BLASTX nr result

ID: Coptis25_contig00025039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025039
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273695.1| PREDICTED: uncharacterized protein LOC100252...    51   4e-09
emb|CAN66102.1| hypothetical protein VITISV_041147 [Vitis vinifera]    51   4e-09
ref|XP_002525247.1| conserved hypothetical protein [Ricinus comm...    43   2e-07

>ref|XP_002273695.1| PREDICTED: uncharacterized protein LOC100252686 [Vitis vinifera]
          Length = 614

 Score = 50.8 bits (120), Expect(2) = 4e-09
 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +1

Query: 190 SNGVSLPPQPSNAKVGIEGRKA-KVSNHLEQVHALRMLQNHYLQWGY 327
           +  + LPP P   K G + RK  KVS H E VH+L++L NHYLQW +
Sbjct: 379 NGSIYLPPLPPCTKPGTDARKGRKVSGHQEDVHSLKLLHNHYLQWRF 425



 Score = 34.7 bits (78), Expect(2) = 4e-09
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 9/61 (14%)
 Frame = +2

Query: 2   RSLPDFRSSMPETDLLPNIASKFLA---------HNRDTPKVNAFSCYRSLNSPLPSCEQ 154
           RS  + RSSMPE D+LP ++++ LA         +  ++ K +A    RSLN    S +Q
Sbjct: 294 RSHNELRSSMPEADMLPTMSTRLLAERNCGRGNVNGAESSKFSASPFSRSLNLTPSSSDQ 353

Query: 155 S 157
           S
Sbjct: 354 S 354


>emb|CAN66102.1| hypothetical protein VITISV_041147 [Vitis vinifera]
          Length = 579

 Score = 50.8 bits (120), Expect(2) = 4e-09
 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +1

Query: 190 SNGVSLPPQPSNAKVGIEGRKA-KVSNHLEQVHALRMLQNHYLQWGY 327
           +  + LPP P   K G + RK  KVS H E VH+L++L NHYLQW +
Sbjct: 383 NGSIYLPPLPPCTKPGTDARKGRKVSGHQEDVHSLKLLHNHYLQWRF 429



 Score = 34.7 bits (78), Expect(2) = 4e-09
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 9/61 (14%)
 Frame = +2

Query: 2   RSLPDFRSSMPETDLLPNIASKFLA---------HNRDTPKVNAFSCYRSLNSPLPSCEQ 154
           RS  + RSSMPE D+LP ++++ LA         +  ++ K +A    RSLN    S +Q
Sbjct: 298 RSHNELRSSMPEADMLPTMSTRLLAERNCGRGNVNGAESSKFSASPFSRSLNLTPSSSDQ 357

Query: 155 S 157
           S
Sbjct: 358 S 358


>ref|XP_002525247.1| conserved hypothetical protein [Ricinus communis]
           gi|223535544|gb|EEF37213.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 504

 Score = 43.1 bits (100), Expect(2) = 2e-07
 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = +1

Query: 172 KSVHRPS----NGVSLPPQPSNAKVGIEGRKAKVSNHLEQVHALRMLQNHYLQWGY 327
           K+V +P+     G+ LPP    A V  +GRK  V +H E V +LR+L NHYLQW Y
Sbjct: 252 KTVDKPAIKKIAGLPLPP----AHVSRKGRK--VPSHQEDVQSLRLLHNHYLQWRY 301



 Score = 37.0 bits (84), Expect(2) = 2e-07
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +2

Query: 8   LPDFRSSMPETDLLPNIASKFLAHNRDTPKVNAFSCYRSLNSPL-PSCEQSFL 163
           LPD RSSMPE      I         D+ K +A  C RSL+ PL  +CE S +
Sbjct: 196 LPDIRSSMPEASSRLLIDRNISNRKNDSSKFSASPCSRSLDFPLSDTCEHSLI 248


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