRL
Sbjct: 38   NYQIQSMNALEILRETIRILRFNSWGFMAIAFMLICPVSAVLLSNVIVDESIVKNLSIRL 97

Query: 240  LLVAQSCGLPLSNLIKHLCQRLSEIILTAIFSVPLHITFSLLSKAAVVYMVDCTYSRNKF 419
            +LVAQ+ GLPL  +IK  CQR +E ++++    P + T  LLSKAAVVY VDCTYSR K 
Sbjct: 98   MLVAQTSGLPLRPIIKQSCQRFAETVVSSAMCFPFYATLLLLSKAAVVYSVDCTYSRKKV 157

Query: 420  YTGKFFGIILKIWRRLVSTYVWVSMIXXXXXXXXXXXXXXXXXXXXXXHFSSELEIYPAM 599
               KF  I+ K WR+++ TY+WV  +                       FS ++ +Y AM
Sbjct: 158  DASKFCVIVAKFWRKILFTYMWVCTVVVGCITLFCVFLVAFCSALAVLGFSPDVVVYCAM 217

Query: 600  VIAFVFSIIFANVIIICNLAIVISVLEDVCGPQALLRSSVIIQGQTQVGLLIFLGSTIGM 779
            ++  VFS++FA  IIICN+A+VISVLEDV G QA+LRSS++I+GQTQVGLLIFLGSTIGM
Sbjct: 218  LVGLVFSVVFAKAIIICNIAMVISVLEDVSGAQAMLRSSILIKGQTQVGLLIFLGSTIGM 277

Query: 780  AFVEGLFEHRVKTLSYGDGSSRIWEGPLLVIMYSFVVLIDSMMSAVFYFACRSSSMEGLE 959
            AFVEGLFEHRVKTLSYGDGSSR+WEGPLLV+MYSFVVLIDSMMSAVFYF+CRSS+ME  +
Sbjct: 278  AFVEGLFEHRVKTLSYGDGSSRVWEGPLLVVMYSFVVLIDSMMSAVFYFSCRSSNMEISD 337

Query: 960  QESQTILEATAPSSGSVDIQ 1019
             E ++ILE  A S+ SV  Q
Sbjct: 338  SEGKSILETMAISAESVGFQ 357


>ref|XP_002312265.1| predicted protein [Populus trichocarpa] gi|222852085|gb|EEE89632.1|
            predicted protein [Populus trichocarpa]
          Length = 360

 Score =  378 bits (971), Expect = e-102
 Identities = 204/321 (63%), Positives = 234/321 (72%)
 Frame = +3

Query: 54   SINERFDSMNAMEILRETIRILRYNCPGFMVIAALLICPVSAIILSNVLVDQSFFKRLTI 233
            S N +F S +A++ILRET RILR N   FM IAALLICPVSAI+LSNVLVDQS  KRL+ 
Sbjct: 39   SHNLQFYSTSALDILRETARILRCNSWSFMTIAALLICPVSAILLSNVLVDQSIVKRLST 98

Query: 234  RLLLVAQSCGLPLSNLIKHLCQRLSEIILTAIFSVPLHITFSLLSKAAVVYMVDCTYSRN 413
            RLLLVA S GLPL  LIK LC R +E+ +++    PL IT SLLS+AAVVY VDCTYSR 
Sbjct: 99   RLLLVANSSGLPLRPLIKQLCHRFAEMAVSSATCFPLFITLSLLSRAAVVYSVDCTYSRK 158

Query: 414  KFYTGKFFGIILKIWRRLVSTYVWVSMIXXXXXXXXXXXXXXXXXXXXXXHFSSELEIYP 593
                 KF  +I KIWRR+VSTY+W  M+                       F  EL +Y 
Sbjct: 159  DVDGSKFLAMISKIWRRIVSTYLWSCMVIVGCLTLFFVLLLAVCSTFLVLGFWPELNLYA 218

Query: 594  AMVIAFVFSIIFANVIIICNLAIVISVLEDVCGPQALLRSSVIIQGQTQVGLLIFLGSTI 773
            AM++  VFS+IFAN II+CN+A+VISVL DV GPQALLRSSV+I+GQTQVGLLIFLGSTI
Sbjct: 219  AMIVGLVFSVIFANAIIVCNIAVVISVLVDVSGPQALLRSSVLIRGQTQVGLLIFLGSTI 278

Query: 774  GMAFVEGLFEHRVKTLSYGDGSSRIWEGPLLVIMYSFVVLIDSMMSAVFYFACRSSSMEG 953
            GMAF+EGLFEHRVKTLSYGDGSSRIWEGPLLVIMYSFVVLID MMSAVFY++CRS  ME 
Sbjct: 279  GMAFIEGLFEHRVKTLSYGDGSSRIWEGPLLVIMYSFVVLIDLMMSAVFYYSCRSHGMEA 338

Query: 954  LEQESQTILEATAPSSGSVDI 1016
             + E   IL     S+ SV I
Sbjct: 339  SDGECLAILGTVTVSAESVGI 359


Top