BLASTX nr result

ID: Coptis25_contig00025038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025038
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260...   263   6e-68
ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853...   231   2e-58
emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera]   231   2e-58
ref|XP_002301140.1| predicted protein [Populus trichocarpa] gi|2...   220   6e-55
emb|CBI19365.3| unnamed protein product [Vitis vinifera]              219   1e-54

>ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260890 [Vitis vinifera]
          Length = 604

 Score =  263 bits (672), Expect = 6e-68
 Identities = 164/392 (41%), Positives = 216/392 (55%), Gaps = 13/392 (3%)
 Frame = +1

Query: 1    DGKKWRCSRDAVIDGRYCERHLNRGRQRSRKPVEGRNGQVATGPT---MKTVPVVSLSSG 171
            DGKKWRCSRDAV D +YCERH+NRGR RSRKPVEG+ G    GPT    K +P+ S SS 
Sbjct: 229  DGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEGQTGHSVPGPTTTATKLMPITSSSSA 288

Query: 172  AGISRIGVSADGIFLRSASNNLTIPQLLKRDLQLGVSHPS-ATSSNRSLVNKDNGSGPMQ 348
            + +   G           SN+L I     ++L  G S+PS AT  NR  +NK+N    MQ
Sbjct: 289  SVVPGGG----------TSNSLAIAHHQIKNLHPGASNPSAATPINRIFLNKENVGERMQ 338

Query: 349  YSAGLHLSSPTMSLNLNSTPFFMAKQGVATPFQESSGIQFGXXXXXXXXXXXXKTTYTDC 528
             + GL + S T+        F + KQ +  P++ESS   FG             +++ +C
Sbjct: 339  ETQGLSILSSTIDQKSKENQFSLPKQQI--PYEESSRAGFG--LVPSNSLLSKSSSFMNC 394

Query: 529  KNYGSSIDLNGGESQTKHPFRHFIDDWPKNKSDNSAC--------TDQTQLXXXXXXXXX 684
            +N+GSS DLN  E  ++H  RHFIDDWPKN+SD +A         +D+TQL         
Sbjct: 395  RNFGSSQDLNNHEPDSQHSLRHFIDDWPKNQSDRTAISWPDIDLQSDRTQLSISIPMASS 454

Query: 685  XXXXXXXXXMREKPNPTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPISWETSMGGP 864
                       +K   + L  S EF+PIQM LGVGS  NE  +R AN +PISWETSMGGP
Sbjct: 455  DFMSSTSSPTNDKLTLSPLRLSREFDPIQMGLGVGSVLNEPNQRQANWIPISWETSMGGP 514

Query: 865  LGEALNKTNRTAIEYKSSVPAFDFITKGWNTSSQMGSSPTGVLQRTPFXXXXXXXXXXXX 1044
            LGE L+ TN    + K+S  A + +T+GW+ S ++GSSPTGVLQ+T F            
Sbjct: 515  LGEVLHSTNNNGGDCKNS-SALNLMTEGWDGSPRLGSSPTGVLQKTSFGSLSNSSAGSSP 573

Query: 1045 REETKNV-DEDSFCNDFLVGF*TLNSWAMDNL 1137
            R   K   D  S CND L+G   +NS ++ +L
Sbjct: 574  RAGNKKTNDGASLCND-LLGSTLVNSSSLPSL 604


>ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853530 [Vitis vinifera]
          Length = 597

 Score =  231 bits (590), Expect = 2e-58
 Identities = 147/374 (39%), Positives = 199/374 (53%), Gaps = 9/374 (2%)
 Frame = +1

Query: 1    DGKKWRCSRDAVIDGRYCERHLNRGRQRSRKPVEGRNGQVATGPT-MKTVPVVSLSSGAG 177
            DGKKWRCSRDAV D +YCERH+NRGR RSRKPVEG+ G   +GPT  K VP+ S  S + 
Sbjct: 234  DGKKWRCSRDAVADQKYCERHINRGRHRSRKPVEGQTGHAVSGPTNSKVVPMPSTMSASV 293

Query: 178  ISRIGVSADGIFLRSASNNLTIPQLLKRDLQLGVSHPSATSSNRSLVNKDNGSGPMQYSA 357
            +S  G          ASN+L I Q   + LQ   ++PSA     +LVN+      +Q   
Sbjct: 294  MSSGG----------ASNSLAIAQNQFKSLQPVAANPSAD----TLVNR------LQEPQ 333

Query: 358  GLHLSSPTMSLNLNSTPFFMAKQGVATPFQESSGIQFGXXXXXXXXXXXXKTTYTDCKNY 537
            GL + SPT+ L    TPF ++K  +  PF+ES   +FG            + +Y + +NY
Sbjct: 334  GLSMISPTVDLKSRDTPFSISK--LPIPFEESPQSEFGFVSSDSLLNPSERGSYMNSRNY 391

Query: 538  GSSIDLNGGESQTKHPFRHFIDDWPKNKSDNSAC-------TDQTQLXXXXXXXXXXXXX 696
               +D +  E+Q +HPFR FIDDWPK++S+ S         +D TQL             
Sbjct: 392  TPFLDFSDQETQDQHPFRQFIDDWPKDQSNRSDIAWPEELKSDWTQLSISIPMSSSDFSS 451

Query: 697  XXXXXMREKPNPTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPISWETSMGGPLGEA 876
                  +EK   + L  S E +P+QM LGV S+ +  T++  N +PISW +SMGGPLGE 
Sbjct: 452  SSSSPTQEKLAFSPLRLSRELDPVQMGLGVSSDLSAPTQKQTNWIPISWGSSMGGPLGEV 511

Query: 877  LNKTNRTAIEYKSSVPAFDFITKGWNTSSQMGSSPTGVLQRTPFXXXXXXXXXXXXREET 1056
            L  +       K+S  A + +T+GW+ S Q+GSSPTGVLQ+  F              E 
Sbjct: 512  LTTSANNMGACKNS-SALNLMTEGWDGSPQIGSSPTGVLQKATFGSLSNSSSGSSPTTEN 570

Query: 1057 KNVDE-DSFCNDFL 1095
            K + E  S C D L
Sbjct: 571  KKIHERASHCEDML 584


>emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera]
          Length = 497

 Score =  231 bits (590), Expect = 2e-58
 Identities = 147/374 (39%), Positives = 199/374 (53%), Gaps = 9/374 (2%)
 Frame = +1

Query: 1    DGKKWRCSRDAVIDGRYCERHLNRGRQRSRKPVEGRNGQVATGPT-MKTVPVVSLSSGAG 177
            DGKKWRCSRDAV D +YCERH+NRGR RSRKPVEG+ G   +GPT  K VP+ S  S + 
Sbjct: 134  DGKKWRCSRDAVADQKYCERHINRGRHRSRKPVEGQTGHAVSGPTNSKVVPMPSTMSASV 193

Query: 178  ISRIGVSADGIFLRSASNNLTIPQLLKRDLQLGVSHPSATSSNRSLVNKDNGSGPMQYSA 357
            +S  G          ASN+L I Q   + LQ   ++PSA     +LVN+      +Q   
Sbjct: 194  MSSGG----------ASNSLAIAQNQFKSLQPVAANPSAD----TLVNR------LQEPQ 233

Query: 358  GLHLSSPTMSLNLNSTPFFMAKQGVATPFQESSGIQFGXXXXXXXXXXXXKTTYTDCKNY 537
            GL + SPT+ L    TPF ++K  +  PF+ES   +FG            + +Y + +NY
Sbjct: 234  GLSMISPTIDLKSRDTPFSISK--LPIPFEESPQSEFGFVSSDSLLNPSERGSYMNSRNY 291

Query: 538  GSSIDLNGGESQTKHPFRHFIDDWPKNKSDNSAC-------TDQTQLXXXXXXXXXXXXX 696
               +D +  E+Q +HPFR FIDDWPK++S+ S         +D TQL             
Sbjct: 292  TPFLDFSDQETQDQHPFRQFIDDWPKDQSNRSDIAWPEELKSDWTQLSISIPMSSSDFSS 351

Query: 697  XXXXXMREKPNPTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPISWETSMGGPLGEA 876
                  +EK   + L  S E +P+QM LGV S+ +  T++  N +PISW +SMGGPLGE 
Sbjct: 352  SSSSPTQEKLAFSPLRLSRELDPVQMGLGVSSDLSAPTQKQTNWIPISWGSSMGGPLGEV 411

Query: 877  LNKTNRTAIEYKSSVPAFDFITKGWNTSSQMGSSPTGVLQRTPFXXXXXXXXXXXXREET 1056
            L  +       K+S  A + +T+GW+ S Q+GSSPTGVLQ+  F              E 
Sbjct: 412  LTTSANNMGACKNS-SALNLMTEGWDGSPQIGSSPTGVLQKATFGSLSNSSSGSSPTTEN 470

Query: 1057 KNVDE-DSFCNDFL 1095
            K + E  S C D L
Sbjct: 471  KKIHERASHCEDML 484


>ref|XP_002301140.1| predicted protein [Populus trichocarpa] gi|222842866|gb|EEE80413.1|
            predicted protein [Populus trichocarpa]
          Length = 605

 Score =  220 bits (560), Expect = 6e-55
 Identities = 144/376 (38%), Positives = 199/376 (52%), Gaps = 13/376 (3%)
 Frame = +1

Query: 1    DGKKWRCSRDAVIDGRYCERHLNRGRQRSRKPVEGRNGQVATGPTMKTVPVVSLSSGAGI 180
            DGKKWRCSRDAV D +YCERH+NRGR RSRKPVEG++G  A   T         SS A  
Sbjct: 227  DGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEGQSGHSAAATTTLKPMANGTSSFASA 286

Query: 181  SRIGVSADGIFLRSA-SNNLTIPQLLKRDLQLGVSHPSATSS-NRSLVNKDNGSGPMQYS 354
            S +G       LRSA S++ TI     +      S+ SAT++ +R  +  +N    MQ +
Sbjct: 287  SVVG-------LRSAVSDSHTIVH--NQQQPASSSNLSATNTLSRVFLATENVGERMQDA 337

Query: 355  AGLHLSSPTMSLNLNSTPFFMAKQGVATPFQESSGIQFGXXXXXXXXXXXXKTT-YTDCK 531
            +GL +   ++ L    TPFF++KQ     + ES   +F             K++    C+
Sbjct: 338  SGLSMLPSSIDLKSKETPFFISKQ--QNSYGESLQNEFALVTSDSLLNHSQKSSSLMSCR 395

Query: 532  NYGSSIDLNGGESQTKHPFRHFIDDWPKNKSDNSAC--------TDQTQLXXXXXXXXXX 687
            N+GSS DL   ES ++H  R F+DD PK+ SD SA         +++TQL          
Sbjct: 396  NFGSSQDLTDQESVSQHSLRQFMDDCPKSHSDRSAVAWPGLDLQSERTQLSISIPMAPAD 455

Query: 688  XXXXXXXXMREKPNPTQLSGSHEFNPIQMSLGVGSNP--NEQTRRPANLLPISWETSMGG 861
                      EK + + L  S EF+PI+M LGVG+    NE  +R AN +PISWETSMGG
Sbjct: 456  FVSSTSSSNNEKISLSPLRLSREFDPIKMGLGVGAGSVANEPNQRQANWIPISWETSMGG 515

Query: 862  PLGEALNKTNRTAIEYKSSVPAFDFITKGWNTSSQMGSSPTGVLQRTPFXXXXXXXXXXX 1041
            PLGE L+ TN  A     +  + + +T+ W+ S ++GSSPTGVLQ++ F           
Sbjct: 516  PLGEVLHNTNNNATAECKNESSLNLMTERWDNSPRVGSSPTGVLQKSAFASLSNSSAGSS 575

Query: 1042 XREETKNVDEDSFCND 1089
             R E K ++  + CND
Sbjct: 576  PRAENKTIEGGNLCND 591


>emb|CBI19365.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  219 bits (557), Expect = 1e-54
 Identities = 150/392 (38%), Positives = 199/392 (50%), Gaps = 13/392 (3%)
 Frame = +1

Query: 1    DGKKWRCSRDAVIDGRYCERHLNRGRQRSRKPVEGRNGQVATGPT---MKTVPVVSLSSG 171
            DGKKWRCSRDAV D +YCERH+NRGR RSRKPVEG+ G    GPT    K +P+ S SS 
Sbjct: 138  DGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEGQTGHSVPGPTTTATKLMPITSSSSA 197

Query: 172  AGISRIGVSADGIFLRSASNNLTIPQLLKRDLQLGVSHPS-ATSSNRSLVNKDNGSGPMQ 348
            + +   G           SN+L I     ++L  G S+PS AT  NR  +NK+N    MQ
Sbjct: 198  SVVPGGG----------TSNSLAIAHHQIKNLHPGASNPSAATPINRIFLNKENVGERMQ 247

Query: 349  YSAGLHLSSPTMSLNLNSTPFFMAKQGVATPFQESSGIQFGXXXXXXXXXXXXKTTYTDC 528
             + GL + S T+        F + KQ +  P++ESS   FG             +++ +C
Sbjct: 248  ETQGLSILSSTIDQKSKENQFSLPKQQI--PYEESSRAGFG--LVPSNSLLSKSSSFMNC 303

Query: 529  KNYGSSIDLNGGESQTKHPFRHFIDDWPKNKSDNSAC--------TDQTQLXXXXXXXXX 684
            +N+                     DDWPKN+SD +A         +D+TQL         
Sbjct: 304  RNF---------------------DDWPKNQSDRTAISWPDIDLQSDRTQLSISIPMA-- 340

Query: 685  XXXXXXXXXMREKPNPTQLSGSHEFNPIQMSLGVGSNPNEQTRRPANLLPISWETSMGGP 864
                            +    S EF+PIQM LGVGS  NE  +R AN +PISWETSMGGP
Sbjct: 341  ---------------SSDFILSREFDPIQMGLGVGSVLNEPNQRQANWIPISWETSMGGP 385

Query: 865  LGEALNKTNRTAIEYKSSVPAFDFITKGWNTSSQMGSSPTGVLQRTPFXXXXXXXXXXXX 1044
            LGE L+ TN    + K+S  A + +T+GW+ S ++GSSPTGVLQ+T F            
Sbjct: 386  LGEVLHSTNNNGGDCKNS-SALNLMTEGWDGSPRLGSSPTGVLQKTSFGSLSNSSAGSSP 444

Query: 1045 REETKNV-DEDSFCNDFLVGF*TLNSWAMDNL 1137
            R   K   D  S CND L+G   +NS ++ +L
Sbjct: 445  RAGNKKTNDGASLCND-LLGSTLVNSSSLPSL 475


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