BLASTX nr result

ID: Coptis25_contig00025026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025026
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262831.1| PREDICTED: blue copper protein [Vitis vinife...   144   2e-32
ref|NP_001237874.1| uncharacterized protein LOC100305865 precurs...   143   4e-32
gb|AFK46705.1| unknown [Lotus japonicus]                              140   4e-31
ref|XP_002298616.1| predicted protein [Populus trichocarpa] gi|2...   139   6e-31
ref|XP_002509536.1| Blue copper protein precursor, putative [Ric...   134   2e-29

>ref|XP_002262831.1| PREDICTED: blue copper protein [Vitis vinifera]
           gi|296090231|emb|CBI40050.3| unnamed protein product
           [Vitis vinifera]
          Length = 176

 Score =  144 bits (362), Expect = 2e-32
 Identities = 69/124 (55%), Positives = 90/124 (72%), Gaps = 5/124 (4%)
 Frame = -1

Query: 738 MKAVYKIL-LVIYLALGATEVLATQHVVT----WDVSTDLNSWASGRTFKVGDQLVFKYM 574
           M+ +Y++L  ++ + L   + LATQHVV     WD S+D + WASG+TF+VGDQLVFKY 
Sbjct: 1   MEGLYRVLSALVVVGLLTNKALATQHVVGGSQGWDESSDYSKWASGQTFEVGDQLVFKYT 60

Query: 573 KGLHXXXXXXXXXEYKNCNIGNAADSKNGGNDVVKLTKPGTRYFACGTLGHCDQGMKLKI 394
            GLH          YKNC++G+A +S N GN+VVKL+K GTRYFACGT+GHCDQGMKLK+
Sbjct: 61  PGLHSVVELPNESAYKNCDVGSALNSMNSGNNVVKLSKAGTRYFACGTIGHCDQGMKLKV 120

Query: 393 KTVA 382
            TV+
Sbjct: 121 STVS 124


>ref|NP_001237874.1| uncharacterized protein LOC100305865 precursor [Glycine max]
           gi|255626823|gb|ACU13756.1| unknown [Glycine max]
          Length = 162

 Score =  143 bits (360), Expect = 4e-32
 Identities = 72/117 (61%), Positives = 83/117 (70%), Gaps = 4/117 (3%)
 Frame = -1

Query: 720 ILLVIYLALGATEVLATQHVVT----WDVSTDLNSWASGRTFKVGDQLVFKYMKGLHXXX 553
           I L + + L   E +A QHVV     WD STD NSW SG+TFKVGDQLVFKY   LH   
Sbjct: 7   IFLALVVTLITKETMAEQHVVGGSQGWDESTDFNSWVSGQTFKVGDQLVFKY-SSLHSVV 65

Query: 552 XXXXXXEYKNCNIGNAADSKNGGNDVVKLTKPGTRYFACGTLGHCDQGMKLKIKTVA 382
                 EYKNC++GNA +S + GNDVVKL KPGTRYFACGT+GHCDQGMK+KI TV+
Sbjct: 66  ELGSESEYKNCDLGNAVNSMSSGNDVVKLNKPGTRYFACGTMGHCDQGMKVKITTVS 122


>gb|AFK46705.1| unknown [Lotus japonicus]
          Length = 162

 Score =  140 bits (352), Expect = 4e-31
 Identities = 68/115 (59%), Positives = 80/115 (69%), Gaps = 4/115 (3%)
 Frame = -1

Query: 720 ILLVIYLALGATEVLATQHVVT----WDVSTDLNSWASGRTFKVGDQLVFKYMKGLHXXX 553
           I L + ++L   E LA QHVV     WD STD NSW SG+TF VGDQLVFKY  GLH   
Sbjct: 7   IFLALVVSLITKEALAEQHVVGGSQGWDQSTDFNSWVSGKTFNVGDQLVFKYSSGLHSVV 66

Query: 552 XXXXXXEYKNCNIGNAADSKNGGNDVVKLTKPGTRYFACGTLGHCDQGMKLKIKT 388
                 +YKNC+IG+A ++ + GND VKL+KPGTRYFACGT GHC QGMK+KI T
Sbjct: 67  ELGSESDYKNCDIGSAVNTMSSGNDAVKLSKPGTRYFACGTSGHCSQGMKVKITT 121


>ref|XP_002298616.1| predicted protein [Populus trichocarpa] gi|222845874|gb|EEE83421.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score =  139 bits (350), Expect = 6e-31
 Identities = 67/112 (59%), Positives = 80/112 (71%), Gaps = 4/112 (3%)
 Frame = -1

Query: 717 LLVIYLALGATEVLATQHVVT----WDVSTDLNSWASGRTFKVGDQLVFKYMKGLHXXXX 550
           L+++++AL   E +A QHVV     W+ STD +SWASG+ FKVGDQLVFKY  GLH    
Sbjct: 1   LVLVFVALITKEAMAAQHVVGGSQGWEESTDFSSWASGQKFKVGDQLVFKYTSGLHSVVE 60

Query: 549 XXXXXEYKNCNIGNAADSKNGGNDVVKLTKPGTRYFACGTLGHCDQGMKLKI 394
                 YK+C +G A +S N GNDVVKL KPGTRYFACGTLGHC QGMK+KI
Sbjct: 61  LGGESAYKSCGLGTALNSMNTGNDVVKLNKPGTRYFACGTLGHCGQGMKVKI 112


>ref|XP_002509536.1| Blue copper protein precursor, putative [Ricinus communis]
           gi|223549435|gb|EEF50923.1| Blue copper protein
           precursor, putative [Ricinus communis]
          Length = 166

 Score =  134 bits (337), Expect = 2e-29
 Identities = 65/114 (57%), Positives = 78/114 (68%), Gaps = 4/114 (3%)
 Frame = -1

Query: 717 LLVIYLALGATEVLATQHVVT----WDVSTDLNSWASGRTFKVGDQLVFKYMKGLHXXXX 550
           L++ ++AL   E +A QHVV     WD S D +SW S + FKVGDQL FKY  GLH    
Sbjct: 7   LMLFFVALFVKEGMAAQHVVGGSQGWDESADFSSWTSSKKFKVGDQLAFKYTSGLHSVVE 66

Query: 549 XXXXXEYKNCNIGNAADSKNGGNDVVKLTKPGTRYFACGTLGHCDQGMKLKIKT 388
                 YKNC++G+  DS + GNDVVKL+K GTRYFACGTLGHCDQGMK+KI T
Sbjct: 67  LASESAYKNCDLGSPLDSLSTGNDVVKLSKEGTRYFACGTLGHCDQGMKVKITT 120


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