BLASTX nr result
ID: Coptis25_contig00024993
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024993 (324 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003536185.1| PREDICTED: PHD finger protein At1g33420-like... 69 4e-10 ref|XP_003555537.1| PREDICTED: PHD finger protein At1g33420-like... 67 2e-09 ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like... 64 2e-08 ref|XP_004144350.1| PREDICTED: PHD finger protein At1g33420-like... 64 2e-08 ref|XP_003622362.1| PHD finger protein [Medicago truncatula] gi|... 63 3e-08 >ref|XP_003536185.1| PREDICTED: PHD finger protein At1g33420-like [Glycine max] Length = 707 Score = 68.9 bits (167), Expect = 4e-10 Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 3/66 (4%) Frame = -2 Query: 224 LSHLDYRKAVDCLSEIPLSLFYQARTPRTSLQDVITFYQALSECQLLTIKDLFCFLM--- 54 L+H Y+ AV+ LS +PLS F Q + P + +QD+I +YQ+LSE +L+ I+DLFCF+M Sbjct: 268 LTHESYKSAVESLSNLPLSTFSQGKMPDSRVQDMIKYYQSLSEHELVNIRDLFCFIMGLI 327 Query: 53 GPFHKT 36 G HKT Sbjct: 328 GDAHKT 333 >ref|XP_003555537.1| PREDICTED: PHD finger protein At1g33420-like [Glycine max] Length = 699 Score = 67.0 bits (162), Expect = 2e-09 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 3/66 (4%) Frame = -2 Query: 224 LSHLDYRKAVDCLSEIPLSLFYQARTPRTSLQDVITFYQALSECQLLTIKDLFCFLM--- 54 L+H Y+ AV+ LS +PLS F R P + ++D+I +YQ+LSE +L+ I+DLFCF+M Sbjct: 268 LTHEAYKSAVESLSNLPLSTFSHGRMPNSRVEDMIKYYQSLSEHELVNIRDLFCFIMGLI 327 Query: 53 GPFHKT 36 G HKT Sbjct: 328 GDAHKT 333 >ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like [Cucumis sativus] Length = 668 Score = 63.5 bits (153), Expect = 2e-08 Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Frame = -2 Query: 209 YRKAVDCLSEIPLSLFY-QARTPRTSLQDVITFYQALSECQLLTIKDLFCFLMGPFHKTK 33 Y+ AV+ LS +PLS+F Q R PR+ LQD+I +YQ+LSE +L+ ++DLF FLM H + Sbjct: 247 YKMAVETLSSLPLSIFTSQGRKPRSHLQDIILYYQSLSERKLVNVRDLFKFLMSLIHNVR 306 Query: 32 QLQITS 15 + T+ Sbjct: 307 KSSSTT 312 >ref|XP_004144350.1| PREDICTED: PHD finger protein At1g33420-like [Cucumis sativus] Length = 668 Score = 63.5 bits (153), Expect = 2e-08 Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Frame = -2 Query: 209 YRKAVDCLSEIPLSLFY-QARTPRTSLQDVITFYQALSECQLLTIKDLFCFLMGPFHKTK 33 Y+ AV+ LS +PLS+F Q R PR+ LQD+I +YQ+LSE +L+ ++DLF FLM H + Sbjct: 247 YKMAVETLSSLPLSIFTSQGRKPRSHLQDIILYYQSLSERKLVNVRDLFKFLMSLIHNVR 306 Query: 32 QLQITS 15 + T+ Sbjct: 307 KSSSTT 312 >ref|XP_003622362.1| PHD finger protein [Medicago truncatula] gi|355497377|gb|AES78580.1| PHD finger protein [Medicago truncatula] Length = 655 Score = 62.8 bits (151), Expect = 3e-08 Identities = 28/61 (45%), Positives = 45/61 (73%), Gaps = 1/61 (1%) Frame = -2 Query: 209 YRKAVDCLSEIPLSLFY-QARTPRTSLQDVITFYQALSECQLLTIKDLFCFLMGPFHKTK 33 Y+ AV+ LS +PLS+F Q + P + +QD+I +Y++LSE +L+ ++DLFCFLMG H + Sbjct: 222 YKSAVESLSNLPLSIFLSQEQKPHSRVQDMILYYRSLSEHELVNMRDLFCFLMGMLHDAR 281 Query: 32 Q 30 + Sbjct: 282 K 282