BLASTX nr result

ID: Coptis25_contig00024995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024995
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266963.1| PREDICTED: plastid division protein PDV1-lik...   309   9e-82
emb|CBI22558.3| unnamed protein product [Vitis vinifera]              308   2e-81
ref|XP_002331822.1| predicted protein [Populus trichocarpa] gi|2...   305   1e-80
ref|XP_002318370.1| predicted protein [Populus trichocarpa] gi|2...   302   9e-80
gb|ABK94742.1| unknown [Populus trichocarpa]                          300   6e-79

>ref|XP_002266963.1| PREDICTED: plastid division protein PDV1-like [Vitis vinifera]
          Length = 277

 Score =  309 bits (791), Expect = 9e-82
 Identities = 169/278 (60%), Positives = 208/278 (74%), Gaps = 2/278 (0%)
 Frame = -3

Query: 977 EMETSEEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKTDDIFFTDKSNKSRDRS 798
           EME  EEIEA+LEKIWD+HDKLSDAIHSISR HFLN++K+L+K+D    +   N   +  
Sbjct: 4   EMEI-EEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDK---SKPLNDVDENR 59

Query: 797 SGYVFMKDVRMVADESAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAERDAAIARLE 618
            G+V+ KD R+  D+ AI EAKSLNAIRTALENLEDQLEFFHTVQ+ Q+AERDAAIARLE
Sbjct: 60  FGFVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIARLE 119

Query: 617 QSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSGDISKSHER 438
           QSRIVLA+RL++HHGKKYKVIEEA+AFVGDV++AG F+ P+NLF  P S  G     HE 
Sbjct: 120 QSRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAPHEE 179

Query: 437 KRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSRNSFVVESP 258
           KRS+ L++VL S F F K+SL L+ MGG+LG+AALVAVSM ALL   QV+ ++  V+E P
Sbjct: 180 KRSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVLEPP 239

Query: 257 QMEGDIFYGKSS--KISQREVSSSNGFVKNLDVLAARG 150
           Q   D  Y   +  + S+ E SS +  +  LDVL ARG
Sbjct: 240 QKREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 277


>emb|CBI22558.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  308 bits (789), Expect = 2e-81
 Identities = 166/273 (60%), Positives = 205/273 (75%), Gaps = 2/273 (0%)
 Frame = -3

Query: 962 EEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKTDDIFFTDKSNKSRDRSSGYVF 783
           EEIEA+LEKIWD+HDKLSDAIHSISR HFLN++K+L+K+D    +   N   +   G+V+
Sbjct: 4   EEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDK---SKPLNDVDENRFGFVY 60

Query: 782 MKDVRMVADESAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAERDAAIARLEQSRIV 603
            KD R+  D+ AI EAKSLNAIRTALENLEDQLEFFHTVQ+ Q+AERDAAIARLEQSRIV
Sbjct: 61  AKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIARLEQSRIV 120

Query: 602 LAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSGDISKSHERKRSSI 423
           LA+RL++HHGKKYKVIEEA+AFVGDV++AG F+ P+NLF  P S  G     HE KRS+ 
Sbjct: 121 LAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAPHEEKRSNF 180

Query: 422 LMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSRNSFVVESPQMEGD 243
           L++VL S F F K+SL L+ MGG+LG+AALVAVSM ALL   QV+ ++  V+E PQ   D
Sbjct: 181 LIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVLEPPQKRED 240

Query: 242 IFYGKSS--KISQREVSSSNGFVKNLDVLAARG 150
             Y   +  + S+ E SS +  +  LDVL ARG
Sbjct: 241 NIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 273


>ref|XP_002331822.1| predicted protein [Populus trichocarpa] gi|222875060|gb|EEF12191.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  305 bits (781), Expect = 1e-80
 Identities = 170/281 (60%), Positives = 211/281 (75%), Gaps = 10/281 (3%)
 Frame = -3

Query: 962 EEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKTD-------DIFFTDKSNKSRD 804
           EEIEAVLEKIWD+HDKLSDAIHSISRSHFL+++K+LK  +       D+ F + +N    
Sbjct: 4   EEIEAVLEKIWDLHDKLSDAIHSISRSHFLSSIKSLKTNNKKLNSESDVGFEENNNS--- 60

Query: 803 RSSGYVFMKDVRMVADE-SAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAERDAAIA 627
           R+SG+VF+KD  +  ++ SAI EAKSLN+IRTALENLEDQLEFFHTVQ+ QRAERDAAIA
Sbjct: 61  RASGFVFVKDFGVHDNDLSAIQEAKSLNSIRTALENLEDQLEFFHTVQIHQRAERDAAIA 120

Query: 626 RLEQSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSGDISKS 447
           RLEQSRI+LA+RLA+HHGKKYKVIEEALAFVGDV +A RF+S ENL+ SP S SG+    
Sbjct: 121 RLEQSRIILAVRLAEHHGKKYKVIEEALAFVGDVNDASRFVSRENLYGSPTSPSGENLVR 180

Query: 446 HERKRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSRNSFVV 267
           HE K  + +++VL SSF FAK+SL L+ MGG+LG+AAL  VSM A+L   QV+ +     
Sbjct: 181 HEGKGPNTVIKVLLSSFEFAKKSLKLDLMGGILGNAALFTVSMIAMLHLHQVAYK----- 235

Query: 266 ESPQMEGDIFYG--KSSKISQREVSSSNGFVKNLDVLAARG 150
           + P  + D+ Y      K+S  E SSSNG + +LDVL ARG
Sbjct: 236 DHPNKQEDLLYSNRNGKKVSGLEGSSSNGSLNHLDVLLARG 276


>ref|XP_002318370.1| predicted protein [Populus trichocarpa] gi|222859043|gb|EEE96590.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  302 bits (774), Expect = 9e-80
 Identities = 167/284 (58%), Positives = 211/284 (74%), Gaps = 13/284 (4%)
 Frame = -3

Query: 962 EEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKT-----------DDIFFTDKSN 816
           EEIEAVLEKIWD+HDKLSDAIHSISRSHFL+++K+LK T           +D+ F D ++
Sbjct: 8   EEIEAVLEKIWDLHDKLSDAIHSISRSHFLHSIKSLKTTTTTTNKKLNNENDVGFEDNNS 67

Query: 815 KSRDRSSGYVFMKDVRMVADE-SAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAERD 639
            S +R+SG+VF KD R+  ++ S I EAKSLN+IRTALENLEDQLEFFHTVQ+ QRAE D
Sbjct: 68  NSNNRASGFVFFKDFRVDGNDLSTIQEAKSLNSIRTALENLEDQLEFFHTVQIHQRAEID 127

Query: 638 AAIARLEQSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSGD 459
           AAIARLEQSRI+LAMRLA+HHGKKYKVIEEALAFVGDV +A  F+SPENL+ SP S  G+
Sbjct: 128 AAIARLEQSRIILAMRLAEHHGKKYKVIEEALAFVGDVHDASHFVSPENLYGSPTSPLGE 187

Query: 458 ISKSHERKRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSRN 279
                E KR + +++VL SSF FAK+SL L+ +GG+LG+AAL  VSM A+L   QV+  +
Sbjct: 188 NLIRREGKRPNTVIKVLLSSFEFAKKSLKLDHVGGLLGNAALFTVSMIAMLHLHQVAHNH 247

Query: 278 SFVVESPQMEGDIFYGKSSKIS-QREVSSSNGFVKNLDVLAARG 150
                 P  + D++  ++ K +   E SSSNG + +LDV+ ARG
Sbjct: 248 -----HPYKQEDLYSDRNGKKAFGLEGSSSNGSLDHLDVMLARG 286


>gb|ABK94742.1| unknown [Populus trichocarpa]
          Length = 286

 Score =  300 bits (767), Expect = 6e-79
 Identities = 166/284 (58%), Positives = 209/284 (73%), Gaps = 13/284 (4%)
 Frame = -3

Query: 962 EEIEAVLEKIWDIHDKLSDAIHSISRSHFLNTVKTLKKT-----------DDIFFTDKSN 816
           EEIEAVLEKIWD+HDKLSDAIHSISRSHFL+++K+LK             +D+ F D ++
Sbjct: 8   EEIEAVLEKIWDLHDKLSDAIHSISRSHFLHSIKSLKTNTTTTNKKLNNENDVGFEDNNS 67

Query: 815 KSRDRSSGYVFMKDVRMVADE-SAIAEAKSLNAIRTALENLEDQLEFFHTVQLQQRAERD 639
            S +R+SG+VF KD R+  ++ S I EAKSLN+IRTALENLEDQLEFFHTVQ+ QRAE D
Sbjct: 68  NSNNRASGFVFFKDFRVDGNDLSTIQEAKSLNSIRTALENLEDQLEFFHTVQIHQRAEID 127

Query: 638 AAIARLEQSRIVLAMRLADHHGKKYKVIEEALAFVGDVQNAGRFISPENLFESPRSQSGD 459
           AAIARLEQSRI+LAMRLA+HHGKKYKVIEEALAFVGDV +A  F+SPENL+ SP S  G+
Sbjct: 128 AAIARLEQSRIILAMRLAEHHGKKYKVIEEALAFVGDVHDASHFVSPENLYGSPTSPLGE 187

Query: 458 ISKSHERKRSSILMRVLSSSFTFAKRSLNLEQMGGVLGHAALVAVSMFALLQFQQVSSRN 279
                E KR + ++ VL SSF FAK+SL L+ +GG+LG+AAL  VSM A+L   QV+  +
Sbjct: 188 NLIRREGKRPNTVINVLLSSFEFAKKSLKLDHVGGLLGNAALFTVSMIAMLHLHQVAHNH 247

Query: 278 SFVVESPQMEGDIFYGKSSKIS-QREVSSSNGFVKNLDVLAARG 150
                 P  + D++  ++ K +   E SSSNG + +LDV+ ARG
Sbjct: 248 -----HPYKQEDLYSDRNGKKAFGLEGSSSNGSLDHLDVMLARG 286


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