BLASTX nr result
ID: Coptis25_contig00025021
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00025021
(733 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526813.1| conserved hypothetical protein [Ricinus comm... 96 3e-37
ref|XP_002325554.1| predicted protein [Populus trichocarpa] gi|2... 102 2e-35
ref|XP_003564741.1| PREDICTED: uncharacterized protein LOC100837... 96 2e-32
ref|XP_002458844.1| hypothetical protein SORBIDRAFT_03g041330 [S... 99 6e-30
tpg|DAA56602.1| TPA: hypothetical protein ZEAMMB73_557216 [Zea m... 99 1e-29
>ref|XP_002526813.1| conserved hypothetical protein [Ricinus communis]
gi|223533817|gb|EEF35548.1| conserved hypothetical
protein [Ricinus communis]
Length = 1420
Score = 96.3 bits (238), Expect(2) = 3e-37
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = -3
Query: 287 FKKKGWVCNEFGRIWLQRKDIERAELAFADAVKALKEVFDHTNIILINCNLGHGRRALAE 108
FKK GWVCNE GR L+R+++ +AELAFADA+ A ++V D++NIILINCNLGHGRRALAE
Sbjct: 1033 FKKIGWVCNELGRNRLERRELTKAELAFADAITAFRKVSDYSNIILINCNLGHGRRALAE 1092
Query: 107 EMGSK 93
E SK
Sbjct: 1093 ETVSK 1097
Score = 85.5 bits (210), Expect(2) = 3e-37
Identities = 47/103 (45%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = -1
Query: 583 ANTQSSIVDKMYTVERTTLDTNHRRHDGTSEMHESTMSTKSDDGT-KEVSNGRIGGILKF 407
A S +VD + + + G+ EMHE M + T KE+ + GGI K+
Sbjct: 933 AKKASEMVDNDLKINSSAPANSDNGQQGSFEMHEGFMVPCRNQATSKEIPKVKSGGIFKY 992
Query: 406 LKGPIAGDTDYNLSVALSCYNAVRKALAGLQTGSAELQSVLKK 278
L+ + GD +YNLS+ALSCY RKALAGL TGSAELQSV KK
Sbjct: 993 LRDFVVGDVEYNLSIALSCYEEARKALAGLPTGSAELQSVFKK 1035
>ref|XP_002325554.1| predicted protein [Populus trichocarpa] gi|222862429|gb|EEE99935.1|
predicted protein [Populus trichocarpa]
Length = 1171
Score = 102 bits (253), Expect(2) = 2e-35
Identities = 49/70 (70%), Positives = 57/70 (81%)
Frame = -3
Query: 284 KKKGWVCNEFGRIWLQRKDIERAELAFADAVKALKEVFDHTNIILINCNLGHGRRALAEE 105
KK GWVCNE GR L+ K++ +AELAFADA+ A +EV DH NIILINCNLGHGRRALAEE
Sbjct: 784 KKIGWVCNEMGRNRLEGKELNKAELAFADAIDAFREVSDHANIILINCNLGHGRRALAEE 843
Query: 104 MGSKLEHTYS 75
M SK+E+ S
Sbjct: 844 MVSKMENLKS 853
Score = 73.6 bits (179), Expect(2) = 2e-35
Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Frame = -1
Query: 730 GAVHALACGRK---KSNVKKSSLLALGTEDEHPNLGVRDV-----NGSDCAYLNK*DANT 575
G H++A GRK +S+ K ++ +G D+ G R N + L + D +T
Sbjct: 626 GDKHSVAYGRKHSKRSHAKGATYSLMGDSDDG---GARHKEKSRKNSGEYPQLGRGDNDT 682
Query: 574 ---QSSIVDKMYTVERTTLDTNHRRHDGTSEMHE--STMSTKSDDGTKEVSNGRIGGILK 410
S I + + + D N +G E + S + ++S+ +KE GGI K
Sbjct: 683 GIEASGIAVDKHEIN-SLADANSDVLEGGLETLDAGSILPSQSETTSKEKPKPIKGGIFK 741
Query: 409 FLKGPIAGDTDYNLSVALSCYNAVRKALAGLQTGSAELQSVLKK 278
++ P D ++NLS ALSCY RKAL+GL TGSAELQSV+KK
Sbjct: 742 YISNPAVRDAEFNLSAALSCYQEARKALSGLPTGSAELQSVIKK 785
>ref|XP_003564741.1| PREDICTED: uncharacterized protein LOC100837056 [Brachypodium
distachyon]
Length = 1407
Score = 96.3 bits (238), Expect(2) = 2e-32
Identities = 43/70 (61%), Positives = 56/70 (80%)
Frame = -3
Query: 296 SVCFKKKGWVCNEFGRIWLQRKDIERAELAFADAVKALKEVFDHTNIILINCNLGHGRRA 117
S KK+GW NE GRI L+ +++ AE+AFADA++A +EV DHTN+ILINCNLGHGRRA
Sbjct: 1036 STILKKRGWAFNELGRIRLESRNLSGAEIAFADAIRAFQEVSDHTNVILINCNLGHGRRA 1095
Query: 116 LAEEMGSKLE 87
LAE++ S+ E
Sbjct: 1096 LAEKLASRAE 1105
Score = 68.9 bits (167), Expect(2) = 2e-32
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Frame = -1
Query: 700 KKSNVKKS--SLLALGTED-EHPNLGVRDVNGSDCAYLNK*DANTQSSIVDKMYTVERTT 530
KK N K S SL A TE E+PN V GS+ TQ+S D V + +
Sbjct: 910 KKKNRKSSVRSLRAQPTETKENPNPHGA-VEGSE---------ETQNSTNDTC--VGKNS 957
Query: 529 LDTNHRRHDGTSEMHESTMSTKSDDGTKEVSNGRIGGILKFLKGPIAGDTDYNLSVALSC 350
+ HD T E S +D +++S+ R GGI KFL GP GD +YNL A+ C
Sbjct: 958 VANAEFDHDHTIESQSSNADGIADKSDEDISSVREGGIFKFLGGPKPGDIEYNLCSAIHC 1017
Query: 349 YNAVRKALAGLQTGSAELQSVLKKK 275
Y A + A+ L SAEL ++LKK+
Sbjct: 1018 YGAAKGAMFALPALSAELSTILKKR 1042
>ref|XP_002458844.1| hypothetical protein SORBIDRAFT_03g041330 [Sorghum bicolor]
gi|241930819|gb|EES03964.1| hypothetical protein
SORBIDRAFT_03g041330 [Sorghum bicolor]
Length = 1404
Score = 98.6 bits (244), Expect(2) = 6e-30
Identities = 45/71 (63%), Positives = 57/71 (80%)
Frame = -3
Query: 299 TSVCFKKKGWVCNEFGRIWLQRKDIERAELAFADAVKALKEVFDHTNIILINCNLGHGRR 120
TS KK+GW NE GR L+ +++ AE+AFADA+KA +EVFDHTN+ILINCNLGHGRR
Sbjct: 1030 TSTVLKKRGWAFNELGRCRLECRNLGSAEIAFADAIKAFQEVFDHTNVILINCNLGHGRR 1089
Query: 119 ALAEEMGSKLE 87
ALAEE S+++
Sbjct: 1090 ALAEECVSRID 1100
Score = 58.5 bits (140), Expect(2) = 6e-30
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Frame = -1
Query: 556 KMYTVERTTLDTNHRRHDGTSEMHESTMS-TKSDDGTKEVSNGRI-----GGILKFLKGP 395
K + V T ++ N +D ++ + +++ DG E S + GGI KFL GP
Sbjct: 938 KQHDVNDTCIENNPVLNDDVGHYSQARENQSRNVDGVPEKSQASVPTVRDGGIFKFLGGP 997
Query: 394 IAGDTDYNLSVALSCYNAVRKALAGLQTGSAELQSVLKKK 275
GD +YNLS A+ CY A + AL S E +VLKK+
Sbjct: 998 KPGDIEYNLSSAIHCYGAAKGALYAFPVHSVETSTVLKKR 1037
>tpg|DAA56602.1| TPA: hypothetical protein ZEAMMB73_557216 [Zea mays]
Length = 1406
Score = 99.0 bits (245), Expect(2) = 1e-29
Identities = 45/71 (63%), Positives = 58/71 (81%)
Frame = -3
Query: 299 TSVCFKKKGWVCNEFGRIWLQRKDIERAELAFADAVKALKEVFDHTNIILINCNLGHGRR 120
TS+ KK+GW NE GR L+ +++ AE+AFADA+KA +EVFDHTN+ILINCNLGHGRR
Sbjct: 1033 TSMVLKKRGWGFNELGRCRLENRNLVSAEIAFADAIKAFEEVFDHTNVILINCNLGHGRR 1092
Query: 119 ALAEEMGSKLE 87
ALAEE S+++
Sbjct: 1093 ALAEECVSRID 1103
Score = 57.0 bits (136), Expect(2) = 1e-29
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Frame = -1
Query: 556 KMYTVERTTLDTNHRRHDGTSEMHESTMS-TKSDDGTKEVSNGRI-----GGILKFLKGP 395
K + V T ++ N +D ++ + +++ DG + S + GGI KFL GP
Sbjct: 941 KQHDVNDTCIENNSVLNDDIGHYSQARENQSRNVDGVPDKSQASVPTVRDGGIFKFLGGP 1000
Query: 394 IAGDTDYNLSVALSCYNAVRKALAGLQTGSAELQSVLKKK 275
GD +YNLS A+ CY A + AL S E VLKK+
Sbjct: 1001 KPGDVEYNLSSAIHCYGAAKGALFAFPVHSVETSMVLKKR 1040