BLASTX nr result

ID: Coptis25_contig00025041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025041
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334907.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-12
ref|XP_002529883.1| transcription factor, putative [Ricinus comm...    73   2e-11
ref|XP_002271515.2| PREDICTED: probable lysine-specific demethyl...    72   5e-11
emb|CBI39010.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_002317068.1| jumonji domain protein [Populus trichocarpa]...    71   9e-11

>ref|XP_002334907.1| predicted protein [Populus trichocarpa] gi|222832172|gb|EEE70649.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 70.9 bits (172), Expect(2) = 2e-12
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +3

Query: 411 GEYWRIVEKPSEEVEVYYGADLETGIFGSGFPKASCLVNKCDLD 542
           GEYWRIVEKP++EV+V YGADLET  FGSGFPKAS L+ + D D
Sbjct: 218 GEYWRIVEKPTDEVKVLYGADLETATFGSGFPKASALMTEGDSD 261



 Score = 26.6 bits (57), Expect(2) = 2e-12
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 346 QDRMDDTKPTSVGIPSIEDIEG 411
           +D MDD   T    PS+EDIEG
Sbjct: 197 KDLMDDGNETQKWEPSVEDIEG 218


>ref|XP_002529883.1| transcription factor, putative [Ricinus communis]
           gi|223530610|gb|EEF32486.1| transcription factor,
           putative [Ricinus communis]
          Length = 935

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = +3

Query: 411 GEYWRIVEKPSEEVEVYYGADLETGIFGSGFPKASCLVNKCDLD 542
           GEYWRI+E+P++EVEVYYGADLETG FGSGFPKAS +  + D D
Sbjct: 211 GEYWRIIEQPTDEVEVYYGADLETGTFGSGFPKASSMAIEGDSD 254


>ref|XP_002271515.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
           vinifera]
          Length = 1118

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = +3

Query: 411 GEYWRIVEKPSEEVEVYYGADLETGIFGSGFPKASCLVNKCDLD 542
           GEYWRIVEKP++EVEVYYGADLET  F SGFPKAS L+++ D D
Sbjct: 254 GEYWRIVEKPTDEVEVYYGADLETEAFVSGFPKASSLISENDSD 297


>emb|CBI39010.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = +3

Query: 411 GEYWRIVEKPSEEVEVYYGADLETGIFGSGFPKASCLVNKCDLD 542
           GEYWRIVEKP++EVEVYYGADLET  F SGFPKAS L+++ D D
Sbjct: 300 GEYWRIVEKPTDEVEVYYGADLETEAFVSGFPKASSLISENDSD 343


>ref|XP_002317068.1| jumonji domain protein [Populus trichocarpa]
           gi|222860133|gb|EEE97680.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 753

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = +3

Query: 411 GEYWRIVEKPSEEVEVYYGADLETGIFGSGFPKASCLVNKCDLD 542
           GEYWRIVEKP++EV+V YGADLET  FGSGFPKAS L+ K D D
Sbjct: 183 GEYWRIVEKPTDEVKVLYGADLETVTFGSGFPKASALMTKGDSD 226


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