BLASTX nr result

ID: Coptis25_contig00025013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025013
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238163.1| uncharacterized protein LOC100306650 [Glycin...   207   7e-52
gb|AFK37854.1| unknown [Lotus japonicus] gi|388509712|gb|AFK4292...   207   9e-52
ref|XP_002264373.1| PREDICTED: macrophage migration inhibitory f...   206   2e-51
ref|XP_003610049.1| Macrophage migration inhibitory factor-like ...   203   1e-50
ref|XP_002527710.1| light-inducible protein atls1, putative [Ric...   202   2e-50

>ref|NP_001238163.1| uncharacterized protein LOC100306650 [Glycine max]
           gi|255629183|gb|ACU14936.1| unknown [Glycine max]
          Length = 115

 Score =  207 bits (527), Expect = 7e-52
 Identities = 104/115 (90%), Positives = 110/115 (95%)
 Frame = +1

Query: 40  MPTLNLYTNLPVDAVVASDILRDATKAVAKIIGKPESYVMILLNQGVPIAFAGTEEPAAY 219
           MPTL+L+TN+PVD VVASDILRDATKAVAKIIGKPESYVMILLN GVPIAFAGTEEPAAY
Sbjct: 1   MPTLDLFTNVPVDTVVASDILRDATKAVAKIIGKPESYVMILLNGGVPIAFAGTEEPAAY 60

Query: 220 GELISIGGLGPSVNGKLSATIAEILEAKLSLDSSRFYIKFYDAERSFFGFNGSTF 384
           GELISIGGLGPSVNGKLS+TIAEILE KL +DSSRFYIKFYD +RSFFGFNGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILETKLYIDSSRFYIKFYDVQRSFFGFNGSTF 115


>gb|AFK37854.1| unknown [Lotus japonicus] gi|388509712|gb|AFK42922.1| unknown
           [Lotus japonicus]
          Length = 115

 Score =  207 bits (526), Expect = 9e-52
 Identities = 103/115 (89%), Positives = 109/115 (94%)
 Frame = +1

Query: 40  MPTLNLYTNLPVDAVVASDILRDATKAVAKIIGKPESYVMILLNQGVPIAFAGTEEPAAY 219
           MPTLNL+TN+PVDAVVASDILRDATKAVAKIIGKPESYVMILLN GVPIAF GTEEPAAY
Sbjct: 1   MPTLNLFTNIPVDAVVASDILRDATKAVAKIIGKPESYVMILLNGGVPIAFGGTEEPAAY 60

Query: 220 GELISIGGLGPSVNGKLSATIAEILEAKLSLDSSRFYIKFYDAERSFFGFNGSTF 384
           GELISIGGLGPSVNGKLS+TIAEIL+ KL +D SRFYIKFYD +RSFFGFNGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLYIDGSRFYIKFYDVQRSFFGFNGSTF 115


>ref|XP_002264373.1| PREDICTED: macrophage migration inhibitory factor homolog [Vitis
           vinifera] gi|297735476|emb|CBI17916.3| unnamed protein
           product [Vitis vinifera]
          Length = 115

 Score =  206 bits (524), Expect = 2e-51
 Identities = 101/115 (87%), Positives = 110/115 (95%)
 Frame = +1

Query: 40  MPTLNLYTNLPVDAVVASDILRDATKAVAKIIGKPESYVMILLNQGVPIAFAGTEEPAAY 219
           MPTLNL+TN+PVDAVVASDIL+D TKAVAKIIGKPESYVMILLN GVPI FAGTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDAVVASDILKDCTKAVAKIIGKPESYVMILLNGGVPIEFAGTEEPAAY 60

Query: 220 GELISIGGLGPSVNGKLSATIAEILEAKLSLDSSRFYIKFYDAERSFFGFNGSTF 384
           GELISIGGLGPSVNGKLS+TIAEI++ KLS+DS+RFY+KFYD ERSFFGFNGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEIIQTKLSIDSARFYVKFYDVERSFFGFNGSTF 115


>ref|XP_003610049.1| Macrophage migration inhibitory factor-like protein [Medicago
            truncatula] gi|355511104|gb|AES92246.1| Macrophage
            migration inhibitory factor-like protein [Medicago
            truncatula]
          Length = 855

 Score =  203 bits (517), Expect = 1e-50
 Identities = 101/121 (83%), Positives = 110/121 (90%)
 Frame = +1

Query: 22   GGNNKKMPTLNLYTNLPVDAVVASDILRDATKAVAKIIGKPESYVMILLNQGVPIAFAGT 201
            G  +  MPTLNL+TN+PVD V+ASDILRDATK VAKIIGKPESYVMILLN GVPIAF GT
Sbjct: 735  GLKDNAMPTLNLFTNIPVDPVIASDILRDATKVVAKIIGKPESYVMILLNGGVPIAFGGT 794

Query: 202  EEPAAYGELISIGGLGPSVNGKLSATIAEILEAKLSLDSSRFYIKFYDAERSFFGFNGST 381
            EEPAAYGELISIGGLGPSVN KLS+TIA+IL+ KL +DSSRFYIKFYD+ERSFFGFNGST
Sbjct: 795  EEPAAYGELISIGGLGPSVNAKLSSTIAQILQTKLYIDSSRFYIKFYDSERSFFGFNGST 854

Query: 382  F 384
            F
Sbjct: 855  F 855


>ref|XP_002527710.1| light-inducible protein atls1, putative [Ricinus communis]
           gi|223532900|gb|EEF34669.1| light-inducible protein
           atls1, putative [Ricinus communis]
          Length = 115

 Score =  202 bits (515), Expect = 2e-50
 Identities = 100/115 (86%), Positives = 109/115 (94%)
 Frame = +1

Query: 40  MPTLNLYTNLPVDAVVASDILRDATKAVAKIIGKPESYVMILLNQGVPIAFAGTEEPAAY 219
           MPTLNLYTN+PVDAV  SDIL+DAT+AV+KIIGKPESYVMILLN GVPIAFAGTEEPAAY
Sbjct: 1   MPTLNLYTNIPVDAVTTSDILKDATRAVSKIIGKPESYVMILLNGGVPIAFAGTEEPAAY 60

Query: 220 GELISIGGLGPSVNGKLSATIAEILEAKLSLDSSRFYIKFYDAERSFFGFNGSTF 384
           GELISIGGLG SVNGKLS+TIA+IL+ KLS+DSSRFYIKFYD +RSFFGFNGSTF
Sbjct: 61  GELISIGGLGASVNGKLSSTIADILQTKLSVDSSRFYIKFYDVQRSFFGFNGSTF 115


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