BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024996
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39682.3| unnamed protein product [Vitis vinifera]              119   5e-25
ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis v...    75   1e-11
ref|XP_002512592.1| flap endonuclease-1, putative [Ricinus commu...    74   2e-11
ref|XP_003567997.1| PREDICTED: flap endonuclease 1-A-like [Brach...    74   3e-11
gb|AFK37193.1| unknown [Lotus japonicus]                               72   1e-10

>emb|CBI39682.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  119 bits (298), Expect = 5e-25
 Identities = 63/111 (56%), Positives = 76/111 (68%)
 Frame = -1

Query: 648 ELLINFLVNENGFNHYRVTKAIENIKAAQNKYSHGPLQSIFQPVVSRALPLKIKETKCIL 469
           E LI FLVNENGFN  RVTKAIE IK A+NK S G L+S F+PVVS ++P+K KE+KC+L
Sbjct: 306 EGLITFLVNENGFNSDRVTKAIEKIKTAKNKSSQGRLESFFKPVVSSSIPIKRKESKCML 365

Query: 468 GAHRPFITPKNLSLQVSAHLRLKVFGCSVLPTLDTGSKLSGPFVRGVCFSA 316
           G+ +P I  K  + QV    R  + G S +PTL  GSK S P  RGVCF A
Sbjct: 366 GSPKPIIKHKIFTQQVCIQSRRYIIGSSSMPTLGLGSKHSTPLFRGVCFGA 416


>ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis vinifera]
          Length = 384

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/57 (66%), Positives = 45/57 (78%)
 Frame = -1

Query: 648 ELLINFLVNENGFNHYRVTKAIENIKAAQNKYSHGPLQSIFQPVVSRALPLKIKETK 478
           E LI FLVNENGFN  RVTKAIE IK A+NK S G L+S F+PVVS ++P+K KET+
Sbjct: 306 EGLITFLVNENGFNSDRVTKAIEKIKTAKNKSSQGRLESFFKPVVSSSIPIKRKETE 362


>ref|XP_002512592.1| flap endonuclease-1, putative [Ricinus communis]
           gi|223548553|gb|EEF50044.1| flap endonuclease-1,
           putative [Ricinus communis]
          Length = 345

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/56 (66%), Positives = 45/56 (80%)
 Frame = -1

Query: 648 ELLINFLVNENGFNHYRVTKAIENIKAAQNKYSHGPLQSIFQPVVSRALPLKIKET 481
           E LI FLVNENGFN+ RVTKAIE IKAA+NK S G L+S F+PV + ++P+K KET
Sbjct: 268 EGLITFLVNENGFNNDRVTKAIEKIKAAKNKSSQGRLESFFKPVANSSIPIKRKET 323


>ref|XP_003567997.1| PREDICTED: flap endonuclease 1-A-like [Brachypodium distachyon]
          Length = 380

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/56 (66%), Positives = 44/56 (78%)
 Frame = -1

Query: 648 ELLINFLVNENGFNHYRVTKAIENIKAAQNKYSHGPLQSIFQPVVSRALPLKIKET 481
           E L+NFLV ENGFN  RVTKAIE IK+A+NK S G L+S F+P VS ++PLK KET
Sbjct: 304 EGLVNFLVKENGFNQDRVTKAIEKIKSAKNKSSQGRLESFFKPTVSTSVPLKRKET 359


>gb|AFK37193.1| unknown [Lotus japonicus]
          Length = 366

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/56 (66%), Positives = 43/56 (76%)
 Frame = -1

Query: 648 ELLINFLVNENGFNHYRVTKAIENIKAAQNKYSHGPLQSIFQPVVSRALPLKIKET 481
           E LI FLVNENGFN  RVTKAIE IKAA+NK S G L+S F+P  S ++P+K KET
Sbjct: 290 EGLITFLVNENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPAPSSSVPIKRKET 345