BLASTX nr result
ID: Coptis25_contig00025039
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025039 (371 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273695.1| PREDICTED: uncharacterized protein LOC100252... 51 4e-09 emb|CAN66102.1| hypothetical protein VITISV_041147 [Vitis vinifera] 51 4e-09 ref|XP_002525247.1| conserved hypothetical protein [Ricinus comm... 43 2e-07 >ref|XP_002273695.1| PREDICTED: uncharacterized protein LOC100252686 [Vitis vinifera] Length = 614 Score = 50.8 bits (120), Expect(2) = 4e-09 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Frame = +1 Query: 190 SNGVSLPPQPSNAKVGIEGRKA-KVSNHLEQVHALRMLQNHYLQWGY 327 + + LPP P K G + RK KVS H E VH+L++L NHYLQW + Sbjct: 379 NGSIYLPPLPPCTKPGTDARKGRKVSGHQEDVHSLKLLHNHYLQWRF 425 Score = 34.7 bits (78), Expect(2) = 4e-09 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 9/61 (14%) Frame = +2 Query: 2 RSLPDFRSSMPETDLLPNIASKFLA---------HNRDTPKVNAFSCYRSLNSPLPSCEQ 154 RS + RSSMPE D+LP ++++ LA + ++ K +A RSLN S +Q Sbjct: 294 RSHNELRSSMPEADMLPTMSTRLLAERNCGRGNVNGAESSKFSASPFSRSLNLTPSSSDQ 353 Query: 155 S 157 S Sbjct: 354 S 354 >emb|CAN66102.1| hypothetical protein VITISV_041147 [Vitis vinifera] Length = 579 Score = 50.8 bits (120), Expect(2) = 4e-09 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Frame = +1 Query: 190 SNGVSLPPQPSNAKVGIEGRKA-KVSNHLEQVHALRMLQNHYLQWGY 327 + + LPP P K G + RK KVS H E VH+L++L NHYLQW + Sbjct: 383 NGSIYLPPLPPCTKPGTDARKGRKVSGHQEDVHSLKLLHNHYLQWRF 429 Score = 34.7 bits (78), Expect(2) = 4e-09 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 9/61 (14%) Frame = +2 Query: 2 RSLPDFRSSMPETDLLPNIASKFLA---------HNRDTPKVNAFSCYRSLNSPLPSCEQ 154 RS + RSSMPE D+LP ++++ LA + ++ K +A RSLN S +Q Sbjct: 298 RSHNELRSSMPEADMLPTMSTRLLAERNCGRGNVNGAESSKFSASPFSRSLNLTPSSSDQ 357 Query: 155 S 157 S Sbjct: 358 S 358 >ref|XP_002525247.1| conserved hypothetical protein [Ricinus communis] gi|223535544|gb|EEF37213.1| conserved hypothetical protein [Ricinus communis] Length = 504 Score = 43.1 bits (100), Expect(2) = 2e-07 Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 4/56 (7%) Frame = +1 Query: 172 KSVHRPS----NGVSLPPQPSNAKVGIEGRKAKVSNHLEQVHALRMLQNHYLQWGY 327 K+V +P+ G+ LPP A V +GRK V +H E V +LR+L NHYLQW Y Sbjct: 252 KTVDKPAIKKIAGLPLPP----AHVSRKGRK--VPSHQEDVQSLRLLHNHYLQWRY 301 Score = 37.0 bits (84), Expect(2) = 2e-07 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = +2 Query: 8 LPDFRSSMPETDLLPNIASKFLAHNRDTPKVNAFSCYRSLNSPL-PSCEQSFL 163 LPD RSSMPE I D+ K +A C RSL+ PL +CE S + Sbjct: 196 LPDIRSSMPEASSRLLIDRNISNRKNDSSKFSASPCSRSLDFPLSDTCEHSLI 248