BLASTX nr result

ID: Coptis25_contig00024987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024987
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31761.3| unnamed protein product [Vitis vinifera]              133   4e-29
ref|XP_002279871.1| PREDICTED: uncharacterized protein LOC100242...   133   4e-29
emb|CAN65314.1| hypothetical protein VITISV_041340 [Vitis vinifera]   133   4e-29
ref|XP_002520382.1| conserved hypothetical protein [Ricinus comm...   128   9e-28
ref|XP_002302619.1| predicted protein [Populus trichocarpa] gi|2...   126   5e-27

>emb|CBI31761.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  133 bits (334), Expect = 4e-29
 Identities = 59/99 (59%), Positives = 76/99 (76%)
 Frame = -3

Query: 681 FPLTSSYLSDRIPGLDEAVSVSLFNLFREKGYIDENGYMRNDGRATQWKAALKTRKSLYS 502
           FPL+  +L+DRIPG+D+ +S  LF L R+KG+I+ NGYMRNDGRAT WK  L     ++ 
Sbjct: 214 FPLSPYFLADRIPGVDKNISAKLFGLLRDKGFINVNGYMRNDGRATNWKKVLSESNIIFP 273

Query: 501 DESEWIHHIQEELNLAYAFHEMTSLPTAQILNWFESHMS 385
           D   ++HHIQEELNLA+A+HEMTSL + QI NWFESHM+
Sbjct: 274 DWDIFVHHIQEELNLAFAYHEMTSLQSEQIFNWFESHMT 312


>ref|XP_002279871.1| PREDICTED: uncharacterized protein LOC100242074 [Vitis vinifera]
          Length = 346

 Score =  133 bits (334), Expect = 4e-29
 Identities = 59/99 (59%), Positives = 76/99 (76%)
 Frame = -3

Query: 681 FPLTSSYLSDRIPGLDEAVSVSLFNLFREKGYIDENGYMRNDGRATQWKAALKTRKSLYS 502
           FPL+  +L+DRIPG+D+ +S  LF L R+KG+I+ NGYMRNDGRAT WK  L     ++ 
Sbjct: 248 FPLSPYFLADRIPGVDKNISAKLFGLLRDKGFINVNGYMRNDGRATNWKKVLSESNIIFP 307

Query: 501 DESEWIHHIQEELNLAYAFHEMTSLPTAQILNWFESHMS 385
           D   ++HHIQEELNLA+A+HEMTSL + QI NWFESHM+
Sbjct: 308 DWDIFVHHIQEELNLAFAYHEMTSLQSEQIFNWFESHMT 346


>emb|CAN65314.1| hypothetical protein VITISV_041340 [Vitis vinifera]
          Length = 346

 Score =  133 bits (334), Expect = 4e-29
 Identities = 59/99 (59%), Positives = 76/99 (76%)
 Frame = -3

Query: 681 FPLTSSYLSDRIPGLDEAVSVSLFNLFREKGYIDENGYMRNDGRATQWKAALKTRKSLYS 502
           FPL+  +L+DRIPG+D+ +S  LF L R+KG+I+ NGYMRNDGRAT WK  L     ++ 
Sbjct: 248 FPLSPYFLADRIPGVDKNISAKLFGLLRDKGFINVNGYMRNDGRATNWKKVLSESNIIFP 307

Query: 501 DESEWIHHIQEELNLAYAFHEMTSLPTAQILNWFESHMS 385
           D   ++HHIQEELNLA+A+HEMTSL + QI NWFESHM+
Sbjct: 308 DWDIFVHHIQEELNLAFAYHEMTSLQSEQIFNWFESHMT 346


>ref|XP_002520382.1| conserved hypothetical protein [Ricinus communis]
           gi|223540429|gb|EEF41998.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 347

 Score =  128 bits (322), Expect = 9e-28
 Identities = 58/98 (59%), Positives = 76/98 (77%)
 Frame = -3

Query: 681 FPLTSSYLSDRIPGLDEAVSVSLFNLFREKGYIDENGYMRNDGRATQWKAALKTRKSLYS 502
           FPL+ S+L DRIPGLD+ +S  LF LF+ +G+ID+N YM+ DGRAT+WKAAL+  K    
Sbjct: 250 FPLSPSFLGDRIPGLDQTISAKLFELFQNRGFIDKNRYMKKDGRATRWKAALRETKDFVL 309

Query: 501 DESEWIHHIQEELNLAYAFHEMTSLPTAQILNWFESHM 388
           D++  + H+QEELNLA+A+HEMTSL + QI  WFESHM
Sbjct: 310 DKN-LVQHVQEELNLAFAYHEMTSLQSEQIFKWFESHM 346


>ref|XP_002302619.1| predicted protein [Populus trichocarpa] gi|222844345|gb|EEE81892.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  126 bits (316), Expect = 5e-27
 Identities = 57/99 (57%), Positives = 78/99 (78%)
 Frame = -3

Query: 681 FPLTSSYLSDRIPGLDEAVSVSLFNLFREKGYIDENGYMRNDGRATQWKAALKTRKSLYS 502
           FPL+ S+L+DRIPG+++ VS  LF LF+ K ++D NGYM+ DGRAT+WK AL+  K+L  
Sbjct: 224 FPLSPSFLADRIPGMNQTVSAKLFELFQVKSFVDGNGYMKKDGRATRWKEALRECKNLVL 283

Query: 501 DESEWIHHIQEELNLAYAFHEMTSLPTAQILNWFESHMS 385
           D+S  + H+QEELNLA+A+HEMTSL + QI  WFESH++
Sbjct: 284 DKS-MVQHVQEELNLAFAYHEMTSLQSEQIFKWFESHLN 321


Top